RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 A0A1W2PPM1 405 aa11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 A0A1W2PQH9 124 aa11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 H3BSH0 61 aa11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 ENPP3O14638 875 aa11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 PAGE1O75459 146 aa11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 FGF1P05230 155 aa11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 ACSL1P33121 698 aa11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 GRIA1P42261 906 aa11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 ANKRD46Q86W74 232 aa11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 CENPSQ8N2Z9 138 aa11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 TRIM43Q96BQ3 446 aaPredicted RBP11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 KANTRA0A1W2PQU2 76 aa11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 PER2O15055 1255 aa11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 CD52P31358 61 aa11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 PTPN9P43378 593 aa11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 TMEM53Q6P2H8 277 aa11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 AKAP1Q92667 903 aaKnown RBP eCLIP11.32□□□□□ -0.67e-7■□□□□ 10.2
SPTBN1-202ENST00000356805 RHBDF1Q96CC6 855 aa11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 ZNF317Q96PQ6 595 aaPredicted RBP11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 COQ10BQ9H8M1 238 aa11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 NMUR1Q9HB89 426 aa11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 ZNF69Q9UC07 566 aa11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 OR2AG2A6NM03 316 aa11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 RLN2P04090 185 aa11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 DPY19L1Q2PZI1 675 aa11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 NSMCE3Q96MG7 304 aa11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 ACP6Q9NPH0 428 aa11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 FAM53CQ9NYF3 392 aa11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 GLS2Q9UI32 602 aa11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 VWA7Q9Y334 891 aa11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 IFT52Q9Y366 437 aa11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 PDCD5O14737 125 aa11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 GSTT2P0CG29 244 aa11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 DNAJB1P25685 340 aa11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 MAT2AP31153 395 aaKnown RBP11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 KIR3DL1P43629 444 aa11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 GNPDA1P46926 289 aa11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 RASGRP3Q8IV61 690 aa11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 OR5K1Q8NHB7 308 aa11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 DMRTB1Q96MA1 342 aa11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 RANBP3Q9H6Z4 567 aaPredicted RBP11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 RC3H2Q9HBD1 1191 aaKnown RBP11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 RDH8Q9NYR8 311 aa11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 MAU2Q9Y6X3 613 aa11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 E9PCH4 1651 aa11.32□□□□□ -0.6
SPTBN1-202ENST00000356805 KERAO60938 352 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 UBXN7O94888 489 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 GLUD1P00367 558 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 RORAP35398 523 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 GARNL3Q5VVW2 1013 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 ZNF782Q6ZMW2 699 aaPredicted RBP11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 UFD1Q92890 307 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 RTFDC1Q9BY42 306 aaPredicted RBP11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 PORCNQ9H237 461 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 AGO3Q9H9G7 860 aaKnown RBP11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 RPL36Q9Y3U8 105 aaKnown RBP11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 MSI1O43347 362 aaKnown RBP11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 CPNE3O75131 537 aaKnown RBP11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 SLC2A2P11168 524 aaPredicted RBP11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 AOC1P19801 751 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 HOXC8P31273 242 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 HTR7P34969 479 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 ARCN1P48444 511 aaKnown RBP11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 FBXO48Q5FWF7 155 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 IQCHQ86VS3 1027 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 ZBTB2Q8N680 514 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 COX18Q8N8Q8 333 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 ZSWIM3Q96MP5 696 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 ZFP3Q96NJ6 502 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 SNTG1Q9NSN8 517 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 NME6O75414 186 aaPredicted RBP11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 CLDN9O95484 217 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 C2P06681 752 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 IL7RP16871 459 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 FUT4P22083 530 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 STOMP27105 288 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 ZNF227Q86WZ6 799 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 SAP18O00422 153 aaKnown RBP11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 PTPRAP18433 802 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 LHCGRP22888 699 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 GTF2BQ00403 316 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 RPL6Q02878 288 aaKnown RBP11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 SIM2Q14190 667 aaPredicted RBP11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 WSCD2Q2TBF2 565 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 SCGB2B2Q4G0G5 96 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 ALG10Q5BKT4 473 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 SLC39A3Q9BRY0 314 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 DCSTAMPQ9H295 470 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 TMEM134Q9H6X4 195 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 PLEKHA6Q9Y2H5 1048 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 STXBP5LQ9Y2K9 1186 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 NR2E1Q9Y466 385 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 ZNF451Q9Y4E5 1061 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 PITPNM1O00562 1244 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 ACOX3O15254 700 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 COL6A1P12109 1028 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 DCDC1P59894 354 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 FAM189A2Q15884 450 aa11.31□□□□□ -0.6
SPTBN1-202ENST00000356805 SH3D19Q5HYK7 790 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms