RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 NSG1P42857 185 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 CTSCP53634 463 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 CDKL1Q00532 357 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 ACDQ96AP0 544 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 ATOH8Q96SQ7 321 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 TMEM175Q9BSA9 504 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 EQTNQ9NQ60 294 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 OR1A2Q9Y585 309 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 TNPO3Q9Y5L0 923 aaKnown RBP13.03□□□□□ -0.32
CASC4-202ENST00000345795 CROCCQ5TZA2 2017 aa13.03□□□□□ -0.32
CASC4-202ENST00000345795 PNMA8CA0A1B0GUJ8 204 aa13.02□□□□□ -0.32
CASC4-202ENST00000345795 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.02□□□□□ -0.32
CASC4-202ENST00000345795 MROH6A6NGR9 719 aa13.02□□□□□ -0.32
CASC4-202ENST00000345795 PFDN1O60925 122 aa13.02□□□□□ -0.32
CASC4-202ENST00000345795 NME6O75414 186 aaPredicted RBP13.02□□□□□ -0.32
CASC4-202ENST00000345795 CLDN9O95484 217 aa13.02□□□□□ -0.32
CASC4-202ENST00000345795 ADGRE1Q14246 886 aa13.02□□□□□ -0.32
CASC4-202ENST00000345795 HSD11B1LQ7Z5J1 315 aa13.02□□□□□ -0.32
CASC4-202ENST00000345795 YIPF4Q9BSR8 244 aa13.02□□□□□ -0.32
CASC4-202ENST00000345795 RHBDL2Q9NX52 303 aa13.02□□□□□ -0.32
CASC4-202ENST00000345795 LHX3Q9UBR4 397 aa13.02□□□□□ -0.32
CASC4-202ENST00000345795 INSL6Q9Y581 213 aa13.02□□□□□ -0.32
CASC4-202ENST00000345795 PCDHGA7Q9Y5G6 932 aa13.02□□□□□ -0.32
CASC4-202ENST00000345795 TRIOO75962 3097 aa13.02□□□□□ -0.32
CASC4-202ENST00000345795 CACNA1EQ15878 2313 aa13.02□□□□□ -0.33
CASC4-202ENST00000345795 ABHD14A-ACY1A0A1B0GW23 586 aa13.02□□□□□ -0.33
CASC4-202ENST00000345795 ACP5P13686 325 aa13.02□□□□□ -0.33
CASC4-202ENST00000345795 CEBPBP17676 345 aa13.02□□□□□ -0.33
CASC4-202ENST00000345795 SELPLGQ14242 412 aa13.02□□□□□ -0.33
CASC4-202ENST00000345795 ZNF423Q2M1K9 1284 aa13.02□□□□□ -0.33
CASC4-202ENST00000345795 GPR107Q5VW38 600 aa13.02□□□□□ -0.33
CASC4-202ENST00000345795 NANOGP8Q6NSW7 305 aa13.02□□□□□ -0.33
CASC4-202ENST00000345795 TRAF7Q6Q0C0 670 aa13.02□□□□□ -0.33
CASC4-202ENST00000345795 LPCAT2Q7L5N7 544 aa13.02□□□□□ -0.33
CASC4-202ENST00000345795 DEFB119Q8N690 84 aa13.02□□□□□ -0.33
CASC4-202ENST00000345795 OR7A2PQ8NGA2 310 aa13.02□□□□□ -0.33
CASC4-202ENST00000345795 UBXN10Q96LJ8 280 aa13.02□□□□□ -0.33
CASC4-202ENST00000345795 BIRC8Q96P09 236 aa13.02□□□□□ -0.33
CASC4-202ENST00000345795 ASPSCR1Q9BZE9 553 aa13.02□□□□□ -0.33
CASC4-202ENST00000345795 DERL2Q9GZP9 239 aa13.02□□□□□ -0.33
CASC4-202ENST00000345795 NANOGQ9H9S0 305 aa13.02□□□□□ -0.33
CASC4-202ENST00000345795 PCTPQ9UKL6 214 aa13.02□□□□□ -0.33
CASC4-202ENST00000345795 LRRC42Q9Y546 428 aa13.02□□□□□ -0.33
CASC4-202ENST00000345795 OTOFQ9HC10 1997 aa13.02□□□□□ -0.33
CASC4-202ENST00000345795 LHCGRP22888 699 aa13.02□□□□□ -0.33
CASC4-202ENST00000345795 TACR1P25103 407 aa13.02□□□□□ -0.33
CASC4-202ENST00000345795 CCR7P32248 378 aa13.02□□□□□ -0.33
CASC4-202ENST00000345795 MTHFRP42898 656 aa13.02□□□□□ -0.33
CASC4-202ENST00000345795 MAPK9P45984 424 aa13.02□□□□□ -0.33
CASC4-202ENST00000345795 ZNF542PQ5EBM4 170 aa13.02□□□□□ -0.33
CASC4-202ENST00000345795 ZDHHC13Q8IUH4 622 aa13.02□□□□□ -0.33
CASC4-202ENST00000345795 TSPAN14Q8NG11 270 aa13.02□□□□□ -0.33
CASC4-202ENST00000345795 OR10G6Q8NH81 332 aa13.02□□□□□ -0.33
CASC4-202ENST00000345795 ASZ1Q8WWH4 475 aa13.02□□□□□ -0.33
CASC4-202ENST00000345795 THAP11Q96EK4 314 aa13.02□□□□□ -0.33
CASC4-202ENST00000345795 SLC6A17Q9H1V8 727 aa13.02□□□□□ -0.33
CASC4-202ENST00000345795 ACSL6Q9UKU0 697 aa13.02□□□□□ -0.33
CASC4-202ENST00000345795 SPEGQ15772 3267 aa13.01□□□□□ -0.33
CASC4-202ENST00000345795 K7EPI3 171 aa13.01□□□□□ -0.33
CASC4-202ENST00000345795 KIF1CO43896 1103 aaKnown RBP13.01□□□□□ -0.33
CASC4-202ENST00000345795 PRKD3O94806 890 aa13.01□□□□□ -0.33
CASC4-202ENST00000345795 LINGO3P0C6S8 592 aa13.01□□□□□ -0.33
CASC4-202ENST00000345795 ARHGDIAP52565 204 aa13.01□□□□□ -0.33
CASC4-202ENST00000345795 MESP2Q0VG99 397 aa13.01□□□□□ -0.33
CASC4-202ENST00000345795 TP53BP2Q13625 1128 aa13.01□□□□□ -0.33
CASC4-202ENST00000345795 RAB33AQ14088 237 aa13.01□□□□□ -0.33
CASC4-202ENST00000345795 FAM98BQ52LJ0 330 aaKnown RBP13.01□□□□□ -0.33
CASC4-202ENST00000345795 DHRSXQ8N5I4 330 aa13.01□□□□□ -0.33
CASC4-202ENST00000345795 KCNJ9Q92806 393 aa13.01□□□□□ -0.33
CASC4-202ENST00000345795 MAL2Q969L2 176 aa13.01□□□□□ -0.33
CASC4-202ENST00000345795 ARMC5Q96C12 935 aa13.01□□□□□ -0.33
CASC4-202ENST00000345795 SORBS1Q9BX66 1292 aaKnown RBP13.01□□□□□ -0.33
CASC4-202ENST00000345795 SPHK2Q9NRA0 654 aa13.01□□□□□ -0.33
CASC4-202ENST00000345795 MICAL3Q7RTP6 2002 aa13.01□□□□□ -0.33
CASC4-202ENST00000345795 FPGSQ05932 587 aa13.01□□□□□ -0.33
CASC4-202ENST00000345795 DMC1Q14565 340 aa13.01□□□□□ -0.33
CASC4-202ENST00000345795 AASDHQ4L235 1098 aaPredicted RBP13.01□□□□□ -0.33
CASC4-202ENST00000345795 RNF111Q6ZNA4 994 aa13.01□□□□□ -0.33
CASC4-202ENST00000345795 TPRG1Q6ZUI0 275 aa13.01□□□□□ -0.33
CASC4-202ENST00000345795 FUNDC1Q8IVP5 155 aa13.01□□□□□ -0.33
CASC4-202ENST00000345795 SMYD1Q8NB12 490 aa13.01□□□□□ -0.33
CASC4-202ENST00000345795 SLC13A3Q8WWT9 602 aa13.01□□□□□ -0.33
CASC4-202ENST00000345795 ELAC1Q9H777 363 aaKnown RBP13.01□□□□□ -0.33
CASC4-202ENST00000345795 POLR1BQ9H9Y6 1135 aa13.01□□□□□ -0.33
CASC4-202ENST00000345795 KCTD5Q9NXV2 234 aa13.01□□□□□ -0.33
CASC4-202ENST00000345795 DNMT3BQ9UBC3 853 aaKnown RBP13.01□□□□□ -0.33
CASC4-202ENST00000345795 PAPSS2O95340 614 aaPredicted RBP13.01□□□□□ -0.33
CASC4-202ENST00000345795 EPOP01588 193 aa13.01□□□□□ -0.33
CASC4-202ENST00000345795 FTH1P02794 183 aa13.01□□□□□ -0.33
CASC4-202ENST00000345795 ZNF33AQ06730 810 aa13.01□□□□□ -0.33
CASC4-202ENST00000345795 CCDC85BQ15834 202 aaPredicted RBP13.01□□□□□ -0.33
CASC4-202ENST00000345795 PIGGQ5H8A4 983 aa13.01□□□□□ -0.33
CASC4-202ENST00000345795 C1orf52Q8N6N3 182 aaKnown RBP13.01□□□□□ -0.33
CASC4-202ENST00000345795 FRMD1Q8N878 549 aa13.01□□□□□ -0.33
CASC4-202ENST00000345795 ENDOVQ8N8Q3 282 aaKnown RBP13.01□□□□□ -0.33
CASC4-202ENST00000345795 MAGEC3Q8TD91 643 aa13.01□□□□□ -0.33
CASC4-202ENST00000345795 HIC2Q96JB3 615 aa13.01□□□□□ -0.33
CASC4-202ENST00000345795 ZNF599Q96NL3 588 aa13.01□□□□□ -0.33
CASC4-202ENST00000345795 COMMD8Q9NX08 183 aa13.01□□□□□ -0.33
CASC4-202ENST00000345795 CLCA2Q9UQC9 943 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms