RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 RPS14P62263 151 aaKnown RBP14.64□□□□□ -0.07
LMX1B-201ENST00000355497 SLC13A2Q13183 592 aa14.64□□□□□ -0.07
LMX1B-201ENST00000355497 CHERPQ8IWX8 916 aaKnown RBP14.64□□□□□ -0.07
LMX1B-201ENST00000355497 PPTC7Q8NI37 304 aa14.64□□□□□ -0.07
LMX1B-201ENST00000355497 ALKBH4Q9NXW9 302 aa14.64□□□□□ -0.07
LMX1B-201ENST00000355497 RUVBL1Q9Y265 456 aaKnown RBP14.64□□□□□ -0.07
LMX1B-201ENST00000355497 TOR1BO14657 336 aa14.64□□□□□ -0.07
LMX1B-201ENST00000355497 CPN2P22792 545 aa14.64□□□□□ -0.07
LMX1B-201ENST00000355497 UGT1A3P35503 534 aa14.64□□□□□ -0.07
LMX1B-201ENST00000355497 ILF3Q12906 894 aaKnown RBP eCLIP14.64□□□□□ -0.07
LMX1B-201ENST00000355497 RALGPS1Q5JS13 557 aa14.64□□□□□ -0.07
LMX1B-201ENST00000355497 OGFRL1Q5TC84 451 aaPredicted RBP14.64□□□□□ -0.07
LMX1B-201ENST00000355497 FSTL4Q6MZW2 842 aa14.64□□□□□ -0.07
LMX1B-201ENST00000355497 NDRG1Q92597 394 aaKnown RBP14.64□□□□□ -0.07
LMX1B-201ENST00000355497 HMCESQ96FZ2 354 aa14.64□□□□□ -0.07
LMX1B-201ENST00000355497 UCKL1Q9NWZ5 548 aa14.64□□□□□ -0.07
LMX1B-201ENST00000355497 TBX1O43435 398 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 TACSTD2P09758 323 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 CRISP3P54108 245 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 WSCD2Q2TBF2 565 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 KLHL26Q53HC5 615 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 IQCKQ8N0W5 287 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 IL31RAQ8NI17 732 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 PRICKLE1Q96MT3 831 aaPredicted RBP14.63□□□□□ -0.07
LMX1B-201ENST00000355497 SCGB3A2Q96PL1 93 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 ZNF471Q9BX82 626 aaPredicted RBP14.63□□□□□ -0.07
LMX1B-201ENST00000355497 CEP170BQ9Y4F5 1589 aaPredicted RBP14.63□□□□□ -0.07
LMX1B-201ENST00000355497 MYCLP1P12525 358 aaPredicted RBP14.63□□□□□ -0.07
LMX1B-201ENST00000355497 BMP6P22004 513 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 WASP42768 502 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 NDST2P52849 883 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 HSDL1Q3SXM5 330 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 GHDCQ8N2G8 530 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 OR6K6Q8NGW6 343 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 ZBED6CLQ96FA7 236 aaPredicted RBP14.63□□□□□ -0.07
LMX1B-201ENST00000355497 TBX5Q99593 518 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 POLR2J2Q9GZM3 115 aaKnown RBP14.63□□□□□ -0.07
LMX1B-201ENST00000355497 C14orf105Q9NVL8 296 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 GNA12Q03113 381 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 SCARB2Q14108 478 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 CYP2U1Q7Z449 544 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 RIPOR3Q96MK2 946 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 HSD17B14Q9BPX1 270 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 PCDHGC3Q9UN70 934 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 GRIN2DO15399 1336 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 SLC33A1O00400 549 aaPredicted RBP14.63□□□□□ -0.07
LMX1B-201ENST00000355497 NUAK1O60285 661 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 KAT7O95251 611 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 POP4O95707 220 aaKnown RBP14.63□□□□□ -0.07
LMX1B-201ENST00000355497 CYP17A1P05093 508 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 CHRM5P08912 532 aaPredicted RBP14.63□□□□□ -0.07
LMX1B-201ENST00000355497 OR4Q2P0C623 313 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 RBM48Q5RL73 367 aaKnown RBP14.63□□□□□ -0.07
LMX1B-201ENST00000355497 GPR153Q6NV75 609 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 FSTL5Q8N475 847 aaPredicted RBP14.63□□□□□ -0.07
LMX1B-201ENST00000355497 PNLDC1Q8NA58 520 aaKnown RBP14.63□□□□□ -0.07
LMX1B-201ENST00000355497 SMG7Q92540 1137 aaKnown RBP14.63□□□□□ -0.07
LMX1B-201ENST00000355497 SPOCK2Q92563 424 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 NKD2Q969F2 451 aaPredicted RBP14.63□□□□□ -0.07
LMX1B-201ENST00000355497 METTL8Q9H825 291 aaKnown RBP14.63□□□□□ -0.07
LMX1B-201ENST00000355497 SPEF1Q9Y4P9 236 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 SPIN1Q9Y657 262 aaPredicted RBP14.63□□□□□ -0.07
LMX1B-201ENST00000355497 PTPRMP28827 1452 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 FAM234BA2RU67 622 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 NPR2P20594 1047 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 PHC1P78364 1004 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 GANABQ14697 944 aaKnown RBP14.63□□□□□ -0.07
LMX1B-201ENST00000355497 FASTKD3Q14CZ7 662 aaKnown RBP14.63□□□□□ -0.07
LMX1B-201ENST00000355497 FAM110BQ8TC76 370 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 DUSP26Q9BV47 211 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 CADM1Q9BY67 442 aaKnown RBP14.63□□□□□ -0.07
LMX1B-201ENST00000355497 SRMSQ9H3Y6 488 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 RIMKLBQ9ULI2 386 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 CNTN6Q9UQ52 1028 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 REXO2Q9Y3B8 237 aaKnown RBP14.63□□□□□ -0.07
LMX1B-201ENST00000355497 PCDHGB1Q9Y5G3 927 aa14.63□□□□□ -0.07
LMX1B-201ENST00000355497 RBM47A0AV96 593 aaKnown RBP14.62□□□□□ -0.07
LMX1B-201ENST00000355497 SLC22A1O15245 554 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 CPNE3O75131 537 aaKnown RBP14.62□□□□□ -0.07
LMX1B-201ENST00000355497 ATP5A1P25705 553 aaKnown RBP14.62□□□□□ -0.07
LMX1B-201ENST00000355497 PGDP52209 483 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 MTPNP58546 118 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 ERVK-21P61565 698 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 TAF1AQ15573 450 aaPredicted RBP14.62□□□□□ -0.07
LMX1B-201ENST00000355497 FAM174BQ3ZCQ3 159 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 ATAT1Q5SQI0 421 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 ATAD1Q8NBU5 361 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 HCAR2Q8TDS4 363 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 KCTD7Q96MP8 289 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 MAGEH1Q9H213 219 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 GOLGA2P5Q9HBQ8 144 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 ABCG2Q9UNQ0 655 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 FCF1Q9Y324 198 aaKnown RBP14.62□□□□□ -0.07
LMX1B-201ENST00000355497 PCDHGA11Q9Y5H2 935 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 SEPT4O43236 478 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 BPNT1O95861 308 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 IFNA21P01568 189 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 ESR1P03372 595 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 ZNF3P17036 446 aa14.62□□□□□ -0.07
LMX1B-201ENST00000355497 PTGER3P43115 390 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms