RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 TATDN3Q17R31 274 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 FLYWCH1Q4VC44 716 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 SCIMPQ6UWF3 145 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 GLCCI1Q86VQ1 547 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 ZNF680Q8NEM1 530 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 CLEC4CQ8WTT0 213 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 TSPEARQ8WU66 669 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 IPCEF1Q8WWN9 437 aaPredicted RBP12.99□□□□□ -0.33
IFT88-202ENST00000351808 ZNF583Q96ND8 569 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 NSUN5Q96P11 429 aaKnown RBP12.99□□□□□ -0.33
IFT88-202ENST00000351808 ASAH2Q9NR71 780 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 GABRQQ9UN88 632 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 BPTFQ12830 3046 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 CLRN2A0PK11 232 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 FOSL1P15407 271 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 ALAS2P22557 587 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 KELP23276 732 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 DAPP51397 102 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 QPRTQ15274 297 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 ZNF789Q5FWF6 425 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 NAPEPLDQ6IQ20 393 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 TMPRSS11AQ6ZMR5 421 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 CCDC71Q8IV32 467 aaPredicted RBP12.99□□□□□ -0.33
IFT88-202ENST00000351808 CAMKK1Q8N5S9 505 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 CDYL2Q8N8U2 506 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 TTC29Q8NA56 475 aaPredicted RBP12.99□□□□□ -0.33
IFT88-202ENST00000351808 LINC00116Q8NCU8 138 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 SLAIN1Q8ND83 568 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 BLOC1S5Q8TDH9 187 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 FCGR1BQ92637 280 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 SERHL2Q9H4I8 314 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 CATSPERBQ9H7T0 1116 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 SMURF1Q9HCE7 757 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 ING3Q9NXR8 418 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 SLC2A6Q9UGQ3 507 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 OGDHLQ9ULD0 1010 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 ALG5Q9Y673 324 aa12.99□□□□□ -0.33
IFT88-202ENST00000351808 A0A1B0GTL3 188 aa12.98□□□□□ -0.33
IFT88-202ENST00000351808 A0A1W2PRG6 482 aa12.98□□□□□ -0.33
IFT88-202ENST00000351808 PCDHGA12O60330 932 aa12.98□□□□□ -0.33
IFT88-202ENST00000351808 SUPT20HL2P0C7V6 817 aa12.98□□□□□ -0.33
IFT88-202ENST00000351808 NFKB1P19838 968 aa12.98□□□□□ -0.33
IFT88-202ENST00000351808 PER3P56645 1201 aa12.98□□□□□ -0.33
IFT88-202ENST00000351808 CREMQ03060 361 aa12.98□□□□□ -0.33
IFT88-202ENST00000351808 KEAP1Q14145 624 aa12.98□□□□□ -0.33
IFT88-202ENST00000351808 GRM7Q14831 915 aa12.98□□□□□ -0.33
IFT88-202ENST00000351808 SYPL2Q5VXT5 272 aa12.98□□□□□ -0.33
IFT88-202ENST00000351808 DLEU7Q6UYE1 221 aa12.98□□□□□ -0.33
IFT88-202ENST00000351808 HIPK1Q86Z02 1210 aa12.98□□□□□ -0.33
IFT88-202ENST00000351808 CHURC1Q8WUH1 139 aa12.98□□□□□ -0.33
IFT88-202ENST00000351808 FAM162AQ96A26 154 aa12.98□□□□□ -0.33
IFT88-202ENST00000351808 ASIC4Q96FT7 647 aa12.98□□□□□ -0.33
IFT88-202ENST00000351808 SRRQ9GZT4 340 aa12.98□□□□□ -0.33
IFT88-202ENST00000351808 MRPL39Q9NYK5 338 aaKnown RBP12.98□□□□□ -0.33
IFT88-202ENST00000351808 ELF5Q9UKW6 265 aaPredicted RBP12.98□□□□□ -0.33
IFT88-202ENST00000351808 DICER1Q9UPY3 1922 aaKnown RBP12.98□□□□□ -0.33
IFT88-202ENST00000351808 NT5C1B-RDH14C9J2C7 533 aa12.98□□□□□ -0.33
IFT88-202ENST00000351808 NUPL2O15504 423 aaKnown RBP12.98□□□□□ -0.33
IFT88-202ENST00000351808 DFNA5O60443 496 aa12.98□□□□□ -0.33
IFT88-202ENST00000351808 ZNF254O75437 659 aa12.98□□□□□ -0.33
IFT88-202ENST00000351808 SLC19A1P41440 591 aa12.98□□□□□ -0.33
IFT88-202ENST00000351808 MAP2K6P52564 334 aa12.98□□□□□ -0.33
IFT88-202ENST00000351808 SEMA3AQ14563 771 aa12.98□□□□□ -0.33
IFT88-202ENST00000351808 GPR19Q15760 415 aa12.98□□□□□ -0.33
IFT88-202ENST00000351808 DCAF8Q5TAQ9 597 aa12.98□□□□□ -0.33
IFT88-202ENST00000351808 TEX261Q6UWH6 196 aa12.98□□□□□ -0.33
IFT88-202ENST00000351808 LAX1Q8IWV1 398 aa12.98□□□□□ -0.33
IFT88-202ENST00000351808 TIGD4Q8IY51 512 aa12.98□□□□□ -0.33
IFT88-202ENST00000351808 C9orf62Q8N4C0 152 aa12.98□□□□□ -0.33
IFT88-202ENST00000351808 OR2T12Q8NG77 320 aa12.98□□□□□ -0.33
IFT88-202ENST00000351808 ZNF675Q8TD23 568 aa12.98□□□□□ -0.33
IFT88-202ENST00000351808 SPNS1Q9H2V7 528 aa12.98□□□□□ -0.33
IFT88-202ENST00000351808 SETD4Q9NVD3 440 aa12.98□□□□□ -0.33
IFT88-202ENST00000351808 FAM198AQ9UFP1 575 aa12.98□□□□□ -0.33
IFT88-202ENST00000351808 SIX4Q9UIU6 781 aa12.98□□□□□ -0.33
IFT88-202ENST00000351808 DNMT3AQ9Y6K1 912 aaPredicted RBP12.98□□□□□ -0.33
IFT88-202ENST00000351808 U3KQ87 197 aa12.98□□□□□ -0.33
IFT88-202ENST00000351808 COL1A2P08123 1366 aa12.97□□□□□ -0.33
IFT88-202ENST00000351808 ZNF638Q14966 1978 aaKnown RBP12.97□□□□□ -0.33
IFT88-202ENST00000351808 EFCAB10A6NFE3 127 aa12.97□□□□□ -0.33
IFT88-202ENST00000351808 MRPS14O60783 128 aaKnown RBP12.97□□□□□ -0.33
IFT88-202ENST00000351808 EVI2BP34910 448 aa12.97□□□□□ -0.33
IFT88-202ENST00000351808 CCT3P49368 545 aaKnown RBP12.97□□□□□ -0.33
IFT88-202ENST00000351808 RGS6P49758 472 aa12.97□□□□□ -0.33
IFT88-202ENST00000351808 GPR85P60893 370 aa12.97□□□□□ -0.33
IFT88-202ENST00000351808 POU4F1Q01851 419 aa12.97□□□□□ -0.33
IFT88-202ENST00000351808 KDELC1Q6UW63 502 aa12.97□□□□□ -0.33
IFT88-202ENST00000351808 OR10A6Q8NH74 314 aa12.97□□□□□ -0.33
IFT88-202ENST00000351808 ZNF578Q96N58 590 aaPredicted RBP12.97□□□□□ -0.33
IFT88-202ENST00000351808 SLC35C2Q9NQQ7 365 aa12.97□□□□□ -0.33
IFT88-202ENST00000351808 AIG1Q9NVV5 245 aa12.97□□□□□ -0.33
IFT88-202ENST00000351808 MCUBQ9NWR8 336 aa12.97□□□□□ -0.33
IFT88-202ENST00000351808 MIOSQ9NXC5 875 aa12.97□□□□□ -0.33
IFT88-202ENST00000351808 SYNJ2BP-COX16A0A087WUM0 186 aa12.97□□□□□ -0.33
IFT88-202ENST00000351808 TRAV19A0A0A6YYK7 116 aa12.97□□□□□ -0.33
IFT88-202ENST00000351808 SEC22BO75396 215 aa12.97□□□□□ -0.33
IFT88-202ENST00000351808 WDR47O94967 919 aa12.97□□□□□ -0.33
IFT88-202ENST00000351808 FGF4P08620 206 aa12.97□□□□□ -0.33
IFT88-202ENST00000351808 CHMP24386 653 aa12.97□□□□□ -0.33
IFT88-202ENST00000351808 NOS2P35228 1153 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms