RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 HOXD8P13378 290 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-201ENST00000352993 DDOSTP39656 456 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 CREMQ03060 361 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 ELP6Q0PNE2 266 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 BTBD16Q32M84 506 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 CACHD1Q5VU97 1274 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 PRAMEF18Q5VWM3 479 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 DLEU7Q6UYE1 221 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 GALNT10Q86SR1 603 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 DTX3Q8N9I9 347 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 OR56A4Q8NGH8 313 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 UTP15Q8TED0 518 aaKnown RBP7.48□□□□□ -1.21
BRCA1-201ENST00000352993 DPY30Q9C005 99 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 DYRK4Q9NR20 520 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 KCNN3Q9UGI6 736 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 EIF2B4Q9UI10 523 aaKnown RBP7.48□□□□□ -1.21
BRCA1-201ENST00000352993 FBXW11Q9UKB1 542 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 SCN9AQ15858 1988 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 MGAMO43451 1857 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 IGKV6D-21A0A0A0MT36 114 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 I6L893 689 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-201ENST00000352993 DSCR3O14972 297 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 KIAA0513O60268 411 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 SCELO95171 688 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 S1PR4O95977 384 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 PSKH1P11801 424 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 NPR3P17342 541 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 CBLP22681 906 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 TGFBR2P37173 567 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 PTGR1Q14914 329 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 MAD2L1BPQ15013 274 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-201ENST00000352993 GPAT3Q53EU6 434 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 Q5BKY6 102 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 TWF2Q6IBS0 349 aaKnown RBP7.48□□□□□ -1.21
BRCA1-201ENST00000352993 PAQR3Q6TCH7 311 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 Q6ZPB1 254 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-201ENST00000352993 CEP68Q76N32 757 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 CDH24Q86UP0 819 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 ANKRD46Q86W74 232 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 B3GALNT2Q8NCR0 500 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 ENKURQ8TC29 256 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 NETO1Q8TDF5 533 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 SLC13A3Q8WWT9 602 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 DEDD2Q8WXF8 326 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 KLHL5Q96PQ7 755 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 ZSCAN5AQ9BUG6 496 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 TM9SF3Q9HD45 589 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 SLC52A3Q9NQ40 469 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 ZC4H2Q9NQZ6 224 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 GRIP1Q9Y3R0 1128 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 HSPB11Q9Y547 144 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 MIA3Q5JRA6 1907 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 HMX3A6NHT5 357 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 CDK2AP1O14519 115 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 FFAR3O14843 346 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 GPR42O15529 346 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 ECI2O75521 394 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 SLITRK5O94991 958 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 ICAM3P32942 547 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 MAPK12P53778 367 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 BACE1P56817 501 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 RPP38P78345 283 aaKnown RBP7.48□□□□□ -1.21
BRCA1-201ENST00000352993 RUNX1T1Q06455 604 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 RAD51Q06609 339 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 FADDQ13158 208 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 CCDC85BQ15834 202 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-201ENST00000352993 ZNF549Q6P9A3 640 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 PAMR1Q6UXH9 720 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 TMPRSS11AQ6ZMR5 421 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 ZNF675Q8TD23 568 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 IPCEF1Q8WWN9 437 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-201ENST00000352993 MYDGFQ969H8 173 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 PMEPA1Q969W9 287 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 NACC2Q96BF6 587 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 MRGPRX2Q96LB1 330 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 ZNF599Q96NL3 588 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 KCNC2Q96PR1 638 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 CNPPD1Q9BV87 410 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 DUSP16Q9BY84 665 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 VNN3Q9NY84 501 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 NPAP1Q9NZP6 1156 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 VPS4AQ9UN37 437 aa7.48□□□□□ -1.21
BRCA1-201ENST00000352993 B8ZZF3 427 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 ITGB1P05556 798 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 SERPINF2P08697 491 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 STSP08842 583 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 INSRRP14616 1297 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 SLC9A3P48764 834 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 HTR6P50406 440 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 SCNN1GP51170 649 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 DAPP51397 102 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 GPR162Q16538 588 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 INTS6LQ5JSJ4 861 aaKnown RBP7.47□□□□□ -1.21
BRCA1-201ENST00000352993 ZNF484Q5JVG2 852 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 MRNIPQ6NTE8 343 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 RIOX2Q8IUF8 465 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 NLGN1Q8N2Q7 840 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 OR8H1Q8NGG4 311 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 ANGPTL6Q8NI99 470 aa7.47□□□□□ -1.21
BRCA1-201ENST00000352993 DNASE1L2Q92874 299 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms