RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 USP30Q70CQ3 517 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 CRYBG2Q8N1P7 616 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 ELOA3Q8NG57 546 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 SETD6Q8TBK2 473 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 MOV10Q9HCE1 1003 aaKnown RBP9.52□□□□□ -0.89
CUX1-203ENST00000360264 TEX13CA0A0J9YWL9 993 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 TMEM150BA6NC51 233 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 SCAMP3O14828 347 aaKnown RBP9.52□□□□□ -0.89
CUX1-203ENST00000360264 VLDLRP98155 873 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 C4orf46Q504U0 113 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 TMEM145Q8NBT3 493 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 GDAP2Q9NXN4 497 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 KCNIP3Q9Y2W7 256 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 CLDN25C9JDP6 229 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 CFIP05156 583 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 ZNF41P51814 821 aaPredicted RBP9.52□□□□□ -0.89
CUX1-203ENST00000360264 GPR33Q49SQ1 333 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 EOGTQ5NDL2 527 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 SLC8B1Q6J4K2 584 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 COQ8BQ96D53 544 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 SLC35A5Q9BS91 424 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 AASSQ9UDR5 926 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 PCDHA2Q9Y5H9 948 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 NBASA2RRP1 2371 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 NPHS1O60500 1241 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 ARFRP1Q13795 201 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 ELOAQ14241 798 aaKnown RBP9.52□□□□□ -0.89
CUX1-203ENST00000360264 C10orf62Q5T681 223 aaPredicted RBP9.52□□□□□ -0.89
CUX1-203ENST00000360264 DPEP2Q9H4A9 486 aa9.52□□□□□ -0.89
CUX1-203ENST00000360264 KIDINS220Q9ULH0 1771 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 ANGPTL1O95841 491 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 CRHR2Q13324 411 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 NUDT13Q86X67 352 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 FAM47BQ8NA70 645 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 ETAA1Q9NY74 926 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 SERTAD3Q9UJW9 196 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 PADI2Q9Y2J8 665 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 OR1F1O43749 312 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 DECR1Q16698 335 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 ARMC10Q8N2F6 343 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 HNRNPABQ99729 332 aaKnown RBP9.51□□□□□ -0.89
CUX1-203ENST00000360264 SDK2Q58EX2 2172 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 ASTN1O14525 1302 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 LOXHD1Q8IVV2 1947 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 SCDO00767 359 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 PI15O43692 258 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 DNAJB1P25685 340 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 CBLBQ13191 982 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 SLC9B2Q86UD5 537 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 KIAA1143Q96AT1 154 aaPredicted RBP9.51□□□□□ -0.89
CUX1-203ENST00000360264 DPYSL5Q9BPU6 564 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 FETUBQ9UGM5 382 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 PCDHGB6Q9Y5F9 930 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 SLC33A1O00400 549 aaPredicted RBP9.51□□□□□ -0.89
CUX1-203ENST00000360264 SEMA5AQ13591 1074 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 SPATS1Q496A3 300 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 IL23RQ5VWK5 629 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 GPAT4Q86UL3 456 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 FAM129CQ86XR2 697 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 GPR65Q8IYL9 337 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 FUKQ8N0W3 1084 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 OR10H4Q8NGA5 316 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 OR56A1Q8NGH5 318 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 TDP1Q9NUW8 608 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 NR2E1Q9Y466 385 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 DOCK9Q9BZ29 2069 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 MATN3O15232 486 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 SYNGR4O95473 234 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 ENDOUP21128 410 aaKnown RBP9.51□□□□□ -0.89
CUX1-203ENST00000360264 CDKL1Q00532 357 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 PPP2R2DQ66LE6 453 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 LYARQ9NX58 379 aaKnown RBP9.51□□□□□ -0.89
CUX1-203ENST00000360264 MRPL42Q9Y6G3 142 aaKnown RBP9.51□□□□□ -0.89
CUX1-203ENST00000360264 FABP12A6NFH5 140 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 CXCR1P25024 350 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 FASTKD3Q14CZ7 662 aaKnown RBP9.51□□□□□ -0.89
CUX1-203ENST00000360264 FSTL4Q6MZW2 842 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 CEP97Q8IW35 865 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 KLHL36Q8N4N3 616 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 ZNF599Q96NL3 588 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 C12orf4Q9NQ89 552 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 MEGF6O75095 1541 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 CACNA1HO95180 2353 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 PLSCR1O15162 318 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 ANXA8P13928 327 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 IL7RP16871 459 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 DDR1Q08345 913 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 ARHGAP12Q8IWW6 846 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 GIPC3Q8TF64 312 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 USP29Q9HBJ7 922 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 PNO1Q9NRX1 252 aaKnown RBP9.51□□□□□ -0.89
CUX1-203ENST00000360264 BCL9O00512 1426 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 AIREO43918 545 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 LGR5O75473 907 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 PRPS1L1P21108 318 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 F8A1P23610 371 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 LSM3P62310 102 aaKnown RBP9.51□□□□□ -0.89
CUX1-203ENST00000360264 BRAT1Q6PJG6 821 aa9.51□□□□□ -0.89
CUX1-203ENST00000360264 C9orf43Q8TAL5 461 aaPredicted RBP9.51□□□□□ -0.89
CUX1-203ENST00000360264 TMA7Q9Y2S6 64 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms