RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 KLHL35Q6PF15 583 aa19.67■□□□□ 0.74
SPG7-202ENST00000341316 DHRS4L2Q6PKH6 230 aa19.67■□□□□ 0.74
SPG7-202ENST00000341316 RGL4Q8IZJ4 473 aa19.67■□□□□ 0.74
SPG7-202ENST00000341316 KLHL23Q8NBE8 558 aa19.67■□□□□ 0.74
SPG7-202ENST00000341316 PAPD5Q8NDF8 572 aaKnown RBP19.67■□□□□ 0.74
SPG7-202ENST00000341316 C12orf43Q96C57 262 aaKnown RBP19.67■□□□□ 0.74
SPG7-202ENST00000341316 MTFMTQ96DP5 389 aaKnown RBP19.67■□□□□ 0.74
SPG7-202ENST00000341316 ASAH2Q9NR71 780 aa19.67■□□□□ 0.74
SPG7-202ENST00000341316 DNAAF2Q9NVR5 837 aaKnown RBP19.67■□□□□ 0.74
SPG7-202ENST00000341316 PDE10AQ9Y233 779 aa19.67■□□□□ 0.74
SPG7-202ENST00000341316 DYTNA2CJ06 578 aa19.66■□□□□ 0.74
SPG7-202ENST00000341316 KRT87PA6NCN2 255 aa19.66■□□□□ 0.74
SPG7-202ENST00000341316 GRXCR2A6NFK2 248 aa19.66■□□□□ 0.74
SPG7-202ENST00000341316 NEDD8-MDP1E9PL57 170 aa19.66■□□□□ 0.74
SPG7-202ENST00000341316 MANBAO00462 879 aa19.66■□□□□ 0.74
SPG7-202ENST00000341316 RGS14O43566 566 aa19.66■□□□□ 0.74
SPG7-202ENST00000341316 ULK1O75385 1050 aa19.66■□□□□ 0.74
SPG7-202ENST00000341316 STK16O75716 305 aa19.66■□□□□ 0.74
SPG7-202ENST00000341316 EPB42P16452 691 aa19.66■□□□□ 0.74
SPG7-202ENST00000341316 MSH3P20585 1137 aa19.66■□□□□ 0.74
SPG7-202ENST00000341316 PTPN5P54829 565 aa19.66■□□□□ 0.74
SPG7-202ENST00000341316 CREMQ03060 361 aa19.66■□□□□ 0.74
SPG7-202ENST00000341316 CRY1Q16526 586 aa19.66■□□□□ 0.74
SPG7-202ENST00000341316 PYCR3Q53H96 274 aa19.66■□□□□ 0.74
SPG7-202ENST00000341316 SUSD1Q6UWL2 747 aa19.66■□□□□ 0.74
SPG7-202ENST00000341316 TRIM46Q7Z4K8 759 aa19.66■□□□□ 0.74
SPG7-202ENST00000341316 SPRED1Q7Z699 444 aa19.66■□□□□ 0.74
SPG7-202ENST00000341316 GPR180Q86V85 440 aa19.66■□□□□ 0.74
SPG7-202ENST00000341316 VRK3Q8IV63 474 aa19.66■□□□□ 0.74
SPG7-202ENST00000341316 GPR65Q8IYL9 337 aa19.66■□□□□ 0.74
SPG7-202ENST00000341316 GFM2Q969S9 779 aaKnown RBP19.66■□□□□ 0.74
SPG7-202ENST00000341316 CPEB1Q9BZB8 566 aaKnown RBP19.66■□□□□ 0.74
SPG7-202ENST00000341316 SAGE1Q9NXZ1 904 aa19.66■□□□□ 0.74
SPG7-202ENST00000341316 VAPAQ9P0L0 249 aa19.66■□□□□ 0.74
SPG7-202ENST00000341316 TRPS1Q9UHF7 1281 aa19.66■□□□□ 0.74
SPG7-202ENST00000341316 ANAPC2Q9UJX6 822 aa19.66■□□□□ 0.74
SPG7-202ENST00000341316 CDC14AQ9UNH5 594 aa19.66■□□□□ 0.74
SPG7-202ENST00000341316 KIAA0100Q14667 2235 aaKnown RBP19.66■□□□□ 0.74
SPG7-202ENST00000341316 IGLV3-16A0A075B6K0 115 aa19.65■□□□□ 0.74
SPG7-202ENST00000341316 MAGEB3O15480 346 aa19.65■□□□□ 0.74
SPG7-202ENST00000341316 DFNA5O60443 496 aa19.65■□□□□ 0.74
SPG7-202ENST00000341316 RASAL1O95294 804 aa19.65■□□□□ 0.74
SPG7-202ENST00000341316 EBLN1P0CF75 366 aa19.65■□□□□ 0.74
SPG7-202ENST00000341316 GGT5P36269 586 aa19.65■□□□□ 0.74
SPG7-202ENST00000341316 RPIAP49247 311 aa19.65■□□□□ 0.74
SPG7-202ENST00000341316 NUP107P57740 925 aa19.65■□□□□ 0.74
SPG7-202ENST00000341316 PWP1Q13610 501 aa19.65■□□□□ 0.74
SPG7-202ENST00000341316 CCDC149Q6ZUS6 474 aa19.65■□□□□ 0.74
SPG7-202ENST00000341316 LIX1Q8N485 282 aa19.65■□□□□ 0.74
SPG7-202ENST00000341316 DTWD1Q8N5C7 304 aa19.65■□□□□ 0.74
SPG7-202ENST00000341316 KRTCAP2Q8N6L1 136 aa19.65■□□□□ 0.74
SPG7-202ENST00000341316 SEPHS2Q99611 448 aa19.65■□□□□ 0.74
SPG7-202ENST00000341316 DCUN1D5Q9BTE7 237 aa19.65■□□□□ 0.74
SPG7-202ENST00000341316 ARL15Q9NXU5 204 aa19.65■□□□□ 0.74
SPG7-202ENST00000341316 FAF1Q9UNN5 650 aaPredicted RBP19.65■□□□□ 0.74
SPG7-202ENST00000341316 EI24O14681 340 aa19.65■□□□□ 0.74
SPG7-202ENST00000341316 GRM6O15303 877 aa19.65■□□□□ 0.74
SPG7-202ENST00000341316 MTX2O75431 263 aa19.65■□□□□ 0.74
SPG7-202ENST00000341316 POP4O95707 220 aaKnown RBP19.65■□□□□ 0.74
SPG7-202ENST00000341316 AOAHP28039 575 aa19.65■□□□□ 0.74
SPG7-202ENST00000341316 SPINT3P49223 89 aa19.65■□□□□ 0.74
SPG7-202ENST00000341316 HSPA14Q0VDF9 509 aa19.65■□□□□ 0.74
SPG7-202ENST00000341316 GLYATQ6IB77 296 aa19.65■□□□□ 0.74
SPG7-202ENST00000341316 OFCC1Q8IZS5 231 aa19.65■□□□□ 0.74
SPG7-202ENST00000341316 CHCHD4Q8N4Q1 142 aa19.65■□□□□ 0.74
SPG7-202ENST00000341316 ADAMTS16Q8TE57 1224 aa19.65■□□□□ 0.74
SPG7-202ENST00000341316 USP7Q93009 1102 aa19.65■□□□□ 0.74
SPG7-202ENST00000341316 NPLQ9BXD5 320 aaPredicted RBP19.65■□□□□ 0.74
SPG7-202ENST00000341316 LINC00597Q9H2U6 94 aa19.65■□□□□ 0.74
SPG7-202ENST00000341316 PCDHB3Q9Y5E6 796 aa19.65■□□□□ 0.74
SPG7-202ENST00000341316 TRIM64A6NGJ6 449 aa19.64■□□□□ 0.74
SPG7-202ENST00000341316 SLC28A1O00337 649 aa19.64■□□□□ 0.74
SPG7-202ENST00000341316 TIMP1P01033 207 aa19.64■□□□□ 0.74
SPG7-202ENST00000341316 CBSLP0DN79 551 aa19.64■□□□□ 0.74
SPG7-202ENST00000341316 CBSP35520 551 aa19.64■□□□□ 0.74
SPG7-202ENST00000341316 GNPDA1P46926 289 aa19.64■□□□□ 0.74
SPG7-202ENST00000341316 ENTPD1P49961 510 aa19.64■□□□□ 0.74
SPG7-202ENST00000341316 FAM174BQ3ZCQ3 159 aa19.64■□□□□ 0.74
SPG7-202ENST00000341316 SERPINA13PQ6UXR4 307 aa19.64■□□□□ 0.74
SPG7-202ENST00000341316 ELMOD1Q8N336 334 aa19.64■□□□□ 0.74
SPG7-202ENST00000341316 OSBPL6Q9BZF3 934 aa19.64■□□□□ 0.74
SPG7-202ENST00000341316 EIF3LQ9Y262 564 aaKnown RBP19.64■□□□□ 0.74
SPG7-202ENST00000341316 HIDE1A8MVS5 230 aa19.64■□□□□ 0.73
SPG7-202ENST00000341316 TMX2-CTNND1H3BSU7 103 aa19.64■□□□□ 0.73
SPG7-202ENST00000341316 CLOCKO15516 846 aa19.64■□□□□ 0.73
SPG7-202ENST00000341316 SEC22BO75396 215 aa19.64■□□□□ 0.73
SPG7-202ENST00000341316 MOSPD3O75425 235 aa19.64■□□□□ 0.73
SPG7-202ENST00000341316 ANXA5P08758 320 aa19.64■□□□□ 0.73
SPG7-202ENST00000341316 ERVFC1P60507 584 aa19.64■□□□□ 0.73
SPG7-202ENST00000341316 TEAD2Q15562 447 aa19.64■□□□□ 0.73
SPG7-202ENST00000341316 CPSF6Q16630 551 aaKnown RBP eCLIP19.64■□□□□ 0.73
SPG7-202ENST00000341316 AASDHQ4L235 1098 aaPredicted RBP19.64■□□□□ 0.73
SPG7-202ENST00000341316 SPANXN4Q5MJ08 99 aa19.64■□□□□ 0.73
SPG7-202ENST00000341316 TMTC4Q5T4D3 741 aa19.64■□□□□ 0.73
SPG7-202ENST00000341316 TMEM215Q68D42 235 aa19.64■□□□□ 0.73
SPG7-202ENST00000341316 RNF165Q6ZSG1 346 aa19.64■□□□□ 0.73
SPG7-202ENST00000341316 UBE2R2Q712K3 238 aaPredicted RBP19.64■□□□□ 0.73
SPG7-202ENST00000341316 OR2A12Q8NGT7 310 aa19.64■□□□□ 0.73
SPG7-202ENST00000341316 CLHC1Q8NHS4 586 aa19.64■□□□□ 0.73
SPG7-202ENST00000341316 SLC13A3Q8WWT9 602 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms