RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 ICKQ9UPZ9 632 aa21.53■■□□□ 1.04
SHMT1-203ENST00000354098 KRT37O76014 449 aa21.53■■□□□ 1.04
SHMT1-203ENST00000354098 RPN2P04844 631 aa21.53■■□□□ 1.04
SHMT1-203ENST00000354098 C2P06681 752 aa21.53■■□□□ 1.04
SHMT1-203ENST00000354098 CRABP2P29373 138 aa21.53■■□□□ 1.04
SHMT1-203ENST00000354098 TYK2P29597 1187 aa21.53■■□□□ 1.04
SHMT1-203ENST00000354098 PPM1FP49593 454 aaPredicted RBP21.53■■□□□ 1.04
SHMT1-203ENST00000354098 SERPINB8P50452 374 aa21.53■■□□□ 1.04
SHMT1-203ENST00000354098 EPHA4P54764 986 aa21.53■■□□□ 1.04
SHMT1-203ENST00000354098 INSM1Q01101 510 aaPredicted RBP21.53■■□□□ 1.04
SHMT1-203ENST00000354098 BEND6Q5SZJ8 279 aaPredicted RBP21.53■■□□□ 1.04
SHMT1-203ENST00000354098 UBE2R2Q712K3 238 aaPredicted RBP21.53■■□□□ 1.04
SHMT1-203ENST00000354098 TMPRSS9Q7Z410 1059 aa21.53■■□□□ 1.04
SHMT1-203ENST00000354098 LMNTD1Q8N9Z9 388 aa21.53■■□□□ 1.04
SHMT1-203ENST00000354098 RSC1A1Q92681 617 aa21.53■■□□□ 1.04
SHMT1-203ENST00000354098 UBXN10Q96LJ8 280 aa21.53■■□□□ 1.04
SHMT1-203ENST00000354098 TFB2MQ9H5Q4 396 aaKnown RBP21.53■■□□□ 1.04
SHMT1-203ENST00000354098 PLAAQ9Y263 795 aa21.53■■□□□ 1.04
SHMT1-203ENST00000354098 SPTBN4Q9H254 2564 aa21.52■■□□□ 1.04
SHMT1-203ENST00000354098 CDC7O00311 574 aa21.52■■□□□ 1.04
SHMT1-203ENST00000354098 NTN3O00634 580 aaPredicted RBP21.52■■□□□ 1.04
SHMT1-203ENST00000354098 TCEA3O75764 348 aa21.52■■□□□ 1.04
SHMT1-203ENST00000354098 IRF9Q00978 393 aa21.52■■□□□ 1.04
SHMT1-203ENST00000354098 E2F1Q01094 437 aa21.52■■□□□ 1.04
SHMT1-203ENST00000354098 DLG1Q12959 904 aa21.52■■□□□ 1.04
SHMT1-203ENST00000354098 LGSNQ5TDP6 509 aa21.52■■□□□ 1.04
SHMT1-203ENST00000354098 OR10G6Q8NH81 332 aa21.52■■□□□ 1.04
SHMT1-203ENST00000354098 ISL2Q96A47 359 aa21.52■■□□□ 1.04
SHMT1-203ENST00000354098 AHCYL2Q96HN2 611 aaKnown RBP21.52■■□□□ 1.04
SHMT1-203ENST00000354098 IL17FQ96PD4 163 aa21.52■■□□□ 1.04
SHMT1-203ENST00000354098 MENTQ9BUN1 341 aa21.52■■□□□ 1.04
SHMT1-203ENST00000354098 EURLQ9NYK6 297 aa21.52■■□□□ 1.04
SHMT1-203ENST00000354098 A0A096LPK6 155 aa21.51■■□□□ 1.03
SHMT1-203ENST00000354098 FOXO6A8MYZ6 492 aa21.51■■□□□ 1.03
SHMT1-203ENST00000354098 ZBTB14O43829 449 aa21.51■■□□□ 1.03
SHMT1-203ENST00000354098 CATP04040 527 aaKnown RBP21.51■■□□□ 1.03
SHMT1-203ENST00000354098 PROS1P07225 676 aa21.51■■□□□ 1.03
SHMT1-203ENST00000354098 AMD1P17707 334 aa21.51■■□□□ 1.03
SHMT1-203ENST00000354098 CSF2RBP32927 897 aa21.51■■□□□ 1.03
SHMT1-203ENST00000354098 CCNFP41002 786 aa21.51■■□□□ 1.03
SHMT1-203ENST00000354098 MAGEA12P43365 314 aa21.51■■□□□ 1.03
SHMT1-203ENST00000354098 GPLD1P80108 840 aa21.51■■□□□ 1.03
SHMT1-203ENST00000354098 IFFO1Q0D2I5 559 aa21.51■■□□□ 1.03
SHMT1-203ENST00000354098 CSHL1Q14406 222 aa21.51■■□□□ 1.03
SHMT1-203ENST00000354098 TTC23LQ6PF05 361 aa21.51■■□□□ 1.03
SHMT1-203ENST00000354098 TDRPQ86YL5 185 aa21.51■■□□□ 1.03
SHMT1-203ENST00000354098 CYP4X1Q8N118 509 aa21.51■■□□□ 1.03
SHMT1-203ENST00000354098 MZB1Q8WU39 189 aa21.51■■□□□ 1.03
SHMT1-203ENST00000354098 NCSTNQ92542 709 aa21.51■■□□□ 1.03
SHMT1-203ENST00000354098 RAD51AP1Q96B01 352 aa21.51■■□□□ 1.03
SHMT1-203ENST00000354098 GFM1Q96RP9 751 aaKnown RBP21.51■■□□□ 1.03
SHMT1-203ENST00000354098 NUDT22Q9BRQ3 303 aa21.51■■□□□ 1.03
SHMT1-203ENST00000354098 SRMSQ9H3Y6 488 aa21.51■■□□□ 1.03
SHMT1-203ENST00000354098 ACOT9Q9Y305 439 aa21.51■■□□□ 1.03
SHMT1-203ENST00000354098 IQANK1A0A1B0GTG1 560 aa21.5■■□□□ 1.03
SHMT1-203ENST00000354098 TLDC2A0PJX2 215 aa21.5■■□□□ 1.03
SHMT1-203ENST00000354098 OR6C74A6NCV1 312 aa21.5■■□□□ 1.03
SHMT1-203ENST00000354098 NPEPPSL1A6NEC2 478 aa21.5■■□□□ 1.03
SHMT1-203ENST00000354098 ZW10O43264 779 aa21.5■■□□□ 1.03
SHMT1-203ENST00000354098 HOXB3P14651 431 aaPredicted RBP21.5■■□□□ 1.03
SHMT1-203ENST00000354098 PHKG1Q16816 387 aa21.5■■□□□ 1.03
SHMT1-203ENST00000354098 AMIGO1Q86WK6 493 aa21.5■■□□□ 1.03
SHMT1-203ENST00000354098 HNRNPLLQ8WVV9 542 aaKnown RBP21.5■■□□□ 1.03
SHMT1-203ENST00000354098 ZBTB9Q96C00 473 aa21.5■■□□□ 1.03
SHMT1-203ENST00000354098 PKP4Q99569 1192 aa21.5■■□□□ 1.03
SHMT1-203ENST00000354098 SLC12A9Q9BXP2 914 aa21.5■■□□□ 1.03
SHMT1-203ENST00000354098 DERL2Q9GZP9 239 aa21.5■■□□□ 1.03
SHMT1-203ENST00000354098 TMEM9Q9P0T7 183 aa21.5■■□□□ 1.03
SHMT1-203ENST00000354098 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.5■■□□□ 1.03
SHMT1-203ENST00000354098 TLK1Q9UKI8 766 aa21.5■■□□□ 1.03
SHMT1-203ENST00000354098 PDE10AQ9Y233 779 aa21.5■■□□□ 1.03
SHMT1-203ENST00000354098 BTN3A3O00478 584 aa21.5■■□□□ 1.03
SHMT1-203ENST00000354098 BTN3A1O00481 513 aa21.5■■□□□ 1.03
SHMT1-203ENST00000354098 RASGRF2O14827 1237 aa21.5■■□□□ 1.03
SHMT1-203ENST00000354098 DUX1O43812 170 aa21.5■■□□□ 1.03
SHMT1-203ENST00000354098 RFPL1O75677 317 aa21.5■■□□□ 1.03
SHMT1-203ENST00000354098 SYF2O95926 243 aaKnown RBP21.5■■□□□ 1.03
SHMT1-203ENST00000354098 C8GP07360 202 aa21.5■■□□□ 1.03
SHMT1-203ENST00000354098 CD1DP15813 335 aa21.5■■□□□ 1.03
SHMT1-203ENST00000354098 SPIDRQ14159 915 aa21.5■■□□□ 1.03
SHMT1-203ENST00000354098 ZNF574Q6ZN55 896 aaPredicted RBP21.5■■□□□ 1.03
SHMT1-203ENST00000354098 CENPLQ8N0S6 344 aaPredicted RBP21.5■■□□□ 1.03
SHMT1-203ENST00000354098 C2orf73Q8N5S3 287 aaPredicted RBP21.5■■□□□ 1.03
SHMT1-203ENST00000354098 MAGEC3Q8TD91 643 aa21.5■■□□□ 1.03
SHMT1-203ENST00000354098 DENND1AQ8TEH3 1009 aa21.5■■□□□ 1.03
SHMT1-203ENST00000354098 KCTD4Q8WVF5 259 aa21.5■■□□□ 1.03
SHMT1-203ENST00000354098 NXNL1Q96CM4 212 aa21.5■■□□□ 1.03
SHMT1-203ENST00000354098 MTBPQ96DY7 904 aa21.5■■□□□ 1.03
SHMT1-203ENST00000354098 VPS11Q9H270 941 aa21.5■■□□□ 1.03
SHMT1-203ENST00000354098 PPCSQ9HAB8 311 aa21.5■■□□□ 1.03
SHMT1-203ENST00000354098 IGSF5Q9NSI5 407 aa21.5■■□□□ 1.03
SHMT1-203ENST00000354098 HRASLS2Q9NWW9 162 aa21.5■■□□□ 1.03
SHMT1-203ENST00000354098 CPNE6O95741 557 aa21.49■■□□□ 1.03
SHMT1-203ENST00000354098 MPSTP25325 297 aa21.49■■□□□ 1.03
SHMT1-203ENST00000354098 MAP4P27816 1152 aaKnown RBP21.49■■□□□ 1.03
SHMT1-203ENST00000354098 CAPZBP47756 277 aa21.49■■□□□ 1.03
SHMT1-203ENST00000354098 PPP1CAP62136 330 aa21.49■■□□□ 1.03
SHMT1-203ENST00000354098 SQSTM1Q13501 440 aa21.49■■□□□ 1.03
SHMT1-203ENST00000354098 TSNQ15631 228 aaKnown RBP21.49■■□□□ 1.03
SHMT1-203ENST00000354098 N4BP2L1Q5TBK1 243 aaPredicted RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms