RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 VTI1BQ9UEU0 232 aa15.2■□□□□ 0.02
CTSA-202ENST00000354880 PNMA8BQ9ULN7 279 aaPredicted RBP15.2■□□□□ 0.02
CTSA-202ENST00000354880 SLCO1B1Q9Y6L6 691 aa15.2■□□□□ 0.02
CTSA-202ENST00000354880 CEP192Q8TEP8 1941 aa15.2■□□□□ 0.02
CTSA-202ENST00000354880 SPTY2D1-AS1A0A0U1RR47 76 aa15.2■□□□□ 0.02
CTSA-202ENST00000354880 MEI4A8MW99 385 aa15.2■□□□□ 0.02
CTSA-202ENST00000354880 TMEM233B4DJY2 109 aa15.2■□□□□ 0.02
CTSA-202ENST00000354880 K7EPI3 171 aa15.2■□□□□ 0.02
CTSA-202ENST00000354880 ZNF195O14628 629 aa15.2■□□□□ 0.02
CTSA-202ENST00000354880 GIPC1O14908 333 aa15.2■□□□□ 0.02
CTSA-202ENST00000354880 SCAMP1O15126 338 aa15.2■□□□□ 0.02
CTSA-202ENST00000354880 HDAC3O15379 428 aa15.2■□□□□ 0.02
CTSA-202ENST00000354880 LRP8Q14114 963 aa15.2■□□□□ 0.02
CTSA-202ENST00000354880 RBBP7Q16576 425 aa15.2■□□□□ 0.02
CTSA-202ENST00000354880 ZXDCQ2QGD7 858 aaPredicted RBP15.2■□□□□ 0.02
CTSA-202ENST00000354880 ALG11Q2TAA5 492 aa15.2■□□□□ 0.02
CTSA-202ENST00000354880 CAPRIN2Q6IMN6 1127 aaKnown RBP15.2■□□□□ 0.02
CTSA-202ENST00000354880 FOXR1Q6PIV2 292 aa15.2■□□□□ 0.02
CTSA-202ENST00000354880 TSSK4Q6SA08 328 aa15.2■□□□□ 0.02
CTSA-202ENST00000354880 MAVSQ7Z434 540 aa15.2■□□□□ 0.02
CTSA-202ENST00000354880 AFAP1L2Q8N4X5 818 aa15.2■□□□□ 0.02
CTSA-202ENST00000354880 TEX9Q8N6V9 391 aa15.2■□□□□ 0.02
CTSA-202ENST00000354880 AGAP11Q8TF27 550 aa15.2■□□□□ 0.02
CTSA-202ENST00000354880 KLHDC7BQ96G42 594 aa15.2■□□□□ 0.02
CTSA-202ENST00000354880 RMDN2Q96LZ7 410 aa15.2■□□□□ 0.02
CTSA-202ENST00000354880 HSPA12BQ96MM6 686 aa15.2■□□□□ 0.02
CTSA-202ENST00000354880 PKP4Q99569 1192 aa15.2■□□□□ 0.02
CTSA-202ENST00000354880 SLC32A1Q9H598 525 aa15.2■□□□□ 0.02
CTSA-202ENST00000354880 STN1Q9H668 368 aaKnown RBP15.2■□□□□ 0.02
CTSA-202ENST00000354880 NOL11Q9H8H0 719 aaKnown RBP15.2■□□□□ 0.02
CTSA-202ENST00000354880 ANGPTL3Q9Y5C1 460 aa15.2■□□□□ 0.02
CTSA-202ENST00000354880 ST14Q9Y5Y6 855 aa15.2■□□□□ 0.02
CTSA-202ENST00000354880 DGKBQ9Y6T7 804 aa15.2■□□□□ 0.02
CTSA-202ENST00000354880 ZDBF2Q9HCK1 2354 aa15.19■□□□□ 0.02
CTSA-202ENST00000354880 SLC16A8O95907 504 aa15.19■□□□□ 0.02
CTSA-202ENST00000354880 RPN2P04844 631 aa15.19■□□□□ 0.02
CTSA-202ENST00000354880 FGF4P08620 206 aa15.19■□□□□ 0.02
CTSA-202ENST00000354880 BCKDHBP21953 392 aa15.19■□□□□ 0.02
CTSA-202ENST00000354880 SLC6A12P48065 614 aa15.19■□□□□ 0.02
CTSA-202ENST00000354880 PTCHD3Q3KNS1 767 aa15.19■□□□□ 0.02
CTSA-202ENST00000354880 ZNF771Q7L3S4 317 aaPredicted RBP15.19■□□□□ 0.02
CTSA-202ENST00000354880 HID1Q8IV36 788 aa15.19■□□□□ 0.02
CTSA-202ENST00000354880 FAR2Q96K12 515 aa15.19■□□□□ 0.02
CTSA-202ENST00000354880 ZNF382Q96SR6 550 aa15.19■□□□□ 0.02
CTSA-202ENST00000354880 PRMT8Q9NR22 394 aaPredicted RBP15.19■□□□□ 0.02
CTSA-202ENST00000354880 DNAJC28Q9NX36 388 aa15.19■□□□□ 0.02
CTSA-202ENST00000354880 STOX2Q9P2F5 926 aaPredicted RBP15.19■□□□□ 0.02
CTSA-202ENST00000354880 WDR37Q9Y2I8 494 aa15.19■□□□□ 0.02
CTSA-202ENST00000354880 FIS1Q9Y3D6 152 aa15.19■□□□□ 0.02
CTSA-202ENST00000354880 TRAF6Q9Y4K3 522 aa15.19■□□□□ 0.02
CTSA-202ENST00000354880 KNL1Q8NG31 2342 aa15.18■□□□□ 0.02
CTSA-202ENST00000354880 LRP4O75096 1905 aa15.18■□□□□ 0.02
CTSA-202ENST00000354880 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.18■□□□□ 0.02
CTSA-202ENST00000354880 A0A1B0GTL3 188 aa15.18■□□□□ 0.02
CTSA-202ENST00000354880 TMEM221A6NGB7 291 aa15.18■□□□□ 0.02
CTSA-202ENST00000354880 ERICH4A6NGS2 130 aa15.18■□□□□ 0.02
CTSA-202ENST00000354880 PDZK1P1A8MUH7 402 aa15.18■□□□□ 0.02
CTSA-202ENST00000354880 M0R296 226 aa15.18■□□□□ 0.02
CTSA-202ENST00000354880 MYO1CO00159 1063 aa15.18■□□□□ 0.02
CTSA-202ENST00000354880 ESRRBO95718 433 aa15.18■□□□□ 0.02
CTSA-202ENST00000354880 EPB42P16452 691 aa15.18■□□□□ 0.02
CTSA-202ENST00000354880 MAOBP27338 520 aa15.18■□□□□ 0.02
CTSA-202ENST00000354880 PIK3CGP48736 1102 aa15.18■□□□□ 0.02
CTSA-202ENST00000354880 RACK1P63244 317 aaKnown RBP15.18■□□□□ 0.02
CTSA-202ENST00000354880 CTBSQ01459 385 aa15.18■□□□□ 0.02
CTSA-202ENST00000354880 LRRC70Q7Z2Q7 622 aa15.18■□□□□ 0.02
CTSA-202ENST00000354880 DCP2Q8IU60 420 aaKnown RBP15.18■□□□□ 0.02
CTSA-202ENST00000354880 DCUN1D3Q8IWE4 304 aa15.18■□□□□ 0.02
CTSA-202ENST00000354880 TMEFF1Q8IYR6 380 aa15.18■□□□□ 0.02
CTSA-202ENST00000354880 CLYBLQ8N0X4 340 aa15.18■□□□□ 0.02
CTSA-202ENST00000354880 MFSD2AQ8NA29 543 aa15.18■□□□□ 0.02
CTSA-202ENST00000354880 OR52B6Q8NGF0 335 aa15.18■□□□□ 0.02
CTSA-202ENST00000354880 OR5AR1Q8NGP9 310 aa15.18■□□□□ 0.02
CTSA-202ENST00000354880 OR9A1PQ8NGU1 263 aa15.18■□□□□ 0.02
CTSA-202ENST00000354880 OR5K2Q8NHB8 316 aa15.18■□□□□ 0.02
CTSA-202ENST00000354880 RAD51AP1Q96B01 352 aa15.18■□□□□ 0.02
CTSA-202ENST00000354880 C12orf66Q96MD2 445 aa15.18■□□□□ 0.02
CTSA-202ENST00000354880 EBF4Q9BQW3 602 aa15.18■□□□□ 0.02
CTSA-202ENST00000354880 TMEM168Q9H0V1 697 aa15.18■□□□□ 0.02
CTSA-202ENST00000354880 ATG10Q9H0Y0 220 aa15.18■□□□□ 0.02
CTSA-202ENST00000354880 IPPKQ9H8X2 491 aa15.18■□□□□ 0.02
CTSA-202ENST00000354880 TRNAU1APQ9NX07 287 aaKnown RBP15.18■□□□□ 0.02
CTSA-202ENST00000354880 CIDEBQ9UHD4 219 aa15.18■□□□□ 0.02
CTSA-202ENST00000354880 STK38LQ9Y2H1 464 aa15.18■□□□□ 0.02
CTSA-202ENST00000354880 CFAP20Q9Y6A4 193 aaKnown RBP15.18■□□□□ 0.02
CTSA-202ENST00000354880 AZIN1O14977 448 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 LAMTOR5O43504 91 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 WDR47O94967 919 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 RASGRP1O95267 797 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 OTCP00480 354 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 TNFP01375 233 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 CD38P28907 300 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 IMPA1P29218 277 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 PRDX3P30048 256 aaKnown RBP15.17■□□□□ 0.02
CTSA-202ENST00000354880 PKNOX1P55347 436 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 FZD2Q14332 565 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 PDCD2Q16342 344 aaPredicted RBP15.17■□□□□ 0.02
CTSA-202ENST00000354880 UAP1L1Q3KQV9 507 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 VWA5B1Q5TIE3 1220 aa15.17■□□□□ 0.02
CTSA-202ENST00000354880 CLEC6AQ6EIG7 209 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms