RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 TSPAN8P19075 237 aa13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 SPINT3P49223 89 aa13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 MRPS21P82921 87 aaKnown RBP13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 MYBPC1Q00872 1141 aa13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 TGFBIQ15582 683 aa13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 FBXO43Q4G163 708 aa13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 C16orf89Q6UX73 402 aa13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 TMEM92Q6UXU6 159 aa13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 ZNF687Q8N1G0 1237 aa13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 MYO1HQ8N1T3 1032 aa13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 PRPF18Q99633 342 aaKnown RBP13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 NPAS2Q99743 824 aa13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 PKP2Q99959 881 aa13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 LMAN1LQ9HAT1 526 aa13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 LTB4R2Q9NPC1 389 aa13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 RAD18Q9NS91 495 aa13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 PCTPQ9UKL6 214 aa13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 ITM2BQ9Y287 266 aa13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 TNPO3Q9Y5L0 923 aaKnown RBP13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 DNAJC15Q9Y5T4 150 aa13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 PRSS21Q9Y6M0 314 aa13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 FAM170BA6NMN3 283 aa13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 C16orf96A6NNT2 1141 aa13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 STK25O00506 426 aa13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 NPC1O15118 1278 aa13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 C1SP09871 688 aa13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 NELFEP18615 380 aaKnown RBP13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 CLCN2P51788 898 aa13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 HK3P52790 923 aa13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 ARHGEF7Q14155 803 aa13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 STARD3Q14849 445 aa13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 MAPRE2Q15555 327 aa13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 GPRC6AQ5T6X5 926 aa13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 ZBTB2Q8N680 514 aa13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 KYQ8NBH2 561 aa13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 OR56A4Q8NGH8 313 aa13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 NSUN5Q96P11 429 aaKnown RBP13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 NUSAP1Q9BXS6 441 aaKnown RBP13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 DKK3Q9UBP4 350 aa13.57□□□□□ -0.24
CSNK1E-201ENST00000359867 IGLV3-16A0A075B6K0 115 aa13.56□□□□□ -0.24
CSNK1E-201ENST00000359867 KANSL1LA0AUZ9 987 aa13.56□□□□□ -0.24
CSNK1E-201ENST00000359867 MID1O15344 667 aa13.56□□□□□ -0.24
CSNK1E-201ENST00000359867 VPS4BO75351 444 aa13.56□□□□□ -0.24
CSNK1E-201ENST00000359867 CBSLP0DN79 551 aa13.56□□□□□ -0.24
CSNK1E-201ENST00000359867 PIM1P11309 404 aaPredicted RBP13.56□□□□□ -0.24
CSNK1E-201ENST00000359867 VIPR1P32241 457 aa13.56□□□□□ -0.24
CSNK1E-201ENST00000359867 CBSP35520 551 aa13.56□□□□□ -0.24
CSNK1E-201ENST00000359867 STARD6P59095 220 aa13.56□□□□□ -0.24
CSNK1E-201ENST00000359867 GAS6Q14393 721 aa13.56□□□□□ -0.24
CSNK1E-201ENST00000359867 ZNF423Q2M1K9 1284 aa13.56□□□□□ -0.24
CSNK1E-201ENST00000359867 TTLL9Q3SXZ7 439 aa13.56□□□□□ -0.24
CSNK1E-201ENST00000359867 CYHR1Q6ZMK1 362 aa13.56□□□□□ -0.24
CSNK1E-201ENST00000359867 FRA10AC1Q70Z53 315 aa13.56□□□□□ -0.24
CSNK1E-201ENST00000359867 PPP1R14BQ96C90 147 aa13.56□□□□□ -0.24
CSNK1E-201ENST00000359867 BTBD9Q96Q07 612 aa13.56□□□□□ -0.24
CSNK1E-201ENST00000359867 COPS8Q99627 209 aa13.56□□□□□ -0.24
CSNK1E-201ENST00000359867 RSPH9Q9H1X1 276 aaPredicted RBP13.56□□□□□ -0.24
CSNK1E-201ENST00000359867 TBC1D17Q9HA65 648 aa13.56□□□□□ -0.24
CSNK1E-201ENST00000359867 PRPF19Q9UMS4 504 aaKnown RBP13.56□□□□□ -0.24
CSNK1E-201ENST00000359867 RAD51BO15315 384 aa13.56□□□□□ -0.24
CSNK1E-201ENST00000359867 PEX1O43933 1283 aa13.56□□□□□ -0.24
CSNK1E-201ENST00000359867 TRIM16O95361 564 aa13.56□□□□□ -0.24
CSNK1E-201ENST00000359867 S100BP04271 92 aaPredicted RBP13.56□□□□□ -0.24
CSNK1E-201ENST00000359867 IDO1P14902 403 aa13.56□□□□□ -0.24
CSNK1E-201ENST00000359867 TIMP2P16035 220 aa13.56□□□□□ -0.24
CSNK1E-201ENST00000359867 HOXD11P31277 338 aaPredicted RBP13.56□□□□□ -0.24
CSNK1E-201ENST00000359867 FZD5Q13467 585 aa13.56□□□□□ -0.24
CSNK1E-201ENST00000359867 PCBP2Q15366 365 aaKnown RBP eCLIP13.56□□□□□ -0.241e-6■■■■■ 27.4
CSNK1E-201ENST00000359867 CST6Q15828 149 aa13.56□□□□□ -0.24
CSNK1E-201ENST00000359867 TRMT11Q7Z4G4 463 aaKnown RBP13.56□□□□□ -0.24
CSNK1E-201ENST00000359867 UBALD2Q8IYN6 164 aa13.56□□□□□ -0.24
CSNK1E-201ENST00000359867 CLDN19Q8N6F1 224 aa13.56□□□□□ -0.24
CSNK1E-201ENST00000359867 SNX31Q8N9S9 440 aa13.56□□□□□ -0.24
CSNK1E-201ENST00000359867 TMIEQ8NEW7 156 aa13.56□□□□□ -0.24
CSNK1E-201ENST00000359867 TWIST2Q8WVJ9 160 aa13.56□□□□□ -0.24
CSNK1E-201ENST00000359867 FAM126AQ9BYI3 521 aaPredicted RBP13.56□□□□□ -0.24
CSNK1E-201ENST00000359867 SEMA6AQ9H2E6 1030 aa13.56□□□□□ -0.24
CSNK1E-201ENST00000359867 EFCAB1Q9HAE3 211 aa13.56□□□□□ -0.24
CSNK1E-201ENST00000359867 SERGEFQ9UGK8 458 aa13.56□□□□□ -0.24
CSNK1E-201ENST00000359867 SMIM31A0A1B0GVY4 71 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 EIF3FO00303 357 aaPredicted RBP13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 PPP6CO00743 305 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 ESRRBO95718 433 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 DCDC1P59894 354 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 NUMA1Q14980 2115 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 ATP13A5Q4VNC0 1218 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 SBSNQ6UWP8 590 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 DSG4Q86SJ6 1040 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 MARVELD2Q8N4S9 558 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 PDPRQ8NCN5 879 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 LKAAEAR1Q8TD35 194 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 GAB3Q8WWW8 586 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 CCT7Q99832 543 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 HGH1Q9BTY7 390 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 WDR41Q9HAD4 459 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 PCDH12Q9NPG4 1184 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 SEMA4BQ9NPR2 832 aaPredicted RBP13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 SMOXQ9NWM0 555 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 KCTD5Q9NXV2 234 aa13.55□□□□□ -0.24
CSNK1E-201ENST00000359867 C6orf203Q9P0P8 240 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms