RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 ZNF648Q5T619 568 aaPredicted RBP12.88□□□□□ -0.35
SQSTM1-201ENST00000360718 B3GNT6Q6ZMB0 384 aa12.88□□□□□ -0.35
SQSTM1-201ENST00000360718 PHYKPLQ8IUZ5 450 aa12.88□□□□□ -0.35
SQSTM1-201ENST00000360718 ZNF687Q8N1G0 1237 aa12.88□□□□□ -0.35
SQSTM1-201ENST00000360718 PCYOX1LQ8NBM8 494 aa12.88□□□□□ -0.35
SQSTM1-201ENST00000360718 MAFAQ8NHW3 353 aaPredicted RBP12.88□□□□□ -0.35
SQSTM1-201ENST00000360718 RHEBL1Q8TAI7 183 aa12.88□□□□□ -0.35
SQSTM1-201ENST00000360718 STAG3L4Q8TBR4 150 aa12.88□□□□□ -0.35
SQSTM1-201ENST00000360718 HAUS8Q9BT25 410 aa12.88□□□□□ -0.35
SQSTM1-201ENST00000360718 CCDC167Q9P0B6 97 aa12.88□□□□□ -0.35
SQSTM1-201ENST00000360718 E7ENX8 843 aa12.88□□□□□ -0.35
SQSTM1-201ENST00000360718 MRASO14807 208 aa12.88□□□□□ -0.35
SQSTM1-201ENST00000360718 NRP2O60462 931 aa12.88□□□□□ -0.35
SQSTM1-201ENST00000360718 ETS2P15036 469 aa12.88□□□□□ -0.35
SQSTM1-201ENST00000360718 ITGB6P18564 788 aa12.88□□□□□ -0.35
SQSTM1-201ENST00000360718 DGKAP23743 735 aa12.88□□□□□ -0.35
SQSTM1-201ENST00000360718 GPR1P46091 355 aa12.88□□□□□ -0.35
SQSTM1-201ENST00000360718 NR1H2P55055 460 aa12.88□□□□□ -0.35
SQSTM1-201ENST00000360718 DPTQ07507 201 aa12.88□□□□□ -0.35
SQSTM1-201ENST00000360718 CRY1Q16526 586 aa12.88□□□□□ -0.35
SQSTM1-201ENST00000360718 C6orf52Q5T4I8 152 aa12.88□□□□□ -0.35
SQSTM1-201ENST00000360718 IL23RQ5VWK5 629 aa12.88□□□□□ -0.35
SQSTM1-201ENST00000360718 RBM44Q6ZP01 1051 aaKnown RBP12.88□□□□□ -0.35
SQSTM1-201ENST00000360718 CPNE9Q8IYJ1 553 aa12.88□□□□□ -0.35
SQSTM1-201ENST00000360718 ALDH16A1Q8IZ83 802 aa12.88□□□□□ -0.35
SQSTM1-201ENST00000360718 ZBTB2Q8N680 514 aa12.88□□□□□ -0.35
SQSTM1-201ENST00000360718 DDHD1Q8NEL9 900 aa12.88□□□□□ -0.35
SQSTM1-201ENST00000360718 ATP6V1E2Q96A05 226 aa12.88□□□□□ -0.35
SQSTM1-201ENST00000360718 KIAA1191Q96A73 305 aa12.88□□□□□ -0.35
SQSTM1-201ENST00000360718 OSBPL11Q9BXB4 747 aa12.88□□□□□ -0.35
SQSTM1-201ENST00000360718 C2orf42Q9NWW7 574 aa12.88□□□□□ -0.35
SQSTM1-201ENST00000360718 IKZF3Q9UKT9 509 aa12.88□□□□□ -0.35
SQSTM1-201ENST00000360718 RNF112Q9ULX5 631 aa12.88□□□□□ -0.35
SQSTM1-201ENST00000360718 DMTF1Q9Y222 760 aa12.88□□□□□ -0.35
SQSTM1-201ENST00000360718 KRBA1A5PL33 1030 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 SYCE1LA8MT33 242 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 AP2A2O94973 939 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 SLC7A1P30825 629 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 MYBPC1Q00872 1141 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 IRAK1BP1Q5VVH5 260 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 RAET1GQ6H3X3 334 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 IYDQ6PHW0 289 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 DET1Q7L5Y6 550 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 NLRP8Q86W28 1048 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 ADHFE1Q8IWW8 467 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 EEF1AKMT1Q8WVE0 214 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 ROPN1LQ96C74 230 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 NMD3Q96D46 503 aaKnown RBP12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 PHF21BQ96EK2 531 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 L3HYPDHQ96EM0 354 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 PDLIM5Q96HC4 596 aaKnown RBP12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 PRPF18Q99633 342 aaKnown RBP12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 ZCCHC2Q9C0B9 1178 aaKnown RBP12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 NCKAP1Q9Y2A7 1128 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 MUC3AQ02505 3323 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 CCDC160A6NGH7 325 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 BBIP1A8MTZ0 92 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 BTN3A1O00481 513 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 KPNA5O15131 536 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 INPP4BO15327 924 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 KERAO60938 352 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 CHRNB1P11230 501 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 ACADMP11310 421 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 ZNF26P17031 533 aaPredicted RBP12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 KCNC1P48547 511 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 TMEM259Q4ZIN3 620 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 PAOXQ6QHF9 649 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 ZNF852Q6ZMS4 543 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 RAB44Q7Z6P3 723 aaPredicted RBP12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 CLYBLQ8N0X4 340 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 MYO1HQ8N1T3 1032 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 FAM156AQ8NDB6 213 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 RNF217Q8TC41 542 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 EXT2Q93063 718 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 FAM131CQ96AQ9 280 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 PTERQ96BW5 349 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 SIPA1Q96FS4 1042 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 HIC2Q96JB3 615 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 MRGPRX1Q96LB2 322 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 LATS2Q9NRM7 1088 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 KLHL42Q9P2K6 505 aa12.87□□□□□ -0.35
SQSTM1-201ENST00000360718 IGLON5A6NGN9 336 aa12.86□□□□□ -0.35
SQSTM1-201ENST00000360718 FBP2O00757 339 aa12.86□□□□□ -0.35
SQSTM1-201ENST00000360718 SUPT7LO94864 414 aa12.86□□□□□ -0.35
SQSTM1-201ENST00000360718 OR6B1O95007 311 aa12.86□□□□□ -0.35
SQSTM1-201ENST00000360718 TSPAN12O95859 305 aa12.86□□□□□ -0.35
SQSTM1-201ENST00000360718 FTH1P02794 183 aa12.86□□□□□ -0.35
SQSTM1-201ENST00000360718 CDKL1Q00532 357 aa12.86□□□□□ -0.35
SQSTM1-201ENST00000360718 NADK2Q4G0N4 442 aa12.86□□□□□ -0.35
SQSTM1-201ENST00000360718 PRMT9Q6P2P2 845 aa12.86□□□□□ -0.35
SQSTM1-201ENST00000360718 BORAQ6PGQ7 559 aa12.86□□□□□ -0.35
SQSTM1-201ENST00000360718 FLCNQ8NFG4 579 aa12.86□□□□□ -0.35
SQSTM1-201ENST00000360718 OR14C36Q8NHC7 312 aa12.86□□□□□ -0.35
SQSTM1-201ENST00000360718 MPP4Q96JB8 637 aa12.86□□□□□ -0.35
SQSTM1-201ENST00000360718 ZNF597Q96LX8 424 aa12.86□□□□□ -0.35
SQSTM1-201ENST00000360718 GSTO2Q9H4Y5 243 aa12.86□□□□□ -0.35
SQSTM1-201ENST00000360718 TMEM181Q9P2C4 612 aa12.86□□□□□ -0.35
SQSTM1-201ENST00000360718 CD300AQ9UGN4 299 aa12.86□□□□□ -0.35
SQSTM1-201ENST00000360718 CNOT6Q9ULM6 557 aaKnown RBP12.86□□□□□ -0.35
SQSTM1-201ENST00000360718 MMP17Q9ULZ9 603 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms