RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 PRR5P85299 388 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 STX3Q13277 289 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 LPIN1Q14693 890 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 MYBPC3Q14896 1274 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 CYP1B1Q16678 543 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 NRN1LQ496H8 165 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 FRA10AC1Q70Z53 315 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 DNAJC10Q8IXB1 793 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 RDM1Q8NG50 284 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 LPGAT1Q92604 370 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 HAPLN3Q96S86 360 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 OLFML3Q9NRN5 406 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 DDX18Q9NVP1 670 aaKnown RBP5.86□□□□□ -1.47
RFC1-201ENST00000349703 KLHL28Q9NXS3 571 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 TAS2R16Q9NYV7 291 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 CNOT6Q9ULM6 557 aaKnown RBP5.86□□□□□ -1.47
RFC1-201ENST00000349703 H3BNX3 289 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 TNFRSF10CO14798 259 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 CA12O43570 354 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 TDP2O95551 362 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 F7P08709 466 aaPredicted RBP5.86□□□□□ -1.47
RFC1-201ENST00000349703 OCM2P0CE71 109 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 OCMP0CE72 109 aaPredicted RBP5.86□□□□□ -1.47
RFC1-201ENST00000349703 EPORP19235 508 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 GYG1P46976 350 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 SOX10P56693 466 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 SNAPC2Q13487 334 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 RTP5Q14D33 572 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 SRSF7Q16629 238 aaKnown RBP eCLIP5.86□□□□□ -1.47
RFC1-201ENST00000349703 TMEM63BQ5T3F8 832 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 CNKSR3Q6P9H4 555 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 OTOAQ7RTW8 1153 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 OAFQ86UD1 273 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 SLC22A17Q8WUG5 538 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 C10orf82Q8WW14 230 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 RASSF5Q8WWW0 418 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 COPS5Q92905 334 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 SLAMF9Q96A28 289 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 PYCR2Q96C36 320 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 ZNF668Q96K58 619 aaPredicted RBP5.86□□□□□ -1.47
RFC1-201ENST00000349703 RIMS4Q9H426 269 aaPredicted RBP5.86□□□□□ -1.47
RFC1-201ENST00000349703 SLC6A20Q9NP91 592 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 RSL24D1Q9UHA3 163 aaKnown RBP5.86□□□□□ -1.47
RFC1-201ENST00000349703 MAD2L2Q9UI95 211 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 RAB26Q9ULW5 256 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 TCAF1Q9Y4C2 921 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 SQORQ9Y6N5 450 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 TMEM94Q12767 1356 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 HYKKA2RU49 373 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 TMEM191CA6NGB0 347 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 ANKRD61A6NGH8 418 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 KPNA4O00629 521 aaPredicted RBP5.86□□□□□ -1.47
RFC1-201ENST00000349703 NUAK1O60285 661 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 UGDHO60701 494 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 PMPCBO75439 489 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 TM7SF2O76062 418 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 DIRAS3O95661 229 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 HLA-DQA2P01906 255 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 CAPN1P07384 714 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 QDPRP09417 244 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 TMEM191BP0C7N4 346 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 PABPC4LP0CB38 370 aaKnown RBP5.86□□□□□ -1.47
RFC1-201ENST00000349703 ADORA2AP29274 412 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 TACR3P29371 465 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 PPP2R1BP30154 601 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 JAK3P52333 1124 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 SEC61A1P61619 476 aaKnown RBP5.86□□□□□ -1.47
RFC1-201ENST00000349703 YWHAEP62258 255 aaKnown RBP5.86□□□□□ -1.47
RFC1-201ENST00000349703 SNRPFP62306 86 aaKnown RBP5.86□□□□□ -1.47
RFC1-201ENST00000349703 IL18Q14116 193 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 TREML2Q5T2D2 321 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 OR52E8Q6IFG1 317 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 CATSPERGQ6ZRH7 1159 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 TRIM67Q6ZTA4 783 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 ZNF677Q86XU0 584 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 MIB1Q86YT6 1006 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 IQCF2Q8IXL9 164 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 IRGQQ8WZA9 623 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 DLG3Q92796 817 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 SLCO2A1Q92959 643 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 ZDHHC12Q96GR4 267 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 CNBD2Q96M20 576 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 ALPK1Q96QP1 1244 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 CFHR5Q9BXR6 569 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 MRPS7Q9Y2R9 242 aaKnown RBP5.86□□□□□ -1.47
RFC1-201ENST00000349703 RHODO00212 210 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 FCN1O00602 326 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 IDO1P14902 403 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 CDH3P22223 829 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 CCNOP22674 350 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 SLC6A6P31641 620 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 VAMP7P51809 220 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 TJAP1Q5JTD0 557 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 FUT10Q6P4F1 479 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 TMEM81Q6P7N7 255 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 TMEM270Q6UE05 265 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 OVCH2Q7RTZ1 564 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 BBS1Q8NFJ9 593 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 OR5T3Q8NGG3 340 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 PLEKHO2Q8TD55 490 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms