RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 PARVBQ9HBI1 364 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 SSU72Q9NP77 194 aaKnown RBP12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 IMP3Q9NV31 184 aaKnown RBP12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 TMEM216Q9P0N5 145 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 COLEC10Q9Y6Z7 277 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 TPRP12270 2363 aaKnown RBP12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 NPEPPSL1A6NEC2 478 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 ARHGEF33A8MVX0 844 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 COPEO14579 308 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 TYROBPO43914 113 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 GLRA3O75311 464 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 CATP04040 527 aaKnown RBP12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 RPN2P04844 631 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 RBP1P09455 135 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 CD59P13987 128 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 NDUFS1P28331 727 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 FASLGP48023 281 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 OR4D1Q15615 310 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 PPP1R3AQ16821 1122 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 AASDHQ4L235 1098 aaPredicted RBP12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 C14orf28Q4W4Y0 310 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 TTMPQ5BVD1 217 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 DUS1LQ6P1R4 473 aaKnown RBP12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 KLC3Q6P597 504 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 UBE2R2Q712K3 238 aaPredicted RBP12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 ADAMTSL2Q86TH1 951 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 SLC9B2Q86UD5 537 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 SLC35F3Q8IY50 421 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 EID2Q8N6I1 236 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 GOLGA6L1Q8N7Z2 621 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 ARL10Q8N8L6 244 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 AVL9Q8NBF6 648 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 OR5AR1Q8NGP9 310 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 STAG3L4Q8TBR4 150 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 MAGEC3Q8TD91 643 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 MCOLN3Q8TDD5 553 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 CXorf40BQ96DE9 158 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 APOPT1Q96IL0 206 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 ATP6V1G3Q96LB4 118 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 TSNARE1Q96NA8 513 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 CNTNAP3BQ96NU0 1288 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 CNTNAP3Q9BZ76 1288 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 TRIT1Q9H3H1 467 aaKnown RBP12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 RDH14Q9HBH5 336 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 SLC40A1Q9NP59 571 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 POT1Q9NUX5 634 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 SIRPGQ9P1W8 387 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 POLG2Q9UHN1 485 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 GRID1Q9ULK0 1009 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 PDE10AQ9Y233 779 aa12.08□□□□□ -0.48
NIF3L1-201ENST00000359683 CACNA1BQ00975 2339 aa12.07□□□□□ -0.48
NIF3L1-201ENST00000359683 GOLGA4Q13439 2230 aaKnown RBP12.07□□□□□ -0.48
NIF3L1-201ENST00000359683 ASCC3Q8N3C0 2202 aaKnown RBP12.07□□□□□ -0.48
NIF3L1-201ENST00000359683 PRAMEF33A0A0G2JMD5 474 aa12.07□□□□□ -0.48
NIF3L1-201ENST00000359683 HMGB1P1B2RPK0 211 aaPredicted RBP12.07□□□□□ -0.48
NIF3L1-201ENST00000359683 FLRT2O43155 660 aa12.07□□□□□ -0.48
NIF3L1-201ENST00000359683 SIGLEC6O43699 453 aa12.07□□□□□ -0.48
NIF3L1-201ENST00000359683 KERAO60938 352 aa12.07□□□□□ -0.48
NIF3L1-201ENST00000359683 VIPP01282 170 aa12.07□□□□□ -0.48
NIF3L1-201ENST00000359683 ENO2P09104 434 aaPredicted RBP12.07□□□□□ -0.48
NIF3L1-201ENST00000359683 TPBGLP0DKB5 382 aa12.07□□□□□ -0.48
NIF3L1-201ENST00000359683 GRK6P43250 576 aa12.07□□□□□ -0.48
NIF3L1-201ENST00000359683 GLRBP48167 497 aa12.07□□□□□ -0.48
NIF3L1-201ENST00000359683 KPNA2P52292 529 aaKnown RBP12.07□□□□□ -0.48
NIF3L1-201ENST00000359683 MAZP56270 477 aaKnown RBP12.07□□□□□ -0.48
NIF3L1-201ENST00000359683 MAGOHP61326 146 aaKnown RBP12.07□□□□□ -0.48
NIF3L1-201ENST00000359683 GRB7Q14451 532 aa12.07□□□□□ -0.48
NIF3L1-201ENST00000359683 PHKG1Q16816 387 aa12.07□□□□□ -0.48
NIF3L1-201ENST00000359683 TECRLQ5HYJ1 363 aa12.07□□□□□ -0.48
NIF3L1-201ENST00000359683 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.07□□□□□ -0.48
NIF3L1-201ENST00000359683 C16orf46Q6P387 395 aa12.07□□□□□ -0.48
NIF3L1-201ENST00000359683 TTC23LQ6PF05 361 aa12.07□□□□□ -0.48
NIF3L1-201ENST00000359683 DCUN1D3Q8IWE4 304 aa12.07□□□□□ -0.48
NIF3L1-201ENST00000359683 RBM12BQ8IXT5 1001 aaKnown RBP12.07□□□□□ -0.48
NIF3L1-201ENST00000359683 RAD51AP1Q96B01 352 aa12.07□□□□□ -0.48
NIF3L1-201ENST00000359683 APOLD1Q96LR9 279 aa12.07□□□□□ -0.48
NIF3L1-201ENST00000359683 CAMK1GQ96NX5 476 aa12.07□□□□□ -0.48
NIF3L1-201ENST00000359683 ATOH8Q96SQ7 321 aa12.07□□□□□ -0.48
NIF3L1-201ENST00000359683 MRPL57Q9BQC6 102 aaKnown RBP12.07□□□□□ -0.48
NIF3L1-201ENST00000359683 ALG9Q9H6U8 611 aa12.07□□□□□ -0.48
NIF3L1-201ENST00000359683 KIR3DX1Q9H7L2 352 aa12.07□□□□□ -0.48
NIF3L1-201ENST00000359683 WDR70Q9NW82 654 aa12.07□□□□□ -0.48
NIF3L1-201ENST00000359683 EMCNQ9ULC0 261 aa12.07□□□□□ -0.48
NIF3L1-201ENST00000359683 BTBD3Q9Y2F9 522 aa12.07□□□□□ -0.48
NIF3L1-201ENST00000359683 PLLPQ9Y342 182 aa12.07□□□□□ -0.48
NIF3L1-201ENST00000359683 OARD1Q9Y530 152 aa12.07□□□□□ -0.48
NIF3L1-201ENST00000359683 LY6G6EA0A0G2JKS1 128 aa12.06□□□□□ -0.48
NIF3L1-201ENST00000359683 C4orf47A7E2U8 309 aa12.06□□□□□ -0.48
NIF3L1-201ENST00000359683 TARM1B6A8C7 271 aa12.06□□□□□ -0.48
NIF3L1-201ENST00000359683 MYO1CO00159 1063 aa12.06□□□□□ -0.48
NIF3L1-201ENST00000359683 PPM1DO15297 605 aa12.06□□□□□ -0.48
NIF3L1-201ENST00000359683 PRPF4O43172 522 aaKnown RBP eCLIP12.06□□□□□ -0.48
NIF3L1-201ENST00000359683 SPAG7O75391 227 aa12.06□□□□□ -0.48
NIF3L1-201ENST00000359683 ADRB1P08588 477 aa12.06□□□□□ -0.48
NIF3L1-201ENST00000359683 SBK3P0C264 359 aa12.06□□□□□ -0.48
NIF3L1-201ENST00000359683 CYP2A7P20853 494 aa12.06□□□□□ -0.48
NIF3L1-201ENST00000359683 MAP4P27816 1152 aaKnown RBP12.06□□□□□ -0.48
NIF3L1-201ENST00000359683 BDKRB1P46663 353 aa12.06□□□□□ -0.48
NIF3L1-201ENST00000359683 RPIAP49247 311 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms