RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 PDE9AO76083 593 aa15.44■□□□□ 0.06
RTN3-205ENST00000356000 RPS17P08708 135 aaKnown RBP15.44■□□□□ 0.06
RTN3-205ENST00000356000 ARP10275 920 aa15.44■□□□□ 0.06
RTN3-205ENST00000356000 ZNF143P52747 638 aaPredicted RBP15.44■□□□□ 0.06
RTN3-205ENST00000356000 ZNF280AP59817 542 aaPredicted RBP15.44■□□□□ 0.06
RTN3-205ENST00000356000 USP10Q14694 798 aaKnown RBP15.44■□□□□ 0.06
RTN3-205ENST00000356000 LTB4RQ15722 352 aa15.44■□□□□ 0.06
RTN3-205ENST00000356000 SMN1Q16637 294 aaKnown RBP15.44■□□□□ 0.06
RTN3-205ENST00000356000 LRFN4Q6PJG9 635 aa15.44■□□□□ 0.06
RTN3-205ENST00000356000 BLOC1S3Q6QNY0 202 aa15.44■□□□□ 0.06
RTN3-205ENST00000356000 CYP4Z2PQ8N1L4 340 aa15.44■□□□□ 0.06
RTN3-205ENST00000356000 COLGALT1Q8NBJ5 622 aa15.44■□□□□ 0.06
RTN3-205ENST00000356000 OR5K1Q8NHB7 308 aa15.44■□□□□ 0.06
RTN3-205ENST00000356000 YIPF5Q969M3 257 aa15.44■□□□□ 0.06
RTN3-205ENST00000356000 SPATA13Q96N96 652 aa15.44■□□□□ 0.06
RTN3-205ENST00000356000 TMEM74Q96NL1 305 aa15.44■□□□□ 0.06
RTN3-205ENST00000356000 CYP2S1Q96SQ9 504 aa15.44■□□□□ 0.06
RTN3-205ENST00000356000 OR51E2Q9H255 320 aa15.44■□□□□ 0.06
RTN3-205ENST00000356000 AKTIPQ9H8T0 292 aa15.44■□□□□ 0.06
RTN3-205ENST00000356000 ACSL5Q9ULC5 683 aa15.44■□□□□ 0.06
RTN3-205ENST00000356000 ORC6Q9Y5N6 252 aa15.44■□□□□ 0.06
RTN3-205ENST00000356000 GMPPBQ9Y5P6 360 aa15.44■□□□□ 0.06
RTN3-205ENST00000356000 BTN3A1O00481 513 aa15.43■□□□□ 0.06
RTN3-205ENST00000356000 HNRNPDLO14979 420 aaKnown RBP15.43■□□□□ 0.06
RTN3-205ENST00000356000 SEC14L5O43304 696 aa15.43■□□□□ 0.06
RTN3-205ENST00000356000 PMPCBO75439 489 aa15.43■□□□□ 0.06
RTN3-205ENST00000356000 RAF1P04049 648 aa15.43■□□□□ 0.06
RTN3-205ENST00000356000 CLCNKAP51800 687 aa15.43■□□□□ 0.06
RTN3-205ENST00000356000 TIGD6Q17RP2 521 aa15.43■□□□□ 0.06
RTN3-205ENST00000356000 FAM102BQ5T8I3 360 aa15.43■□□□□ 0.06
RTN3-205ENST00000356000 NT5DC4Q86YG4 428 aa15.43■□□□□ 0.06
RTN3-205ENST00000356000 TSPEARQ8WU66 669 aa15.43■□□□□ 0.06
RTN3-205ENST00000356000 LHX5Q9H2C1 402 aa15.43■□□□□ 0.06
RTN3-205ENST00000356000 LDAHQ9H6V9 325 aa15.43■□□□□ 0.06
RTN3-205ENST00000356000 HEXA-AS1Q9H8Q6 139 aa15.43■□□□□ 0.06
RTN3-205ENST00000356000 RAB23Q9ULC3 237 aa15.43■□□□□ 0.06
RTN3-205ENST00000356000 ACOT9Q9Y305 439 aa15.43■□□□□ 0.06
RTN3-205ENST00000356000 ALG5Q9Y673 324 aa15.43■□□□□ 0.06
RTN3-205ENST00000356000 IRS2Q9Y4H2 1338 aa15.43■□□□□ 0.06
RTN3-205ENST00000356000 SH3BP5O60239 455 aa15.43■□□□□ 0.06
RTN3-205ENST00000356000 ANXA6P08133 673 aa15.43■□□□□ 0.06
RTN3-205ENST00000356000 SAT1P21673 171 aa15.43■□□□□ 0.06
RTN3-205ENST00000356000 PRKACGP22612 351 aa15.43■□□□□ 0.06
RTN3-205ENST00000356000 AVPR1AP37288 418 aa15.43■□□□□ 0.06
RTN3-205ENST00000356000 HUNKP57058 714 aa15.43■□□□□ 0.06
RTN3-205ENST00000356000 RPS8P62241 208 aaKnown RBP15.43■□□□□ 0.06
RTN3-205ENST00000356000 CYP4F2P78329 520 aa15.43■□□□□ 0.06
RTN3-205ENST00000356000 RUNX1T1Q06455 604 aa15.43■□□□□ 0.06
RTN3-205ENST00000356000 CYP4F3Q08477 520 aa15.43■□□□□ 0.06
RTN3-205ENST00000356000 RGMBQ6NW40 437 aa15.43■□□□□ 0.06
RTN3-205ENST00000356000 FAM183BPQ6ZVS7 135 aa15.43■□□□□ 0.06
RTN3-205ENST00000356000 C19orf60Q96EN9 201 aa15.43■□□□□ 0.06
RTN3-205ENST00000356000 ZSWIM3Q96MP5 696 aa15.43■□□□□ 0.06
RTN3-205ENST00000356000 CNPY3Q9BT09 278 aa15.43■□□□□ 0.06
RTN3-205ENST00000356000 SMURF1Q9HCE7 757 aa15.43■□□□□ 0.06
RTN3-205ENST00000356000 GPATCH2LQ9NWQ4 482 aa15.43■□□□□ 0.06
RTN3-205ENST00000356000 ERVW-1Q9UQF0 538 aa15.43■□□□□ 0.06
RTN3-205ENST00000356000 ANKRD28O15084 1053 aa15.42■□□□□ 0.06
RTN3-205ENST00000356000 TPOP07202 933 aa15.42■□□□□ 0.06
RTN3-205ENST00000356000 TAL1P17542 331 aaPredicted RBP15.42■□□□□ 0.06
RTN3-205ENST00000356000 CD72P21854 359 aa15.42■□□□□ 0.06
RTN3-205ENST00000356000 DCTP40126 519 aa15.42■□□□□ 0.06
RTN3-205ENST00000356000 ERVFC1P60507 584 aa15.42■□□□□ 0.06
RTN3-205ENST00000356000 HOXC5Q00444 222 aa15.42■□□□□ 0.06
RTN3-205ENST00000356000 GRM1Q13255 1194 aa15.42■□□□□ 0.06
RTN3-205ENST00000356000 DMP1Q13316 513 aaPredicted RBP15.42■□□□□ 0.06
RTN3-205ENST00000356000 KEAP1Q14145 624 aa15.42■□□□□ 0.06
RTN3-205ENST00000356000 FBXO43Q4G163 708 aa15.42■□□□□ 0.06
RTN3-205ENST00000356000 KLHL12Q53G59 568 aa15.42■□□□□ 0.06
RTN3-205ENST00000356000 FAM26DQ5JW98 314 aa15.42■□□□□ 0.06
RTN3-205ENST00000356000 MICALL2Q8IY33 904 aa15.42■□□□□ 0.06
RTN3-205ENST00000356000 CCDC36Q8IYA8 594 aa15.42■□□□□ 0.06
RTN3-205ENST00000356000 DTWD1Q8N5C7 304 aa15.42■□□□□ 0.06
RTN3-205ENST00000356000 ATOH1Q92858 354 aaPredicted RBP15.42■□□□□ 0.06
RTN3-205ENST00000356000 KMT5AQ9NQR1 393 aa15.42■□□□□ 0.06
RTN3-205ENST00000356000 DPP7Q9UHL4 492 aa15.42■□□□□ 0.06
RTN3-205ENST00000356000 CITO14578 2027 aa15.42■□□□□ 0.06
RTN3-205ENST00000356000 NEMP2A6NFY4 417 aa15.42■□□□□ 0.06
RTN3-205ENST00000356000 RECQL5O94762 991 aaPredicted RBP15.42■□□□□ 0.06
RTN3-205ENST00000356000 CSF2P04141 144 aa15.42■□□□□ 0.06
RTN3-205ENST00000356000 DAB2P98082 770 aa15.42■□□□□ 0.06
RTN3-205ENST00000356000 EMX2Q04743 252 aa15.42■□□□□ 0.06
RTN3-205ENST00000356000 CCDC149Q6ZUS6 474 aa15.42■□□□□ 0.06
RTN3-205ENST00000356000 TMEM179BQ7Z7N9 219 aa15.42■□□□□ 0.06
RTN3-205ENST00000356000 KCNMB4Q86W47 210 aa15.42■□□□□ 0.06
RTN3-205ENST00000356000 DCAF4Q8WV16 495 aa15.42■□□□□ 0.06
RTN3-205ENST00000356000 SIPA1Q96FS4 1042 aa15.42■□□□□ 0.06
RTN3-205ENST00000356000 CARS2Q9HA77 564 aaKnown RBP15.42■□□□□ 0.06
RTN3-205ENST00000356000 GBA2Q9HCG7 927 aaPredicted RBP15.42■□□□□ 0.06
RTN3-205ENST00000356000 SDR39U1Q9NRG7 319 aaPredicted RBP15.42■□□□□ 0.06
RTN3-205ENST00000356000 MYO18AQ92614 2054 aaKnown RBP15.42■□□□□ 0.06
RTN3-205ENST00000356000 WASHC1A8K0Z3 465 aa15.41■□□□□ 0.06
RTN3-205ENST00000356000 GNGT2O14610 69 aa15.41■□□□□ 0.06
RTN3-205ENST00000356000 APOC1P02654 83 aa15.41■□□□□ 0.06
RTN3-205ENST00000356000 RAB25P57735 213 aa15.41■□□□□ 0.06
RTN3-205ENST00000356000 TBCEQ15813 527 aaPredicted RBP15.41■□□□□ 0.06
RTN3-205ENST00000356000 FAM83EQ2M2I3 478 aa15.41■□□□□ 0.06
RTN3-205ENST00000356000 GPR158Q5T848 1215 aa15.41■□□□□ 0.06
RTN3-205ENST00000356000 CLEC6AQ6EIG7 209 aa15.41■□□□□ 0.06
RTN3-205ENST00000356000 AHSA2Q719I0 299 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms