RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 TBC1D25Q3MII6 688 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 GGTA1PQ4G0N0 100 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 USP39Q53GS9 565 aaKnown RBP13.99□□□□□ -0.17
CD48-201ENST00000368045 ZC3H12BQ5HYM0 836 aaKnown RBP13.99□□□□□ -0.17
CD48-201ENST00000368045 C6orf141Q5SZD1 244 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 Q6ZNX1 250 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 MSANTD1Q6ZTZ1 278 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 FAM217AQ8IXS0 508 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 RNF168Q8IYW5 571 aaPredicted RBP13.99□□□□□ -0.17
CD48-201ENST00000368045 EID3Q8N140 333 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 NXPE1Q8N323 547 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 TCAIMQ8N3R3 496 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 ZCCHC7Q8N3Z6 543 aaKnown RBP13.99□□□□□ -0.17
CD48-201ENST00000368045 ZNF461Q8TAF7 563 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 PHF12Q96QT6 1004 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 OR52E6Q96RD3 313 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 CPPED1Q9BRF8 314 aaPredicted RBP13.99□□□□□ -0.17
CD48-201ENST00000368045 KCNH6Q9H252 994 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 ATP13A3Q9H7F0 1226 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 KAT8Q9H7Z6 458 aaKnown RBP13.99□□□□□ -0.17
CD48-201ENST00000368045 RMND5AQ9H871 391 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 GPN2Q9H9Y4 310 aaPredicted RBP13.99□□□□□ -0.17
CD48-201ENST00000368045 PALMDQ9NP74 551 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 SLC25A37Q9NYZ2 338 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 TSR3Q9UJK0 312 aaKnown RBP13.99□□□□□ -0.17
CD48-201ENST00000368045 C3orf18Q9UK00 162 aa13.99□□□□□ -0.17
CD48-201ENST00000368045 A0A1W2PPW3 197 aa13.98□□□□□ -0.17
CD48-201ENST00000368045 AGAP14A8MT82 685 aa13.98□□□□□ -0.17
CD48-201ENST00000368045 NPIPB8E9PQR5 432 aa13.98□□□□□ -0.17
CD48-201ENST00000368045 GNGT2O14610 69 aa13.98□□□□□ -0.17
CD48-201ENST00000368045 FFAR3O14843 346 aa13.98□□□□□ -0.17
CD48-201ENST00000368045 GPR42O15529 346 aa13.98□□□□□ -0.17
CD48-201ENST00000368045 CLDN9O95484 217 aa13.98□□□□□ -0.17
CD48-201ENST00000368045 PCNAP12004 261 aa13.98□□□□□ -0.17
CD48-201ENST00000368045 BCKDHAP12694 445 aa13.98□□□□□ -0.17
CD48-201ENST00000368045 BPIP17213 487 aa13.98□□□□□ -0.17
CD48-201ENST00000368045 RPL17P18621 184 aaKnown RBP13.98□□□□□ -0.17
CD48-201ENST00000368045 PRPH2P23942 346 aa13.98□□□□□ -0.17
CD48-201ENST00000368045 MAPK1P28482 360 aa13.98□□□□□ -0.17
CD48-201ENST00000368045 GGT5P36269 586 aa13.98□□□□□ -0.17
CD48-201ENST00000368045 YAP1P46937 504 aaKnown RBP13.98□□□□□ -0.17
CD48-201ENST00000368045 ALDH7A1P49419 539 aaKnown RBP13.98□□□□□ -0.17
CD48-201ENST00000368045 CLDN8P56748 225 aa13.98□□□□□ -0.17
CD48-201ENST00000368045 HMGCS1Q01581 520 aa13.98□□□□□ -0.17
CD48-201ENST00000368045 NKG7Q16617 165 aa13.98□□□□□ -0.17
CD48-201ENST00000368045 Q6ZNB5 142 aa13.98□□□□□ -0.17
CD48-201ENST00000368045 LRRC70Q7Z2Q7 622 aa13.98□□□□□ -0.17
CD48-201ENST00000368045 HIPK1Q86Z02 1210 aa13.98□□□□□ -0.17
CD48-201ENST00000368045 TMEM132CQ8N3T6 1108 aa13.98□□□□□ -0.17
CD48-201ENST00000368045 FAM86B1Q8N7N1 296 aa13.98□□□□□ -0.17
CD48-201ENST00000368045 ACDQ96AP0 544 aa13.98□□□□□ -0.17
CD48-201ENST00000368045 TBC1D20Q96BZ9 403 aa13.98□□□□□ -0.17
CD48-201ENST00000368045 ITCHQ96J02 903 aa13.98□□□□□ -0.17
CD48-201ENST00000368045 LYSMD1Q96S90 227 aa13.98□□□□□ -0.17
CD48-201ENST00000368045 CLSTN3Q9BQT9 956 aa13.98□□□□□ -0.17
CD48-201ENST00000368045 PAIP1Q9H074 479 aaKnown RBP13.98□□□□□ -0.17
CD48-201ENST00000368045 CXorf51AA0A1B0GTR3 108 aa13.97□□□□□ -0.17
CD48-201ENST00000368045 LOC730098B7Z3J9 87 aa13.97□□□□□ -0.17
CD48-201ENST00000368045 CREG1O75629 220 aa13.97□□□□□ -0.17
CD48-201ENST00000368045 PRKD3O94806 890 aa13.97□□□□□ -0.17
CD48-201ENST00000368045 INHBBP09529 407 aa13.97□□□□□ -0.17
CD48-201ENST00000368045 MAP4P27816 1152 aaKnown RBP13.97□□□□□ -0.17
CD48-201ENST00000368045 HNF1BP35680 557 aa13.97□□□□□ -0.17
CD48-201ENST00000368045 POLR2IP36954 125 aaKnown RBP13.97□□□□□ -0.17
CD48-201ENST00000368045 NSG1P42857 185 aa13.97□□□□□ -0.17
CD48-201ENST00000368045 GDF5P43026 501 aa13.97□□□□□ -0.17
CD48-201ENST00000368045 TPD52P55327 224 aaPredicted RBP13.97□□□□□ -0.17
CD48-201ENST00000368045 RPS14P62263 151 aaKnown RBP13.97□□□□□ -0.17
CD48-201ENST00000368045 PON2Q15165 354 aa13.97□□□□□ -0.17
CD48-201ENST00000368045 CHRNA6Q15825 494 aa13.97□□□□□ -0.17
CD48-201ENST00000368045 AAK1Q2M2I8 961 aa13.97□□□□□ -0.17
CD48-201ENST00000368045 FGD3Q5JSP0 725 aa13.97□□□□□ -0.17
CD48-201ENST00000368045 XAF1Q6GPH4 301 aa13.97□□□□□ -0.17
CD48-201ENST00000368045 KIAA1841Q6NSI8 718 aa13.97□□□□□ -0.17
CD48-201ENST00000368045 ELMSAN1Q6PJG2 1045 aa13.97□□□□□ -0.17
CD48-201ENST00000368045 TPGS1Q6ZTW0 290 aa13.97□□□□□ -0.17
CD48-201ENST00000368045 R3HCC1LQ7Z5L2 792 aaKnown RBP13.97□□□□□ -0.17
CD48-201ENST00000368045 ELMOD1Q8N336 334 aa13.97□□□□□ -0.17
CD48-201ENST00000368045 CLDN19Q8N6F1 224 aa13.97□□□□□ -0.17
CD48-201ENST00000368045 SMYD1Q8NB12 490 aa13.97□□□□□ -0.17
CD48-201ENST00000368045 CHDHQ8NE62 594 aaPredicted RBP13.97□□□□□ -0.17
CD48-201ENST00000368045 SNX19Q92543 992 aa13.97□□□□□ -0.17
CD48-201ENST00000368045 FAM120BQ96EK7 910 aaKnown RBP13.97□□□□□ -0.17
CD48-201ENST00000368045 CCDC97Q96F63 343 aaPredicted RBP13.97□□□□□ -0.17
CD48-201ENST00000368045 MAGEB10Q96LZ2 347 aaPredicted RBP13.97□□□□□ -0.17
CD48-201ENST00000368045 SLC32A1Q9H598 525 aa13.97□□□□□ -0.17
CD48-201ENST00000368045 IKZF5Q9H5V7 419 aa13.97□□□□□ -0.17
CD48-201ENST00000368045 FARSBQ9NSD9 589 aaKnown RBP13.97□□□□□ -0.17
CD48-201ENST00000368045 FAIMQ9NVQ4 179 aa13.97□□□□□ -0.17
CD48-201ENST00000368045 SRRDQ9UH36 339 aa13.97□□□□□ -0.17
CD48-201ENST00000368045 EVLQ9UI08 416 aaPredicted RBP13.97□□□□□ -0.17
CD48-201ENST00000368045 PDE10AQ9Y233 779 aa13.97□□□□□ -0.17
CD48-201ENST00000368045 TMED5Q9Y3A6 229 aa13.97□□□□□ -0.17
CD48-201ENST00000368045 ORC6Q9Y5N6 252 aa13.97□□□□□ -0.17
CD48-201ENST00000368045 hCG_2014768A0A024R1R8 64 aa13.96□□□□□ -0.17
CD48-201ENST00000368045 SERTM1A2A2V5 107 aa13.96□□□□□ -0.17
CD48-201ENST00000368045 WNT9AO14904 365 aa13.96□□□□□ -0.17
CD48-201ENST00000368045 GREM1O60565 184 aa13.96□□□□□ -0.17
CD48-201ENST00000368045 IGSF6O95976 241 aa13.96□□□□□ -0.17
CD48-201ENST00000368045 ZNF12P17014 697 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms