RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 CRYBG1Q9Y4K1 1723 aa11.37□□□□□ -0.59
SYNE1-204ENST00000367248 M0QZQ0 153 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 KERAO60938 352 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 CYP11A1P05108 521 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 ZC3HC1Q86WB0 502 aaKnown RBP11.36□□□□□ -0.59
SYNE1-204ENST00000367248 TP53INP1Q96A56 240 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 SIGLEC10Q96LC7 697 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 TEFMQ96QE5 360 aaKnown RBP11.36□□□□□ -0.59
SYNE1-204ENST00000367248 TDRD1Q9BXT4 1180 aaKnown RBP11.36□□□□□ -0.59
SYNE1-204ENST00000367248 USP29Q9HBJ7 922 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 WDR6Q9NNW5 1121 aaKnown RBP11.36□□□□□ -0.59
SYNE1-204ENST00000367248 SEC14L3Q9UDX4 400 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 AGPSO00116 658 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 KAT7O95251 611 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 TPP2P29144 1249 aaPredicted RBP11.36□□□□□ -0.59
SYNE1-204ENST00000367248 GLYATQ6IB77 296 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 RINLQ6ZS11 566 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 LIX1Q8N485 282 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 SLC38A2Q96QD8 506 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 KIFC1Q9BW19 673 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 AHSGP02765 367 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 ATP1B2P14415 290 aaPredicted RBP11.36□□□□□ -0.59
SYNE1-204ENST00000367248 IMPDH1P20839 514 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 WNT7BP56706 349 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 MRPL28Q13084 256 aaKnown RBP11.36□□□□□ -0.59
SYNE1-204ENST00000367248 DEPDC4Q8N2C3 294 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 AGAP11Q8TF27 550 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 STRADBQ9C0K7 418 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 C2orf71A6NGG8 1288 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 GIMD1P0DJR0 217 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 USP46P62068 366 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 KIAA2013Q8IYS2 634 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 IGSF8Q969P0 613 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 ADAP2Q9NPF8 381 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 CYTH4Q9UIA0 394 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 FAM170BA6NMN3 283 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 FAM227AF5H4B4 570 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 STC2O76061 302 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 POLR2CP19387 275 aaPredicted RBP11.36□□□□□ -0.59
SYNE1-204ENST00000367248 AHCYP23526 432 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 SERPINB1P30740 379 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 TCEAL8Q8IYN2 117 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 C11orf65Q8NCR3 313 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 RBM15BQ8NDT2 890 aaKnown RBP11.36□□□□□ -0.59
SYNE1-204ENST00000367248 ATOH1Q92858 354 aaPredicted RBP11.36□□□□□ -0.59
SYNE1-204ENST00000367248 DCBLD2Q96PD2 775 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 TUBGCP5Q96RT8 1024 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 CXorf49A8MYA2 514 aaPredicted RBP11.36□□□□□ -0.59
SYNE1-204ENST00000367248 MYOGP15173 224 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 PER3P56645 1201 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 CLLU1OSQ5K130 101 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 ZNF648Q5T619 568 aaPredicted RBP11.36□□□□□ -0.59
SYNE1-204ENST00000367248 PAOXQ6QHF9 649 aa11.36□□□□□ -0.59
SYNE1-204ENST00000367248 TFGQ92734 400 aaPredicted RBP11.36□□□□□ -0.59
SYNE1-204ENST00000367248 A8MT66 165 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 MAN2B1O00754 1011 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 KHNYNO15037 678 aaKnown RBP11.35□□□□□ -0.59
SYNE1-204ENST00000367248 PAPSS2O95340 614 aaPredicted RBP11.35□□□□□ -0.59
SYNE1-204ENST00000367248 LAMP2P13473 410 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 PRKD1Q15139 912 aaPredicted RBP11.35□□□□□ -0.59
SYNE1-204ENST00000367248 DPY19L1Q2PZI1 675 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 PUS10Q3MIT2 529 aaKnown RBP11.35□□□□□ -0.59
SYNE1-204ENST00000367248 GCNT6Q5T4J0 391 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 ANKLE1Q8NAG6 615 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 DCAKDQ8WVC6 231 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 CEP295NLQ96MC4 621 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 ZNF641Q96N77 438 aaPredicted RBP11.35□□□□□ -0.59
SYNE1-204ENST00000367248 YIPF4Q9BSR8 244 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 KCNN2Q9H2S1 579 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 GON4LQ3T8J9 2241 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.35□□□□□ -0.59
SYNE1-204ENST00000367248 LIN7AO14910 233 aaPredicted RBP11.35□□□□□ -0.59
SYNE1-204ENST00000367248 DCLK1O15075 740 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 TPST2O60704 377 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 ECI2O75521 394 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 GPX6P59796 221 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 IRF9Q00978 393 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 LMAN2Q12907 356 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 INAQ16352 499 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 DPY19L3Q6ZPD9 716 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 OR10H5Q8NGA6 315 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 FEM1AQ9BSK4 669 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 ZNF576Q9H609 170 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 TOR4AQ9NXH8 423 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 PCDH10Q9P2E7 1040 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 ADGRE2Q9UHX3 823 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 C4BP0C0L5 1744 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 NDUFS4O43181 175 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 LEFTY1O75610 366 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 SIX3O95343 332 aaPredicted RBP11.35□□□□□ -0.59
SYNE1-204ENST00000367248 IL6P05231 212 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 SAGP10523 405 aaPredicted RBP11.35□□□□□ -0.59
SYNE1-204ENST00000367248 ANPEPP15144 967 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 MAGEA10P43363 369 aaPredicted RBP11.35□□□□□ -0.59
SYNE1-204ENST00000367248 RUNX3Q13761 415 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 RBM20Q5T481 1227 aaKnown RBP11.35□□□□□ -0.59
SYNE1-204ENST00000367248 FAM91A1Q658Y4 838 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 ANKRD46Q86W74 232 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 TBC1D21Q8IYX1 336 aa11.35□□□□□ -0.59
SYNE1-204ENST00000367248 AVL9Q8NBF6 648 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms