RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 CPEB1Q9BZB8 566 aaKnown RBP15.49■□□□□ 0.07
PHTF1-201ENST00000357783 RBM38Q9H0Z9 239 aaKnown RBP15.49■□□□□ 0.07
PHTF1-201ENST00000357783 CLIC3O95833 236 aa15.48■□□□□ 0.07
PHTF1-201ENST00000357783 AOAHP28039 575 aa15.48■□□□□ 0.07
PHTF1-201ENST00000357783 CDH15P55291 814 aa15.48■□□□□ 0.07
PHTF1-201ENST00000357783 SERPINA13PQ6UXR4 307 aa15.48■□□□□ 0.07
PHTF1-201ENST00000357783 GTF2H4Q92759 462 aa15.48■□□□□ 0.07
PHTF1-201ENST00000357783 USP7Q93009 1102 aa15.48■□□□□ 0.07
PHTF1-201ENST00000357783 PYCR2Q96C36 320 aa15.48■□□□□ 0.07
PHTF1-201ENST00000357783 ACPTQ9BZG2 426 aa15.48■□□□□ 0.07
PHTF1-201ENST00000357783 SLC32A1Q9H598 525 aa15.48■□□□□ 0.07
PHTF1-201ENST00000357783 VCX3AQ9NNX9 186 aa15.48■□□□□ 0.07
PHTF1-201ENST00000357783 TRIM43BA6NCK2 446 aa15.48■□□□□ 0.07
PHTF1-201ENST00000357783 PDYNP01213 254 aa15.48■□□□□ 0.07
PHTF1-201ENST00000357783 ZNF23P17027 643 aa15.48■□□□□ 0.07
PHTF1-201ENST00000357783 TEAD2Q15562 447 aa15.48■□□□□ 0.07
PHTF1-201ENST00000357783 ZXDCQ2QGD7 858 aaPredicted RBP15.48■□□□□ 0.07
PHTF1-201ENST00000357783 C1orf53Q5VUE5 145 aa15.48■□□□□ 0.07
PHTF1-201ENST00000357783 METTL2BQ6P1Q9 378 aaKnown RBP15.48■□□□□ 0.07
PHTF1-201ENST00000357783 OR8J3Q8NGG0 315 aa15.48■□□□□ 0.07
PHTF1-201ENST00000357783 OSCP1Q8WVF1 389 aa15.48■□□□□ 0.07
PHTF1-201ENST00000357783 TRIM43Q96BQ3 446 aaPredicted RBP15.48■□□□□ 0.07
PHTF1-201ENST00000357783 FBXL20Q96IG2 436 aa15.48■□□□□ 0.07
PHTF1-201ENST00000357783 ZNF641Q96N77 438 aaPredicted RBP15.48■□□□□ 0.07
PHTF1-201ENST00000357783 THUMPD3Q9BV44 507 aaKnown RBP15.48■□□□□ 0.07
PHTF1-201ENST00000357783 SLC29A3Q9BZD2 475 aa15.48■□□□□ 0.07
PHTF1-201ENST00000357783 IKZF5Q9H5V7 419 aa15.48■□□□□ 0.07
PHTF1-201ENST00000357783 C1orf109Q9NX04 203 aa15.48■□□□□ 0.07
PHTF1-201ENST00000357783 FAM8A1Q9UBU6 413 aa15.48■□□□□ 0.07
PHTF1-201ENST00000357783 IGLV3-16A0A075B6K0 115 aa15.47■□□□□ 0.07
PHTF1-201ENST00000357783 SEC24DO94855 1032 aaPredicted RBP15.47■□□□□ 0.07
PHTF1-201ENST00000357783 KRT6AP02538 564 aa15.47■□□□□ 0.07
PHTF1-201ENST00000357783 KRT6BP04259 564 aa15.47■□□□□ 0.07
PHTF1-201ENST00000357783 PGRP06401 933 aa15.47■□□□□ 0.07
PHTF1-201ENST00000357783 BCKDHAP12694 445 aa15.47■□□□□ 0.07
PHTF1-201ENST00000357783 KRT6CP48668 564 aa15.47■□□□□ 0.07
PHTF1-201ENST00000357783 NEK2P51955 445 aa15.47■□□□□ 0.07
PHTF1-201ENST00000357783 LSAMPQ13449 338 aa15.47■□□□□ 0.07
PHTF1-201ENST00000357783 GDPD4Q6W3E5 623 aa15.47■□□□□ 0.07
PHTF1-201ENST00000357783 GPR65Q8IYL9 337 aa15.47■□□□□ 0.07
PHTF1-201ENST00000357783 ZNF786Q8N393 782 aa15.47■□□□□ 0.07
PHTF1-201ENST00000357783 OR10A6Q8NH74 314 aa15.47■□□□□ 0.07
PHTF1-201ENST00000357783 ITFG1Q8TB96 612 aa15.47■□□□□ 0.07
PHTF1-201ENST00000357783 MAGEE2Q8TD90 523 aaPredicted RBP15.47■□□□□ 0.07
PHTF1-201ENST00000357783 FIG4Q92562 907 aa15.47■□□□□ 0.07
PHTF1-201ENST00000357783 SCAMP4Q969E2 229 aa15.47■□□□□ 0.07
PHTF1-201ENST00000357783 ZNF583Q96ND8 569 aa15.47■□□□□ 0.07
PHTF1-201ENST00000357783 CEP44Q9C0F1 390 aa15.47■□□□□ 0.07
PHTF1-201ENST00000357783 LINC00597Q9H2U6 94 aa15.47■□□□□ 0.07
PHTF1-201ENST00000357783 PARVBQ9HBI1 364 aa15.47■□□□□ 0.07
PHTF1-201ENST00000357783 DMTF1Q9Y222 760 aa15.47■□□□□ 0.07
PHTF1-201ENST00000357783 CARNS1A5YM72 827 aa15.47■□□□□ 0.07
PHTF1-201ENST00000357783 ZBBXA8MT70 800 aa15.47■□□□□ 0.07
PHTF1-201ENST00000357783 RFPL2O75678 378 aa15.47■□□□□ 0.07
PHTF1-201ENST00000357783 ANXA6P08133 673 aa15.47■□□□□ 0.07
PHTF1-201ENST00000357783 CDH1P12830 882 aa15.47■□□□□ 0.07
PHTF1-201ENST00000357783 GGT1P19440 569 aa15.47■□□□□ 0.07
PHTF1-201ENST00000357783 LRRC26Q2I0M4 334 aa15.47■□□□□ 0.07
PHTF1-201ENST00000357783 OR2T12Q8NG77 320 aa15.47■□□□□ 0.07
PHTF1-201ENST00000357783 SELENOMQ8WWX9 145 aa15.47■□□□□ 0.07
PHTF1-201ENST00000357783 EMILIN2Q9BXX0 1053 aa15.47■□□□□ 0.07
PHTF1-201ENST00000357783 CRISPLD2Q9H0B8 497 aa15.47■□□□□ 0.07
PHTF1-201ENST00000357783 CLK4Q9HAZ1 481 aaKnown RBP15.47■□□□□ 0.07
PHTF1-201ENST00000357783 GSTA4O15217 222 aa15.46■□□□□ 0.07
PHTF1-201ENST00000357783 TIMP1P01033 207 aa15.46■□□□□ 0.07
PHTF1-201ENST00000357783 PCNAP12004 261 aa15.46■□□□□ 0.07
PHTF1-201ENST00000357783 TYRP14679 529 aa15.46■□□□□ 0.07
PHTF1-201ENST00000357783 MYF6P23409 242 aa15.46■□□□□ 0.07
PHTF1-201ENST00000357783 CYP4F3Q08477 520 aa15.46■□□□□ 0.07
PHTF1-201ENST00000357783 ADRM1Q16186 407 aa15.46■□□□□ 0.07
PHTF1-201ENST00000357783 SLC36A3Q495N2 470 aa15.46■□□□□ 0.07
PHTF1-201ENST00000357783 GTDC1Q4AE62 458 aa15.46■□□□□ 0.07
PHTF1-201ENST00000357783 USP39Q53GS9 565 aaKnown RBP15.46■□□□□ 0.07
PHTF1-201ENST00000357783 TTC33Q6PID6 262 aaPredicted RBP15.46■□□□□ 0.07
PHTF1-201ENST00000357783 RNF165Q6ZSG1 346 aa15.46■□□□□ 0.07
PHTF1-201ENST00000357783 OFCC1Q8IZS5 231 aa15.46■□□□□ 0.07
PHTF1-201ENST00000357783 OR2A12Q8NGT7 310 aa15.46■□□□□ 0.07
PHTF1-201ENST00000357783 SORCS1Q8WY21 1168 aa15.46■□□□□ 0.07
PHTF1-201ENST00000357783 MPP4Q96JB8 637 aa15.46■□□□□ 0.07
PHTF1-201ENST00000357783 OR52E6Q96RD3 313 aa15.46■□□□□ 0.07
PHTF1-201ENST00000357783 TCF25Q9BQ70 676 aa15.46■□□□□ 0.07
PHTF1-201ENST00000357783 TBCDQ9BTW9 1192 aa15.46■□□□□ 0.07
PHTF1-201ENST00000357783 SLC12A9Q9BXP2 914 aa15.46■□□□□ 0.07
PHTF1-201ENST00000357783 CLMPQ9H6B4 373 aa15.46■□□□□ 0.07
PHTF1-201ENST00000357783 SOX17Q9H6I2 414 aaPredicted RBP15.46■□□□□ 0.07
PHTF1-201ENST00000357783 SAGE1Q9NXZ1 904 aa15.46■□□□□ 0.07
PHTF1-201ENST00000357783 SLC25A37Q9NYZ2 338 aa15.46■□□□□ 0.07
PHTF1-201ENST00000357783 KLHL42Q9P2K6 505 aa15.46■□□□□ 0.07
PHTF1-201ENST00000357783 DLGAP4Q9Y2H0 992 aa15.46■□□□□ 0.07
PHTF1-201ENST00000357783 PABPN1LA6NDY0 278 aaKnown RBP15.46■□□□□ 0.07
PHTF1-201ENST00000357783 HIDE1A8MVS5 230 aa15.46■□□□□ 0.07
PHTF1-201ENST00000357783 GMNNO75496 209 aa15.46■□□□□ 0.07
PHTF1-201ENST00000357783 IL6P05231 212 aa15.46■□□□□ 0.07
PHTF1-201ENST00000357783 HIST1H2AGP0C0S8 130 aaPredicted RBP15.46■□□□□ 0.07
PHTF1-201ENST00000357783 ATP1B2P14415 290 aaPredicted RBP15.46■□□□□ 0.07
PHTF1-201ENST00000357783 HIST1H2ADP20671 130 aa15.46■□□□□ 0.07
PHTF1-201ENST00000357783 ITPKAP23677 461 aa15.46■□□□□ 0.07
PHTF1-201ENST00000357783 RECQLP46063 649 aaPredicted RBP15.46■□□□□ 0.07
PHTF1-201ENST00000357783 RPS9P46781 194 aaKnown RBP15.46■□□□□ 0.07
PHTF1-201ENST00000357783 SMU1Q2TAY7 513 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms