RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 FER1L6Q2WGJ9 1857 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 CFL1P23528 166 aaKnown RBP9.14□□□□□ -0.95
VPS13A-203ENST00000360280 PRPF38BQ5VTL8 546 aaKnown RBP9.14□□□□□ -0.95
VPS13A-203ENST00000360280 ZSCAN5DPP0CG00 497 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 GKN3PP0CG01 181 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 CD72P21854 359 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 ITPKAP23677 461 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 PSEN2P49810 448 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 HERV-K104P61576 105 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 SLC13A2Q13183 592 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 MOB2Q70IA6 237 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 TMED4Q7Z7H5 227 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 AGBL3Q8NEM8 1001 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 IFT52Q9Y366 437 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 TOR1BO14657 336 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 HSPA12AO43301 675 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 CREB5Q02930 508 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 PTPN20Q4JDL3 420 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 HFE2Q6ZVN8 426 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 LIN37Q96GY3 246 aaPredicted RBP9.14□□□□□ -0.95
VPS13A-203ENST00000360280 MCCC2Q9HCC0 563 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 SSU72Q9NP77 194 aaKnown RBP9.14□□□□□ -0.95
VPS13A-203ENST00000360280 ARPC2O15144 300 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 FGF19O95750 216 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 ALPPP05187 535 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 ICAM3P32942 547 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 RTP1P59025 263 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 SLC25A52Q3SY17 297 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 REPS2Q8NFH8 660 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 BRSK1Q8TDC3 778 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 A0A1B0GVM2 712 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 TCAF2A6NFQ2 919 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 NT5EP21589 574 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 AGTR1P30556 359 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 GNG2P59768 71 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 MERTKQ12866 999 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 CEP97Q8IW35 865 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 ZNF366Q8N895 744 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 OR4C15Q8NGM1 316 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 ALOX15BO15296 676 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 CLCN4P51793 760 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 SPATS1Q496A3 300 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 CRB2Q5IJ48 1285 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 C3orf33Q6P1S2 294 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 LRRN1Q6UXK5 716 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 CMAHPQ9Y471 501 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 WASF2Q9Y6W5 498 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 DUXAA6NLW8 204 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 CMPK1P30085 196 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 CACNG1Q06432 222 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 DCLRE1AQ6PJP8 1040 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 BBS12Q6ZW61 710 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 SLC22A15Q8IZD6 547 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 GBA3Q9H227 469 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 ZNF358Q9NW07 568 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 ANKRD26Q9UPS8 1709 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 HYKKA2RU49 373 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 TULP2O00295 520 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 AGR2O95994 175 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 IL1R1P14778 569 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 SLC7A1P30825 629 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 SMSP52788 366 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 TLE3Q04726 772 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 ABRAXAS2Q15018 415 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 SLC26A9Q7LBE3 791 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 TCTEX1D2Q8WW35 142 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 CDH10Q9Y6N8 788 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 MBD5Q9P267 1494 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 GLYATL1P3A0A0U1RQE8 302 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 AURKAO14965 403 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 TBL1XO60907 577 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 PSMA6P60900 246 aaKnown RBP9.14□□□□□ -0.95
VPS13A-203ENST00000360280 MED27Q6P2C8 311 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 SPATA6LQ8N4H0 392 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 COQ8AQ8NI60 647 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 APOLD1Q96LR9 279 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 WACQ9BTA9 647 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 EBF3Q9H4W6 596 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 SLC17A7Q9P2U7 560 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 PRDM4Q9UKN5 801 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 PCDHB9Q9Y5E1 797 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 BAIAP2L2Q6UXY1 529 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 LGMNQ99538 433 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 DLG5Q8TDM6 1919 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 AKAP12Q02952 1782 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 VARSP26640 1264 aaKnown RBP9.14□□□□□ -0.95
VPS13A-203ENST00000360280 RORAP35398 523 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 PNPLA2Q96AD5 504 aa9.14□□□□□ -0.95
VPS13A-203ENST00000360280 SPIN1Q9Y657 262 aaPredicted RBP9.14□□□□□ -0.95
VPS13A-203ENST00000360280 NUDT7P0C024 238 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 ANXA8P13928 327 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 ADH6P28332 368 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 DEFB128Q7Z7B8 93 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 LRRN4CLQ8ND94 238 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 ASB9Q96DX5 294 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 SLC35G5Q96KT7 338 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 ULBP1Q9BZM6 244 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 GMFGO60234 142 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 ATP6V1C2Q8NEY4 427 aa9.13□□□□□ -0.95
VPS13A-203ENST00000360280 ZMIZ2Q8NF64 920 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms