RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 FAM120BQ96EK7 910 aaKnown RBP9.93□□□□□ -0.82
PTPRA-203ENST00000356147 SERPINB11Q96P15 392 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 TSSK3Q96PN8 268 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 PPP1R2P1Q96PQ5 205 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 EGFL8Q99944 293 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 ACBD6Q9BR61 282 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 NUSAP1Q9BXS6 441 aaKnown RBP9.93□□□□□ -0.82
PTPRA-203ENST00000356147 TPK1Q9H3S4 243 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 ABHD16BQ9H3Z7 469 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 AGO1Q9UL18 857 aaKnown RBP9.93□□□□□ -0.82
PTPRA-203ENST00000356147 A0A1W2PQ67 120 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 SLC12A8A0AV02 714 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 A8MX80 341 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 EFCAB9A8MZ26 197 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 AREL1O15033 823 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 PER2O15055 1255 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 FGF1P05230 155 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 PGRP06401 933 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 ALOX12P18054 663 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 CDKN2CP42773 168 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 ST13P50502 369 aaKnown RBP9.93□□□□□ -0.82
PTPRA-203ENST00000356147 SEMG2Q02383 582 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 ILF2Q12905 390 aaKnown RBP9.93□□□□□ -0.82
PTPRA-203ENST00000356147 GTF2H2Q13888 395 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 GTF2H2CQ6P1K8 395 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 ARMC8Q8IUR7 673 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 ZDHHC21Q8IVQ6 265 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 OR5K1Q8NHB7 308 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 PROX1Q92786 737 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 ZNF300Q96RE9 604 aaPredicted RBP9.93□□□□□ -0.82
PTPRA-203ENST00000356147 DCSTAMPQ9H295 470 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 PRDM5Q9NQX1 630 aaPredicted RBP9.93□□□□□ -0.82
PTPRA-203ENST00000356147 KCNH4Q9UQ05 1017 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 M0R129 80 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 SLC22A1O15245 554 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 NBNO60934 754 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 HPRP00739 348 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 VIPP01282 170 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 AKT1P31749 480 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 LIPAP38571 399 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 KCNQ1P51787 676 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 GABARAPL2P60520 117 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 ACVR1Q04771 509 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 MADCAM1Q13477 382 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 CCL14Q16627 93 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 TYSND1Q2T9J0 566 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 C10orf120Q5SQS8 335 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 DESI1Q6ICB0 168 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 RGMBQ6NW40 437 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 RNF175Q8N4F7 328 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 CELF2-AS1Q8N7Q2 184 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 CDC26Q8NHZ8 85 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 S100ZQ8WXG8 99 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 YIPF6Q96EC8 236 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 VMP1Q96GC9 406 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 BTN2A3PQ96KV6 586 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 PSD2Q9BQI7 771 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 TP63Q9H3D4 680 aaPredicted RBP9.93□□□□□ -0.82
PTPRA-203ENST00000356147 C17orf102A2RUQ5 167 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 SH3BGRLO75368 114 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 PRAMEF12O95522 483 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 HOXD8P13378 290 aaPredicted RBP9.92□□□□□ -0.82
PTPRA-203ENST00000356147 HLA-DPA1P20036 260 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 OGNP20774 298 aaKnown RBP9.92□□□□□ -0.82
PTPRA-203ENST00000356147 AQP1P29972 269 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 CA5AP35218 305 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 SERPINB10P48595 397 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 CASP9P55211 416 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 COPZ1P61923 177 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 SLC35A2P78381 396 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 IFITM2Q01629 132 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 SERINC3Q13530 473 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 KIAA0040Q15053 153 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 CPSF6Q16630 551 aaKnown RBP eCLIP9.92□□□□□ -0.82
PTPRA-203ENST00000356147 GPR153Q6NV75 609 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 LINGO4Q6UY18 593 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 ZNF551Q7Z340 670 aaPredicted RBP9.92□□□□□ -0.82
PTPRA-203ENST00000356147 GALNT7Q86SF2 657 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 AKAP14Q86UN6 197 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 RASAL3Q86YV0 1011 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 LYSMD2Q8IV50 215 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 CCDC103Q8IW40 242 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 ZNF683Q8IZ20 524 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 ATG16L2Q8NAA4 619 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 PIK3C3Q8NEB9 887 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 EGLN2Q96KS0 407 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 ZNF382Q96SR6 550 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 ZBTB18Q99592 522 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 DPH2Q9BQC3 489 aaPredicted RBP9.92□□□□□ -0.82
PTPRA-203ENST00000356147 ROGDIQ9GZN7 287 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 GORASP2Q9H8Y8 452 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 ACOT13Q9NPJ3 140 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 HEBP1Q9NRV9 189 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 TMEM248Q9NWD8 314 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 ELOVL2Q9NXB9 296 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 QPCTLQ9NXS2 382 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 PDP1Q9P0J1 537 aaPredicted RBP9.92□□□□□ -0.82
PTPRA-203ENST00000356147 ERVK-11Q9UQG0 969 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 TMA7Q9Y2S6 64 aaKnown RBP9.92□□□□□ -0.82
PTPRA-203ENST00000356147 BOLA1Q9Y3E2 137 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms