RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 RNF111Q6ZNA4 994 aa16.76■□□□□ 0.27
SMARCC2-202ENST00000347471 PHC3Q8NDX5 983 aa16.76■□□□□ 0.27
SMARCC2-202ENST00000347471 PDLIM5Q96HC4 596 aaKnown RBP16.76■□□□□ 0.27
SMARCC2-202ENST00000347471 PPP1R16AQ96I34 528 aa16.76■□□□□ 0.27
SMARCC2-202ENST00000347471 SEPHS2Q99611 448 aa16.76■□□□□ 0.27
SMARCC2-202ENST00000347471 NUSAP1Q9BXS6 441 aaKnown RBP16.76■□□□□ 0.27
SMARCC2-202ENST00000347471 IGLON5A6NGN9 336 aa16.76■□□□□ 0.27
SMARCC2-202ENST00000347471 ZDHHC20Q5W0Z9 365 aa16.76■□□□□ 0.27
SMARCC2-202ENST00000347471 DHFR2Q86XF0 187 aa16.76■□□□□ 0.27
SMARCC2-202ENST00000347471 TRAM1L1Q8N609 369 aa16.76■□□□□ 0.27
SMARCC2-202ENST00000347471 SLC32A1Q9H598 525 aa16.76■□□□□ 0.27
SMARCC2-202ENST00000347471 LRTM1Q9HBL6 345 aa16.76■□□□□ 0.27
SMARCC2-202ENST00000347471 SDR39U1Q9NRG7 319 aaPredicted RBP16.76■□□□□ 0.27
SMARCC2-202ENST00000347471 MAP10Q9P2G4 905 aa16.76■□□□□ 0.27
SMARCC2-202ENST00000347471 GPR45Q9Y5Y3 372 aa16.76■□□□□ 0.27
SMARCC2-202ENST00000347471 PTPRSQ13332 1948 aa16.76■□□□□ 0.27
SMARCC2-202ENST00000347471 CATP04040 527 aaKnown RBP16.76■□□□□ 0.27
SMARCC2-202ENST00000347471 SRPRAP08240 638 aaKnown RBP16.76■□□□□ 0.27
SMARCC2-202ENST00000347471 MEF2AQ02078 507 aaPredicted RBP16.76■□□□□ 0.27
SMARCC2-202ENST00000347471 SAMD4BQ5PRF9 694 aaKnown RBP16.76■□□□□ 0.27
SMARCC2-202ENST00000347471 HENMT1Q5T8I9 393 aaKnown RBP16.76■□□□□ 0.27
SMARCC2-202ENST00000347471 NEK5Q6P3R8 708 aa16.76■□□□□ 0.27
SMARCC2-202ENST00000347471 NRTNQ99748 197 aa16.76■□□□□ 0.27
SMARCC2-202ENST00000347471 AIG1Q9NVV5 245 aa16.76■□□□□ 0.27
SMARCC2-202ENST00000347471 LMCD1Q9NZU5 365 aa16.76■□□□□ 0.27
SMARCC2-202ENST00000347471 HOXC11O43248 304 aaPredicted RBP16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 KLK8O60259 260 aa16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 VPS4BO75351 444 aa16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 SLC16A8O95907 504 aa16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 IL12AP29459 219 aa16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 AQP4P55087 323 aa16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 CDC16Q13042 620 aa16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 TRIM25Q14258 630 aaKnown RBP16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 NFE2L1Q14494 772 aa16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 PDE12Q6L8Q7 609 aaKnown RBP16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 PLA2G15Q8NCC3 412 aa16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 LRRC58Q96CX6 371 aa16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 IL17FQ96PD4 163 aa16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 FAM83CQ9BQN1 747 aa16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 CDH7Q9ULB5 785 aa16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 OR1A2Q9Y585 309 aa16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 ARHGEF33A8MVX0 844 aa16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 C1QTNF3-AMACRE9PGA6 284 aa16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 SLC22A2O15244 555 aa16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 TIPRLO75663 272 aa16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 PDYNP01213 254 aa16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 GNPDA1P46926 289 aa16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 DPPA4Q7L190 304 aa16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 TMPRSS11BQ86T26 416 aa16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 ETFBKMTQ8IXQ9 262 aa16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 HDDC3Q8N4P3 179 aa16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 FLCNQ8NFG4 579 aa16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 EME1Q96AY2 570 aa16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 DNAJC11Q9NVH1 559 aa16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 MCM8Q9UJA3 840 aa16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 ASF1AQ9Y294 204 aa16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 NME4O00746 187 aa16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 PSMA3P25788 255 aa16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 TMEM31Q5JXX7 168 aa16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 CACHD1Q5VU97 1274 aa16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 ERN2Q76MJ5 926 aaKnown RBP16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 PQLC1Q8N2U9 271 aa16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 FZD3Q9NPG1 666 aa16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 DTNAQ9Y4J8 743 aa16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 KIAA1671Q9BY89 1806 aa16.75■□□□□ 0.27
SMARCC2-202ENST00000347471 SAP18O00422 153 aaKnown RBP16.74■□□□□ 0.27
SMARCC2-202ENST00000347471 MANBAO00462 879 aa16.74■□□□□ 0.27
SMARCC2-202ENST00000347471 POP7O75817 140 aaKnown RBP16.74■□□□□ 0.27
SMARCC2-202ENST00000347471 FOXD4Q12950 439 aaPredicted RBP16.74■□□□□ 0.27
SMARCC2-202ENST00000347471 SFT2D3Q587I9 215 aa16.74■□□□□ 0.27
SMARCC2-202ENST00000347471 ADNP2Q6IQ32 1131 aa16.74■□□□□ 0.27
SMARCC2-202ENST00000347471 SPATA19Q7Z5L4 167 aa16.74■□□□□ 0.27
SMARCC2-202ENST00000347471 FAM110BQ8TC76 370 aa16.74■□□□□ 0.27
SMARCC2-202ENST00000347471 ASB11Q8WXH4 323 aa16.74■□□□□ 0.27
SMARCC2-202ENST00000347471 RSL1D1O76021 490 aaKnown RBP16.74■□□□□ 0.27
SMARCC2-202ENST00000347471 B3GALT4O96024 378 aa16.74■□□□□ 0.27
SMARCC2-202ENST00000347471 GBAP04062 536 aa16.74■□□□□ 0.27
SMARCC2-202ENST00000347471 GSTA3Q16772 222 aa16.74■□□□□ 0.27
SMARCC2-202ENST00000347471 SPANXN4Q5MJ08 99 aa16.74■□□□□ 0.27
SMARCC2-202ENST00000347471 SWT1Q5T5J6 900 aaKnown RBP16.74■□□□□ 0.27
SMARCC2-202ENST00000347471 BLOC1S3Q6QNY0 202 aa16.74■□□□□ 0.27
SMARCC2-202ENST00000347471 RD3Q7Z3Z2 195 aa16.74■□□□□ 0.27
SMARCC2-202ENST00000347471 OR14C36Q8NHC7 312 aa16.74■□□□□ 0.27
SMARCC2-202ENST00000347471 PKP2Q99959 881 aa16.74■□□□□ 0.27
SMARCC2-202ENST00000347471 TRMT61BQ9BVS5 477 aaKnown RBP16.74■□□□□ 0.27
SMARCC2-202ENST00000347471 SLC31A1O15431 190 aa16.74■□□□□ 0.27
SMARCC2-202ENST00000347471 C8GP07360 202 aa16.74■□□□□ 0.27
SMARCC2-202ENST00000347471 ELP6Q0PNE2 266 aa16.74■□□□□ 0.27
SMARCC2-202ENST00000347471 SYCE2Q6PIF2 218 aa16.74■□□□□ 0.27
SMARCC2-202ENST00000347471 PROKR1Q8TCW9 393 aa16.74■□□□□ 0.27
SMARCC2-202ENST00000347471 LRTOMTQ8WZ04 291 aa16.74■□□□□ 0.27
SMARCC2-202ENST00000347471 DTD2Q96FN9 168 aa16.74■□□□□ 0.27
SMARCC2-202ENST00000347471 AURKBQ96GD4 344 aaPredicted RBP16.74■□□□□ 0.27
SMARCC2-202ENST00000347471 KCTD14Q9BQ13 255 aaPredicted RBP16.74■□□□□ 0.27
SMARCC2-202ENST00000347471 TM7SF3Q9NS93 570 aa16.74■□□□□ 0.27
SMARCC2-202ENST00000347471 PPIL1Q9Y3C6 166 aa16.74■□□□□ 0.27
SMARCC2-202ENST00000347471 TRANK1O15050 2925 aa16.73■□□□□ 0.27
SMARCC2-202ENST00000347471 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.73■□□□□ 0.27
SMARCC2-202ENST00000347471 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.73■□□□□ 0.27
SMARCC2-202ENST00000347471 APODP05090 189 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms