RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 THEM5Q8N1Q8 247 aa17.47■□□□□ 0.39
APP-202ENST00000348990 GTF2H4Q92759 462 aa17.47■□□□□ 0.39
APP-202ENST00000348990 TSSK3Q96PN8 268 aa17.47■□□□□ 0.39
APP-202ENST00000348990 FKBPLQ9UIM3 349 aa17.47■□□□□ 0.39
APP-202ENST00000348990 TMEM98Q9Y2Y6 226 aa17.47■□□□□ 0.39
APP-202ENST00000348990 SPO11Q9Y5K1 396 aa17.47■□□□□ 0.39
APP-202ENST00000348990 DNAH12Q6ZR08 3092 aa17.47■□□□□ 0.39
APP-202ENST00000348990 E2F3O00716 465 aa17.46■□□□□ 0.39
APP-202ENST00000348990 STX16O14662 325 aa17.46■□□□□ 0.39
APP-202ENST00000348990 RHOQP17081 205 aa17.46■□□□□ 0.39
APP-202ENST00000348990 MC4RP32245 332 aa17.46■□□□□ 0.39
APP-202ENST00000348990 CA8P35219 290 aa17.46■□□□□ 0.39
APP-202ENST00000348990 EIF2DP41214 584 aaKnown RBP17.46■□□□□ 0.39
APP-202ENST00000348990 BEX3Q00994 111 aa17.46■□□□□ 0.39
APP-202ENST00000348990 MFSD10Q14728 455 aa17.46■□□□□ 0.39
APP-202ENST00000348990 PTPRRQ15256 657 aa17.46■□□□□ 0.39
APP-202ENST00000348990 CEP68Q76N32 757 aa17.46■□□□□ 0.39
APP-202ENST00000348990 GOLGA7Q7Z5G4 137 aa17.46■□□□□ 0.39
APP-202ENST00000348990 PIANPQ8IYJ0 282 aa17.46■□□□□ 0.39
APP-202ENST00000348990 AMER2Q8N7J2 671 aa17.46■□□□□ 0.39
APP-202ENST00000348990 PHF10Q8WUB8 498 aaKnown RBP17.46■□□□□ 0.39
APP-202ENST00000348990 IGSF8Q969P0 613 aa17.46■□□□□ 0.39
APP-202ENST00000348990 TPD52L3Q96J77 140 aa17.46■□□□□ 0.39
APP-202ENST00000348990 ZNF300Q96RE9 604 aaPredicted RBP17.46■□□□□ 0.39
APP-202ENST00000348990 CPNE5Q9HCH3 593 aa17.46■□□□□ 0.39
APP-202ENST00000348990 ACOT13Q9NPJ3 140 aa17.46■□□□□ 0.39
APP-202ENST00000348990 LTBP4Q8N2S1 1624 aa17.46■□□□□ 0.39
APP-202ENST00000348990 M0QZ92 97 aa17.46■□□□□ 0.39
APP-202ENST00000348990 STX7O15400 261 aaKnown RBP17.46■□□□□ 0.39
APP-202ENST00000348990 RGS5O15539 181 aa17.46■□□□□ 0.39
APP-202ENST00000348990 EIF2S1P05198 315 aaKnown RBP17.46■□□□□ 0.39
APP-202ENST00000348990 DEFA1P59665 94 aa17.46■□□□□ 0.39
APP-202ENST00000348990 DEFA3P59666 94 aa17.46■□□□□ 0.39
APP-202ENST00000348990 LRIT3Q3SXY7 679 aa17.46■□□□□ 0.39
APP-202ENST00000348990 SOWAHCQ53LP3 525 aaPredicted RBP17.46■□□□□ 0.39
APP-202ENST00000348990 PSAPL1Q6NUJ1 521 aa17.46■□□□□ 0.39
APP-202ENST00000348990 GPR153Q6NV75 609 aa17.46■□□□□ 0.39
APP-202ENST00000348990 ARMCX6Q7L4S7 300 aa17.46■□□□□ 0.39
APP-202ENST00000348990 SCD5Q86SK9 330 aa17.46■□□□□ 0.39
APP-202ENST00000348990 PJA1Q8NG27 643 aa17.46■□□□□ 0.39
APP-202ENST00000348990 REXO5Q96IC2 774 aaKnown RBP17.46■□□□□ 0.39
APP-202ENST00000348990 ZFYVE19Q96K21 471 aa17.46■□□□□ 0.39
APP-202ENST00000348990 CHCHD6Q9BRQ6 235 aa17.46■□□□□ 0.39
APP-202ENST00000348990 SLIRPQ9GZT3 109 aaKnown RBP17.46■□□□□ 0.39
APP-202ENST00000348990 NSUN3Q9H649 340 aaKnown RBP17.46■□□□□ 0.39
APP-202ENST00000348990 ATP13A1Q9HD20 1204 aa17.46■□□□□ 0.39
APP-202ENST00000348990 VNN3Q9NY84 501 aa17.46■□□□□ 0.39
APP-202ENST00000348990 TMEFF2Q9UIK5 374 aaPredicted RBP17.46■□□□□ 0.39
APP-202ENST00000348990 MIA3Q5JRA6 1907 aa17.46■□□□□ 0.39
APP-202ENST00000348990 CYP7B1O75881 506 aa17.46■□□□□ 0.39
APP-202ENST00000348990 MED26O95402 600 aa17.46■□□□□ 0.39
APP-202ENST00000348990 RYKP34925 604 aa17.46■□□□□ 0.39
APP-202ENST00000348990 PLEKHG6Q3KR16 790 aa17.46■□□□□ 0.39
APP-202ENST00000348990 MANEALQ5VSG8 457 aa17.46■□□□□ 0.39
APP-202ENST00000348990 ZCCHC8Q6NZY4 707 aaKnown RBP17.46■□□□□ 0.39
APP-202ENST00000348990 FBXL22Q6P050 247 aa17.46■□□□□ 0.39
APP-202ENST00000348990 OR10T2Q8NGX3 314 aa17.46■□□□□ 0.39
APP-202ENST00000348990 PYCR2Q96C36 320 aa17.46■□□□□ 0.39
APP-202ENST00000348990 PYURFQ96I23 114 aa17.46■□□□□ 0.39
APP-202ENST00000348990 PPP3R2Q96LZ3 170 aa17.46■□□□□ 0.39
APP-202ENST00000348990 RNF38Q9H0F5 515 aa17.46■□□□□ 0.39
APP-202ENST00000348990 WWOXQ9NZC7 414 aa17.46■□□□□ 0.39
APP-202ENST00000348990 AFF4Q9UHB7 1163 aaKnown RBP17.46■□□□□ 0.39
APP-202ENST00000348990 RGS14O43566 566 aa17.45■□□□□ 0.38
APP-202ENST00000348990 ULK1O75385 1050 aa17.45■□□□□ 0.38
APP-202ENST00000348990 IDH2P48735 452 aaKnown RBP17.45■□□□□ 0.38
APP-202ENST00000348990 NUDT6P53370 316 aa17.45■□□□□ 0.38
APP-202ENST00000348990 PHC1P78364 1004 aa17.45■□□□□ 0.38
APP-202ENST00000348990 SLC35A2P78381 396 aa17.45■□□□□ 0.38
APP-202ENST00000348990 GALNT7Q86SF2 657 aa17.45■□□□□ 0.38
APP-202ENST00000348990 MMAAQ8IVH4 418 aaKnown RBP17.45■□□□□ 0.38
APP-202ENST00000348990 ZNF382Q96SR6 550 aa17.45■□□□□ 0.38
APP-202ENST00000348990 NACA2Q9H009 215 aa17.45■□□□□ 0.38
APP-202ENST00000348990 NUAK2Q9H093 628 aa17.45■□□□□ 0.38
APP-202ENST00000348990 POPDC3Q9HBV1 291 aa17.45■□□□□ 0.38
APP-202ENST00000348990 FAM105AQ9NUU6 356 aa17.45■□□□□ 0.38
APP-202ENST00000348990 C14orf119Q9NWQ9 140 aa17.45■□□□□ 0.38
APP-202ENST00000348990 C1orf109Q9NX04 203 aa17.45■□□□□ 0.38
APP-202ENST00000348990 PCDHGC4Q9Y5F7 938 aa17.45■□□□□ 0.38
APP-202ENST00000348990 A0A096LPI6 279 aa17.45■□□□□ 0.38
APP-202ENST00000348990 ARL5CA6NH57 179 aa17.45■□□□□ 0.38
APP-202ENST00000348990 ARNTLO00327 626 aa17.45■□□□□ 0.38
APP-202ENST00000348990 CXCL11O14625 94 aa17.45■□□□□ 0.38
APP-202ENST00000348990 DYRK3O43781 588 aa17.45■□□□□ 0.38
APP-202ENST00000348990 KCNK2O95069 426 aa17.45■□□□□ 0.38
APP-202ENST00000348990 B3GALT4O96024 378 aa17.45■□□□□ 0.38
APP-202ENST00000348990 C21orf33P30042 268 aaPredicted RBP17.45■□□□□ 0.38
APP-202ENST00000348990 FCGRTP55899 365 aa17.45■□□□□ 0.38
APP-202ENST00000348990 CPSF6Q16630 551 aaKnown RBP eCLIP17.45■□□□□ 0.38
APP-202ENST00000348990 SLC39A12Q504Y0 691 aa17.45■□□□□ 0.38
APP-202ENST00000348990 CARD16Q5EG05 197 aa17.45■□□□□ 0.38
APP-202ENST00000348990 MS4A13Q5J8X5 152 aa17.45■□□□□ 0.38
APP-202ENST00000348990 C10orf120Q5SQS8 335 aa17.45■□□□□ 0.38
APP-202ENST00000348990 AFTPHQ6ULP2 937 aa17.45■□□□□ 0.38
APP-202ENST00000348990 UMODL1-AS1Q8N2C9 162 aa17.45■□□□□ 0.38
APP-202ENST00000348990 CELF2-AS1Q8N7Q2 184 aa17.45■□□□□ 0.38
APP-202ENST00000348990 ATP6V0D2Q8N8Y2 350 aa17.45■□□□□ 0.38
APP-202ENST00000348990 RHBDF1Q96CC6 855 aa17.45■□□□□ 0.38
APP-202ENST00000348990 YIPF6Q96EC8 236 aa17.45■□□□□ 0.38
APP-202ENST00000348990 COPS4Q9BT78 406 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms