RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 EDDM13A0A1B0GTR0 161 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 TBC1D3BA6NDS4 549 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 UBDO15205 165 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 RAD51BO15315 384 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 TAPBPO15533 448 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 SGTAO43765 313 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 CRCPO75575 148 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 OR56A5P0C7T3 313 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 ELFN1P0C7U0 828 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 LINC00032P0C843 101 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 THRAP10827 490 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 ATP1B2P14415 290 aaPredicted RBP9.04□□□□□ -0.96
ATG4A-202ENST00000345734 EPHA1P21709 976 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 DCDC1P59894 354 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 CREB5Q02930 508 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 FCHO2Q0JRZ9 810 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 RUNX3Q13761 415 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 CYLC2Q14093 348 aaPredicted RBP9.04□□□□□ -0.96
ATG4A-202ENST00000345734 GRB7Q14451 532 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 LAPTM4AQ15012 233 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 ACOX1Q15067 660 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 LIPIQ6XZB0 460 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 TMEM184AQ6ZMB5 413 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 GK5Q6ZS86 529 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 VRK3Q8IV63 474 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 DEFB107AQ8IZN7 70 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 ARHGAP24Q8N264 748 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 BEND7Q8N7W2 519 aaPredicted RBP9.04□□□□□ -0.96
ATG4A-202ENST00000345734 TERB1Q8NA31 727 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 OR52B6Q8NGF0 335 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 OR56A4Q8NGH8 313 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 RP9Q8TA86 221 aaKnown RBP9.04□□□□□ -0.96
ATG4A-202ENST00000345734 PIP4K2CQ8TBX8 421 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 HCAR2Q8TDS4 363 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 RCN3Q96D15 328 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 ANKRD27Q96NW4 1050 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 PANX3Q96QZ0 392 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 ACOX2Q99424 681 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 RPP25Q9BUL9 199 aaKnown RBP9.04□□□□□ -0.96
ATG4A-202ENST00000345734 YIPF2Q9BWQ6 316 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 FAM126AQ9BYI3 521 aaPredicted RBP9.04□□□□□ -0.96
ATG4A-202ENST00000345734 TMEM245Q9H330 911 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 EBF2Q9HAK2 575 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 KCTD5Q9NXV2 234 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 SLC7A8Q9UHI5 535 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 ITGB1BP2Q9UKP3 347 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 WDR37Q9Y2I8 494 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 OARD1Q9Y530 152 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 ZFC3H1O60293 1989 aaKnown RBP9.04□□□□□ -0.96
ATG4A-202ENST00000345734 F5P12259 2224 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 H0Y3Z8 333 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 SLC22A2O15244 555 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 GPC4O75487 556 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 PDE5AO76074 875 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 PRNPP04156 253 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 S100BP04271 92 aaPredicted RBP9.04□□□□□ -0.96
ATG4A-202ENST00000345734 ALDOCP09972 364 aaKnown RBP9.04□□□□□ -0.96
ATG4A-202ENST00000345734 CCND1P24385 295 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 AOAHP28039 575 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 IL12RB1P42701 662 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 GDF5P43026 501 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 HSPA7P48741 367 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 ERFP50548 548 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 NUDT2P50583 147 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 SESN3P58005 492 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 ERVPABLB-1P60509 514 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 DLX2Q07687 328 aaPredicted RBP9.04□□□□□ -0.96
ATG4A-202ENST00000345734 HSPA14Q0VDF9 509 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 SQLEQ14534 574 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 E2F5Q15329 346 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 TTLL9Q3SXZ7 439 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 TCHHL1Q5QJ38 904 aaPredicted RBP9.04□□□□□ -0.96
ATG4A-202ENST00000345734 THEMIS2Q5TEJ8 643 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 ERAP2Q6P179 960 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 SCIMPQ6UWF3 145 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 PARM1Q6UWI2 310 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 GOLGA7Q7Z5G4 137 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 PHYKPLQ8IUZ5 450 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 KIRREL3Q8IZU9 778 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 CPA6Q8N4T0 437 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 TRAM1L1Q8N609 369 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 PDPRQ8NCN5 879 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 OR8D1Q8WZ84 308 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 FGF14Q92915 247 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 PPP2R3CQ969Q6 453 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 DCUN1D1Q96GG9 259 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 TSC22D3Q99576 134 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 EGFL8Q99944 293 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 GDF15Q99988 308 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 NOL11Q9H8H0 719 aaKnown RBP9.04□□□□□ -0.96
ATG4A-202ENST00000345734 SMOXQ9NWM0 555 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 POLG2Q9UHN1 485 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 PTBP2Q9UKA9 531 aaKnown RBP9.04□□□□□ -0.96
ATG4A-202ENST00000345734 GMEB1Q9Y692 573 aa9.04□□□□□ -0.96
ATG4A-202ENST00000345734 DENND4AQ7Z401 1863 aa9.03□□□□□ -0.96
ATG4A-202ENST00000345734 OR2AG2A6NM03 316 aa9.03□□□□□ -0.96
ATG4A-202ENST00000345734 OR7A17O14581 309 aa9.03□□□□□ -0.96
ATG4A-202ENST00000345734 OR4F21O95013 312 aa9.03□□□□□ -0.96
ATG4A-202ENST00000345734 ESRRBO95718 433 aa9.03□□□□□ -0.96
ATG4A-202ENST00000345734 MLYCDO95822 493 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms