RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 ITPKAP23677 461 aa25.05■■□□□ 1.6
CLK2-201ENST00000355560 BDKRB1P46663 353 aa25.05■■□□□ 1.6
CLK2-201ENST00000355560 THOP1P52888 689 aa25.05■■□□□ 1.6
CLK2-201ENST00000355560 PIGGQ5H8A4 983 aa25.05■■□□□ 1.6
CLK2-201ENST00000355560 HEATR4Q86WZ0 1026 aa25.05■■□□□ 1.6
CLK2-201ENST00000355560 CFAP206Q8IYR0 622 aa25.05■■□□□ 1.6
CLK2-201ENST00000355560 FOPNLQ96NB1 174 aa25.05■■□□□ 1.6
CLK2-201ENST00000355560 PCDHGA7Q9Y5G6 932 aa25.05■■□□□ 1.6
CLK2-201ENST00000355560 BBIP1A8MTZ0 92 aa25.04■■□□□ 1.6
CLK2-201ENST00000355560 VEGFDO43915 354 aa25.04■■□□□ 1.6
CLK2-201ENST00000355560 ULK1O75385 1050 aa25.04■■□□□ 1.6
CLK2-201ENST00000355560 CAPN3P20807 821 aa25.04■■□□□ 1.6
CLK2-201ENST00000355560 MRPL19P49406 292 aaKnown RBP25.04■■□□□ 1.6
CLK2-201ENST00000355560 PNCKQ6P2M8 343 aa25.04■■□□□ 1.6
CLK2-201ENST00000355560 MKRN2Q9H000 416 aaKnown RBP25.04■■□□□ 1.6
CLK2-201ENST00000355560 DNAJC11Q9NVH1 559 aa25.04■■□□□ 1.6
CLK2-201ENST00000355560 NTSR1P30989 418 aa25.04■■□□□ 1.6
CLK2-201ENST00000355560 MAPK9P45984 424 aa25.04■■□□□ 1.6
CLK2-201ENST00000355560 PSME3P61289 254 aa25.04■■□□□ 1.6
CLK2-201ENST00000355560 RPS14P62263 151 aaKnown RBP25.04■■□□□ 1.6
CLK2-201ENST00000355560 GRIK2Q13002 908 aa25.04■■□□□ 1.6
CLK2-201ENST00000355560 CPSF6Q16630 551 aaKnown RBP eCLIP25.04■■□□□ 1.6
CLK2-201ENST00000355560 VPS26BQ4G0F5 336 aa25.04■■□□□ 1.6
CLK2-201ENST00000355560 TMEM196Q5HYL7 178 aa25.04■■□□□ 1.6
CLK2-201ENST00000355560 ADAMTSL4Q6UY14 1074 aa25.04■■□□□ 1.6
CLK2-201ENST00000355560 OR2T3Q8NH03 318 aa25.04■■□□□ 1.6
CLK2-201ENST00000355560 SLC29A3Q9BZD2 475 aa25.04■■□□□ 1.6
CLK2-201ENST00000355560 CIDEBQ9UHD4 219 aa25.04■■□□□ 1.6
CLK2-201ENST00000355560 ZNF490Q9ULM2 529 aaPredicted RBP25.04■■□□□ 1.6
CLK2-201ENST00000355560 TMEM98Q9Y2Y6 226 aa25.04■■□□□ 1.6
CLK2-201ENST00000355560 CCL27Q9Y4X3 112 aa25.04■■□□□ 1.6
CLK2-201ENST00000355560 CEACAM7Q14002 265 aa25.03■■□□□ 1.6
CLK2-201ENST00000355560 STARD3Q14849 445 aa25.03■■□□□ 1.6
CLK2-201ENST00000355560 WSCD2Q2TBF2 565 aa25.03■■□□□ 1.6
CLK2-201ENST00000355560 AP5B1Q2VPB7 878 aa25.03■■□□□ 1.6
CLK2-201ENST00000355560 PLA2G4EQ3MJ16 856 aa25.03■■□□□ 1.6
CLK2-201ENST00000355560 CCSMST1Q4G0I0 132 aa25.03■■□□□ 1.6
CLK2-201ENST00000355560 LAYNQ6UX15 382 aa25.03■■□□□ 1.6
CLK2-201ENST00000355560 RNF165Q6ZSG1 346 aa25.03■■□□□ 1.6
CLK2-201ENST00000355560 RNF148Q8N7C7 305 aa25.03■■□□□ 1.6
CLK2-201ENST00000355560 COX14Q96I36 57 aa25.03■■□□□ 1.6
CLK2-201ENST00000355560 LINC00615Q96LM1 132 aaPredicted RBP25.03■■□□□ 1.6
CLK2-201ENST00000355560 TEX37Q96LM6 180 aa25.03■■□□□ 1.6
CLK2-201ENST00000355560 ZNHIT2Q9UHR6 403 aa25.03■■□□□ 1.6
CLK2-201ENST00000355560 GPR34Q9UPC5 381 aa25.03■■□□□ 1.6
CLK2-201ENST00000355560 MANBAO00462 879 aa25.03■■□□□ 1.6
CLK2-201ENST00000355560 ANGPT2O15123 496 aa25.03■■□□□ 1.6
CLK2-201ENST00000355560 RGS14O43566 566 aa25.03■■□□□ 1.6
CLK2-201ENST00000355560 SESN3P58005 492 aa25.03■■□□□ 1.6
CLK2-201ENST00000355560 PFN3P60673 137 aa25.03■■□□□ 1.6
CLK2-201ENST00000355560 COL19A1Q14993 1142 aa25.03■■□□□ 1.6
CLK2-201ENST00000355560 ZNF423Q2M1K9 1284 aa25.03■■□□□ 1.6
CLK2-201ENST00000355560 PDCD4Q53EL6 469 aaKnown RBP25.03■■□□□ 1.6
CLK2-201ENST00000355560 SGO1Q5FBB7 561 aa25.03■■□□□ 1.6
CLK2-201ENST00000355560 DOK6Q6PKX4 331 aa25.03■■□□□ 1.6
CLK2-201ENST00000355560 BLOC1S3Q6QNY0 202 aa25.03■■□□□ 1.6
CLK2-201ENST00000355560 RETREG3Q86VR2 466 aa25.03■■□□□ 1.6
CLK2-201ENST00000355560 PPP3R2Q96LZ3 170 aa25.03■■□□□ 1.6
CLK2-201ENST00000355560 CCDC138Q96M89 665 aa25.03■■□□□ 1.6
CLK2-201ENST00000355560 GABRG3Q99928 467 aa25.03■■□□□ 1.6
CLK2-201ENST00000355560 STX18Q9P2W9 335 aaKnown RBP25.03■■□□□ 1.6
CLK2-201ENST00000355560 ANP32DO95626 131 aa25.02■■□□□ 1.6
CLK2-201ENST00000355560 EGFP01133 1207 aa25.02■■□□□ 1.6
CLK2-201ENST00000355560 GNAZP19086 355 aa25.02■■□□□ 1.6
CLK2-201ENST00000355560 UFM1P61960 85 aa25.02■■□□□ 1.6
CLK2-201ENST00000355560 CDK3Q00526 305 aa25.02■■□□□ 1.6
CLK2-201ENST00000355560 EMX2Q04743 252 aa25.02■■□□□ 1.6
CLK2-201ENST00000355560 CCNIQ14094 377 aa25.02■■□□□ 1.6
CLK2-201ENST00000355560 ADGRE1Q14246 886 aa25.02■■□□□ 1.6
CLK2-201ENST00000355560 PON2Q15165 354 aa25.02■■□□□ 1.6
CLK2-201ENST00000355560 GGTA1PQ4G0N0 100 aa25.02■■□□□ 1.6
CLK2-201ENST00000355560 SLC44A4Q53GD3 710 aa25.02■■□□□ 1.6
CLK2-201ENST00000355560 SDE2Q6IQ49 451 aa25.02■■□□□ 1.6
CLK2-201ENST00000355560 IL17RCQ8NAC3 791 aa25.02■■□□□ 1.6
CLK2-201ENST00000355560 PCYOX1LQ8NBM8 494 aa25.02■■□□□ 1.6
CLK2-201ENST00000355560 USP7Q93009 1102 aa25.02■■□□□ 1.6
CLK2-201ENST00000355560 HEBP1Q9NRV9 189 aa25.02■■□□□ 1.6
CLK2-201ENST00000355560 ADA2Q9NZK5 511 aa25.02■■□□□ 1.6
CLK2-201ENST00000355560 STOX2Q9P2F5 926 aaPredicted RBP25.02■■□□□ 1.6
CLK2-201ENST00000355560 DOCK9Q9BZ29 2069 aa25.01■■□□□ 1.59
CLK2-201ENST00000355560 H3BQ06 376 aaPredicted RBP25.01■■□□□ 1.59
CLK2-201ENST00000355560 POP7O75817 140 aaKnown RBP25.01■■□□□ 1.59
CLK2-201ENST00000355560 KRT6AP02538 564 aa25.01■■□□□ 1.59
CLK2-201ENST00000355560 KRT6BP04259 564 aa25.01■■□□□ 1.59
CLK2-201ENST00000355560 KRT6CP48668 564 aa25.01■■□□□ 1.59
CLK2-201ENST00000355560 HMGCS1Q01581 520 aa25.01■■□□□ 1.59
CLK2-201ENST00000355560 RCAN2Q14206 197 aa25.01■■□□□ 1.59
CLK2-201ENST00000355560 RFTN2Q52LD8 501 aaPredicted RBP25.01■■□□□ 1.59
CLK2-201ENST00000355560 XKR5Q6UX68 686 aa25.01■■□□□ 1.59
CLK2-201ENST00000355560 HACD2Q6Y1H2 254 aa25.01■■□□□ 1.59
CLK2-201ENST00000355560 TRIM46Q7Z4K8 759 aa25.01■■□□□ 1.59
CLK2-201ENST00000355560 KCNV2Q8TDN2 545 aa25.01■■□□□ 1.59
CLK2-201ENST00000355560 GANCQ8TET4 914 aa25.01■■□□□ 1.59
CLK2-201ENST00000355560 ATL1Q8WXF7 558 aa25.01■■□□□ 1.59
CLK2-201ENST00000355560 JADE3Q92613 823 aa25.01■■□□□ 1.59
CLK2-201ENST00000355560 FBXL12Q9NXK8 326 aa25.01■■□□□ 1.59
CLK2-201ENST00000355560 NDUFAF1Q9Y375 327 aa25.01■■□□□ 1.59
CLK2-201ENST00000355560 PCYT1BQ9Y5K3 369 aaPredicted RBP25.01■■□□□ 1.59
CLK2-201ENST00000355560 C17orf113A0A1B0GUU1 675 aa25.01■■□□□ 1.59
CLK2-201ENST00000355560 E7ENX8 843 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms