RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 BPIFB6Q8NFQ5 453 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 NXPE3Q969Y0 559 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 HMCESQ96FZ2 354 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 TCF12Q99081 682 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 AARSD1Q9BTE6 412 aaKnown RBP10.7□□□□□ -0.7
CLCN6-202ENST00000346436 U3KQV3 271 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 USP54Q70EL1 1684 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 H7C0S8 307 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 MAN1A2O60476 641 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 ALDOAP04075 364 aaKnown RBP10.7□□□□□ -0.7
CLCN6-202ENST00000346436 FGF3P11487 239 aaPredicted RBP10.7□□□□□ -0.7
CLCN6-202ENST00000346436 RPS21P63220 83 aaKnown RBP10.7□□□□□ -0.7
CLCN6-202ENST00000346436 SPESP1Q6UW49 350 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 FAM180AQ6UWF9 173 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 GCNT7Q6ZNI0 430 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 SERINC5Q86VE9 423 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 ZDHHC13Q8IUH4 622 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 DEFB119Q8N690 84 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 CLHC1Q8NHS4 586 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 ZMAT2Q96NC0 199 aaKnown RBP10.7□□□□□ -0.7
CLCN6-202ENST00000346436 PLEKHG4BQ96PX9 1271 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 REXO4Q9GZR2 422 aaKnown RBP10.7□□□□□ -0.7
CLCN6-202ENST00000346436 DAPK2Q9UIK4 370 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 TCAF1Q9Y4C2 921 aa10.7□□□□□ -0.7
CLCN6-202ENST00000346436 ILVBLA1L0T0 632 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 LEFTY2O00292 366 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 MAGEB3O15480 346 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 ACP5P13686 325 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 MAGEA10P43363 369 aaPredicted RBP10.69□□□□□ -0.7
CLCN6-202ENST00000346436 MANFP55145 182 aaKnown RBP10.69□□□□□ -0.7
CLCN6-202ENST00000346436 RPL38P63173 70 aaKnown RBP10.69□□□□□ -0.7
CLCN6-202ENST00000346436 ARSIQ5FYB1 569 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 ARHGAP36Q6ZRI8 547 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 CBR4Q8N4T8 237 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 ENDOVQ8N8Q3 282 aaKnown RBP10.69□□□□□ -0.7
CLCN6-202ENST00000346436 SMYD1Q8NB12 490 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 PPM1MQ96MI6 270 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 OSBPL11Q9BXB4 747 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 UGT2B28Q9BY64 529 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 CALML5Q9NZT1 146 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 FBXW11Q9UKB1 542 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 INVSQ9Y283 1065 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 TSC22D4Q9Y3Q8 395 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 PRAMEF1O95521 474 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 ASMTP46597 345 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 IL23RQ5VWK5 629 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 RTL4Q6ZR62 310 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 DEPDC4Q8N2C3 294 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 OR7D4Q8NG98 312 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 RPL10LQ96L21 214 aaKnown RBP10.69□□□□□ -0.7
CLCN6-202ENST00000346436 PNPLA3Q9NST1 481 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 GPR34Q9UPC5 381 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 C10orf71Q711Q0 1435 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 FAM72CH0Y354 149 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 ACOT7O00154 380 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 CKMT2P17540 419 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 NTSR1P30989 418 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 TALDO1P37837 337 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 NSG1P42857 185 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 MRPL28Q13084 256 aaKnown RBP10.69□□□□□ -0.7
CLCN6-202ENST00000346436 RUNX3Q13761 415 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 FAM72AQ5TYM5 149 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 FAM72DQ6L9T8 149 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 FAM72BQ86X60 149 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 PLA2G15Q8NCC3 412 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 TEKT5Q96M29 485 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 FCRL3Q96P31 734 aaPredicted RBP10.69□□□□□ -0.7
CLCN6-202ENST00000346436 A8MU76 341 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 KMOO15229 486 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 KCNH1O95259 989 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 ATG7O95352 703 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 MYL12AP19105 171 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 ATG14Q6ZNE5 492 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 TMEM26Q6ZUK4 368 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 GPRIN3Q6ZVF9 776 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 OSTM1Q86WC4 334 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 OR4K17Q8NGC6 315 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 ZCCHC10Q8TBK6 192 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 TWIST2Q8WVJ9 160 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 CCDC106Q9BWC9 280 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 SLC2A11Q9BYW1 496 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 OR2AG1Q9H205 316 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 OXSMQ9NWU1 459 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 GDE1Q9NZC3 331 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 OAS3Q9Y6K5 1087 aaKnown RBP10.69□□□□□ -0.7
CLCN6-202ENST00000346436 LRP5O75197 1615 aa10.69□□□□□ -0.7
CLCN6-202ENST00000346436 E7ESA3 106 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 KLF11O14901 512 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 CCNB2O95067 398 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 PRKCGP05129 697 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 C8GP07360 202 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 PFKLP17858 780 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 VIPR1P32241 457 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 CASP9P55211 416 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 ADGRE1Q14246 886 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 SNX20Q7Z614 316 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 HORMAD2Q8N7B1 307 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 OR9I1Q8NGQ6 314 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 KLHL25Q9H0H3 589 aa10.68□□□□□ -0.7
CLCN6-202ENST00000346436 CLK4Q9HAZ1 481 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms