RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 PER2O15055 1255 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 LSM1O15116 133 aaKnown RBP8.02□□□□□ -1.13
CD46-208ENST00000367042 SLC22A1O15245 554 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 RGS10O43665 173 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 LCKP06239 509 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 GTF2E2P29084 291 aaKnown RBP8.02□□□□□ -1.13
CD46-208ENST00000367042 S100A5P33763 92 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 GNPDA1P46926 289 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 NEK2P51955 445 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 FAM189BP81408 668 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 DAB2P98082 770 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 TUSC3Q13454 348 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 CTXN3Q4LDR2 81 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 DOK6Q6PKX4 331 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 SLC16A12Q6ZSM3 486 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 ZNF621Q6ZSS3 439 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 NANOGNBQ7Z5D8 188 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 DCP2Q8IU60 420 aaKnown RBP8.02□□□□□ -1.13
CD46-208ENST00000367042 TTC29Q8NA56 475 aaPredicted RBP8.02□□□□□ -1.13
CD46-208ENST00000367042 CD200R1Q8TD46 325 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 MUL1Q969V5 352 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 ZNF382Q96SR6 550 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 BARD1Q99728 777 aaKnown RBP8.02□□□□□ -1.13
CD46-208ENST00000367042 APOL4Q9BPW4 351 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 CORO1BQ9BR76 489 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 LRTM1Q9HBL6 345 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 KRT84Q9NSB2 600 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 AGO1Q9UL18 857 aaKnown RBP8.02□□□□□ -1.13
CD46-208ENST00000367042 VPS9D1Q9Y2B5 631 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 DYTNA2CJ06 578 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 INSIG1O15503 277 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 ASNA1O43681 348 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 NTRK1P04629 796 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 RHOCP08134 193 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 ALOX5P09917 674 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 COL6A1P12109 1028 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 JUNBP17275 347 aaPredicted RBP8.02□□□□□ -1.13
CD46-208ENST00000367042 ZFP36L2P47974 494 aaKnown RBP8.02□□□□□ -1.13
CD46-208ENST00000367042 RGS4P49798 205 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 CASP9P55211 416 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 ISL1P61371 349 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 IFITM3Q01628 133 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 ILF2Q12905 390 aaKnown RBP8.02□□□□□ -1.13
CD46-208ENST00000367042 GRIK2Q13002 908 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 CLCA4Q14CN2 919 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 KCNJ8Q15842 424 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 CTF1Q16619 201 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 INAVAQ3KP66 663 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 GPR153Q6NV75 609 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 PLEKHG7Q6ZR37 379 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 HIPK1Q86Z02 1210 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 DENND1CQ8IV53 801 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 CLIP4Q8N3C7 705 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 TMEM132CQ8N3T6 1108 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 AADATQ8N5Z0 425 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 SCAIQ8N9R8 606 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 PIK3C3Q8NEB9 887 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 UTP15Q8TED0 518 aaKnown RBP8.02□□□□□ -1.13
CD46-208ENST00000367042 FAR1Q8WVX9 515 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 SELENOMQ8WWX9 145 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 LGALS12Q96DT0 336 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 MROQ9BYG7 248 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 POPDC3Q9HBV1 291 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 ZBTB20Q9HC78 741 aaPredicted RBP8.02□□□□□ -1.13
CD46-208ENST00000367042 NLE1Q9NVX2 485 aaPredicted RBP8.02□□□□□ -1.13
CD46-208ENST00000367042 INTS6Q9UL03 887 aaKnown RBP8.02□□□□□ -1.13
CD46-208ENST00000367042 ZNF451Q9Y4E5 1061 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 PCDHB14Q9Y5E9 798 aa8.02□□□□□ -1.13
CD46-208ENST00000367042 TNPO3Q9Y5L0 923 aaKnown RBP8.02□□□□□ -1.13
CD46-208ENST00000367042 ZFP37Q9Y6Q3 630 aaPredicted RBP8.02□□□□□ -1.13
CD46-208ENST00000367042 TRIM64A6NGJ6 449 aa8.01□□□□□ -1.13
CD46-208ENST00000367042 RFXANKO14593 260 aa8.01□□□□□ -1.13
CD46-208ENST00000367042 PRAMEF11O60813 436 aa8.01□□□□□ -1.13
CD46-208ENST00000367042 ALPIP09923 528 aa8.01□□□□□ -1.13
CD46-208ENST00000367042 TACR2P21452 398 aa8.01□□□□□ -1.13
CD46-208ENST00000367042 NUDT6P53370 316 aa8.01□□□□□ -1.13
CD46-208ENST00000367042 PPP2R2BQ00005 443 aa8.01□□□□□ -1.13
CD46-208ENST00000367042 TSTA3Q13630 321 aaPredicted RBP8.01□□□□□ -1.13
CD46-208ENST00000367042 GRB14Q14449 540 aa8.01□□□□□ -1.13
CD46-208ENST00000367042 TAF12Q16514 161 aa8.01□□□□□ -1.13
CD46-208ENST00000367042 SPATS1Q496A3 300 aa8.01□□□□□ -1.13
CD46-208ENST00000367042 RSBN1Q5VWQ0 802 aaPredicted RBP8.01□□□□□ -1.13
CD46-208ENST00000367042 VTCN1Q7Z7D3 282 aa8.01□□□□□ -1.13
CD46-208ENST00000367042 ADAMTSL2Q86TH1 951 aa8.01□□□□□ -1.13
CD46-208ENST00000367042 AKAP14Q86UN6 197 aa8.01□□□□□ -1.13
CD46-208ENST00000367042 KLHDC8BQ8IXV7 354 aa8.01□□□□□ -1.13
CD46-208ENST00000367042 RAVER1Q8IY67 606 aaKnown RBP8.01□□□□□ -1.13
CD46-208ENST00000367042 ZNF548Q8NEK5 533 aaPredicted RBP8.01□□□□□ -1.13
CD46-208ENST00000367042 BRI3BPQ8WY22 251 aa8.01□□□□□ -1.13
CD46-208ENST00000367042 GTF2H4Q92759 462 aa8.01□□□□□ -1.13
CD46-208ENST00000367042 CEP19Q96LK0 163 aa8.01□□□□□ -1.13
CD46-208ENST00000367042 C1orf74Q96LT6 269 aa8.01□□□□□ -1.13
CD46-208ENST00000367042 EBPLQ9BY08 206 aa8.01□□□□□ -1.13
CD46-208ENST00000367042 ADGRE3Q9BY15 652 aa8.01□□□□□ -1.13
CD46-208ENST00000367042 ALOXE3Q9BYJ1 711 aa8.01□□□□□ -1.13
CD46-208ENST00000367042 DCSTAMPQ9H295 470 aa8.01□□□□□ -1.13
CD46-208ENST00000367042 ACTL8Q9H568 366 aa8.01□□□□□ -1.13
CD46-208ENST00000367042 ELOVL6Q9H5J4 265 aa8.01□□□□□ -1.13
CD46-208ENST00000367042 SIAEQ9HAT2 523 aa8.01□□□□□ -1.13
CD46-208ENST00000367042 TLR8Q9NR97 1041 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms