RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 HYAL1Q12794 435 aa15.97■□□□□ 0.15
LITAF-201ENST00000339430 RETSATQ6NUM9 610 aa15.97■□□□□ 0.15
LITAF-201ENST00000339430 DNAJC14Q6Y2X3 702 aaPredicted RBP15.97■□□□□ 0.15
LITAF-201ENST00000339430 TBC1D21Q8IYX1 336 aa15.97■□□□□ 0.15
LITAF-201ENST00000339430 CGREF1Q99674 301 aa15.97■□□□□ 0.15
LITAF-201ENST00000339430 ZNF576Q9H609 170 aa15.97■□□□□ 0.15
LITAF-201ENST00000339430 HELZP42694 1942 aaKnown RBP15.97■□□□□ 0.15
LITAF-201ENST00000339430 C5orf42Q9H799 3197 aa15.97■□□□□ 0.15
LITAF-201ENST00000339430 GFRA2O00451 464 aa15.97■□□□□ 0.15
LITAF-201ENST00000339430 CLOCKO15516 846 aa15.97■□□□□ 0.15
LITAF-201ENST00000339430 DFNA5O60443 496 aa15.97■□□□□ 0.15
LITAF-201ENST00000339430 SNAP29O95721 258 aa15.97■□□□□ 0.15
LITAF-201ENST00000339430 RPS3P23396 243 aaKnown RBP eCLIP15.97■□□□□ 0.154e-7■■■□□ 16.1
LITAF-201ENST00000339430 NFKBIAP25963 317 aa15.97■□□□□ 0.15
LITAF-201ENST00000339430 VARSP26640 1264 aaKnown RBP15.97■□□□□ 0.15
LITAF-201ENST00000339430 ALDH3B2P48448 385 aa15.97■□□□□ 0.15
LITAF-201ENST00000339430 LMAN2Q12907 356 aa15.97■□□□□ 0.15
LITAF-201ENST00000339430 OTUD3Q5T2D3 398 aaPredicted RBP15.97■□□□□ 0.15
LITAF-201ENST00000339430 TMEM214Q6NUQ4 689 aaKnown RBP15.97■□□□□ 0.15
LITAF-201ENST00000339430 BORAQ6PGQ7 559 aa15.97■□□□□ 0.15
LITAF-201ENST00000339430 PROSER1Q86XN7 944 aa15.97■□□□□ 0.15
LITAF-201ENST00000339430 DPP10Q8N608 796 aa15.97■□□□□ 0.15
LITAF-201ENST00000339430 VAPAQ9P0L0 249 aa15.97■□□□□ 0.15
LITAF-201ENST00000339430 ZNHIT2Q9UHR6 403 aa15.97■□□□□ 0.15
LITAF-201ENST00000339430 CCL27Q9Y4X3 112 aa15.97■□□□□ 0.15
LITAF-201ENST00000339430 FADS3Q9Y5Q0 445 aa15.97■□□□□ 0.15
LITAF-201ENST00000339430 NPIPB15A6NHN6 443 aaPredicted RBP15.96■□□□□ 0.15
LITAF-201ENST00000339430 SOBPA7XYQ1 873 aa15.96■□□□□ 0.15
LITAF-201ENST00000339430 ASLP04424 464 aa15.96■□□□□ 0.15
LITAF-201ENST00000339430 UMPSP11172 480 aa15.96■□□□□ 0.15
LITAF-201ENST00000339430 CD70P32970 193 aa15.96■□□□□ 0.15
LITAF-201ENST00000339430 STK19P49842 368 aaPredicted RBP15.96■□□□□ 0.15
LITAF-201ENST00000339430 CDKN3Q16667 212 aa15.96■□□□□ 0.15
LITAF-201ENST00000339430 DGKKQ5KSL6 1271 aa15.96■□□□□ 0.15
LITAF-201ENST00000339430 LPCAT2Q7L5N7 544 aa15.96■□□□□ 0.15
LITAF-201ENST00000339430 PAPD5Q8NDF8 572 aaKnown RBP15.96■□□□□ 0.15
LITAF-201ENST00000339430 CLHC1Q8NHS4 586 aa15.96■□□□□ 0.15
LITAF-201ENST00000339430 HM13Q8TCT9 377 aa15.96■□□□□ 0.15
LITAF-201ENST00000339430 CD244Q9BZW8 370 aa15.96■□□□□ 0.15
LITAF-201ENST00000339430 DZANK1Q9NVP4 752 aa15.96■□□□□ 0.15
LITAF-201ENST00000339430 RSL24D1Q9UHA3 163 aaKnown RBP15.96■□□□□ 0.15
LITAF-201ENST00000339430 ZNF490Q9ULM2 529 aaPredicted RBP15.96■□□□□ 0.15
LITAF-201ENST00000339430 NEUROG3Q9Y4Z2 214 aa15.96■□□□□ 0.15
LITAF-201ENST00000339430 ZNF106Q9H2Y7 1883 aaKnown RBP15.96■□□□□ 0.15
LITAF-201ENST00000339430 C2orf16Q68DN1 1984 aa15.96■□□□□ 0.14
LITAF-201ENST00000339430 LOC730098B7Z3J9 87 aa15.95■□□□□ 0.14
LITAF-201ENST00000339430 CTSOP43234 321 aaPredicted RBP15.95■□□□□ 0.14
LITAF-201ENST00000339430 RPS9P46781 194 aaKnown RBP15.95■□□□□ 0.14
LITAF-201ENST00000339430 SH3BGRP55822 239 aaPredicted RBP15.95■□□□□ 0.14
LITAF-201ENST00000339430 PWP1Q13610 501 aa15.95■□□□□ 0.14
LITAF-201ENST00000339430 ARHGEF7Q14155 803 aa15.95■□□□□ 0.14
LITAF-201ENST00000339430 FAM174BQ3ZCQ3 159 aa15.95■□□□□ 0.14
LITAF-201ENST00000339430 GPRC6AQ5T6X5 926 aa15.95■□□□□ 0.14
LITAF-201ENST00000339430 CPXM2Q8N436 756 aa15.95■□□□□ 0.14
LITAF-201ENST00000339430 KRTCAP2Q8N6L1 136 aa15.95■□□□□ 0.14
LITAF-201ENST00000339430 GPR26Q8NDV2 337 aa15.95■□□□□ 0.14
LITAF-201ENST00000339430 RHBDF1Q96CC6 855 aa15.95■□□□□ 0.14
LITAF-201ENST00000339430 PRO3102Q9H379 93 aa15.95■□□□□ 0.14
LITAF-201ENST00000339430 SMPD3Q9NY59 655 aaPredicted RBP15.95■□□□□ 0.14
LITAF-201ENST00000339430 PCDHB3Q9Y5E6 796 aa15.95■□□□□ 0.14
LITAF-201ENST00000339430 KANSL1LA0AUZ9 987 aa15.95■□□□□ 0.14
LITAF-201ENST00000339430 RGS14O43566 566 aa15.95■□□□□ 0.14
LITAF-201ENST00000339430 ZNF821O75541 412 aaPredicted RBP15.95■□□□□ 0.14
LITAF-201ENST00000339430 KCNH1O95259 989 aa15.95■□□□□ 0.14
LITAF-201ENST00000339430 NPPAP01160 153 aa15.95■□□□□ 0.14
LITAF-201ENST00000339430 CHRM1P11229 460 aaPredicted RBP15.95■□□□□ 0.14
LITAF-201ENST00000339430 SPAM1P38567 509 aa15.95■□□□□ 0.14
LITAF-201ENST00000339430 PLCL1Q15111 1095 aa15.95■□□□□ 0.14
LITAF-201ENST00000339430 IMPG1Q17R60 797 aa15.95■□□□□ 0.14
LITAF-201ENST00000339430 ZIK1Q3SY52 487 aaPredicted RBP15.95■□□□□ 0.14
LITAF-201ENST00000339430 SLC44A4Q53GD3 710 aa15.95■□□□□ 0.14
LITAF-201ENST00000339430 LRRC73Q5JTD7 316 aa15.95■□□□□ 0.14
LITAF-201ENST00000339430 RFLNAQ6ZTI6 216 aa15.95■□□□□ 0.14
LITAF-201ENST00000339430 LIX1Q8N485 282 aa15.95■□□□□ 0.14
LITAF-201ENST00000339430 DHRSXQ8N5I4 330 aa15.95■□□□□ 0.14
LITAF-201ENST00000339430 FIG4Q92562 907 aa15.95■□□□□ 0.14
LITAF-201ENST00000339430 PPP3R2Q96LZ3 170 aa15.95■□□□□ 0.14
LITAF-201ENST00000339430 ATP13A3Q9H7F0 1226 aa15.95■□□□□ 0.14
LITAF-201ENST00000339430 THEGQ9P2T0 379 aa15.95■□□□□ 0.14
LITAF-201ENST00000339430 MAGEL2Q9UJ55 1249 aa15.95■□□□□ 0.14
LITAF-201ENST00000339430 HEMK1Q9Y5R4 338 aaPredicted RBP15.95■□□□□ 0.14
LITAF-201ENST00000339430 MAGED1Q9Y5V3 778 aaPredicted RBP15.95■□□□□ 0.14
LITAF-201ENST00000339430 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.94■□□□□ 0.14
LITAF-201ENST00000339430 ARNTLO00327 626 aa15.94■□□□□ 0.14
LITAF-201ENST00000339430 SEC22BO75396 215 aa15.94■□□□□ 0.14
LITAF-201ENST00000339430 PAPLNO95428 1278 aa15.94■□□□□ 0.14
LITAF-201ENST00000339430 JAK1P23458 1154 aa15.94■□□□□ 0.14
LITAF-201ENST00000339430 KIAA0040Q15053 153 aa15.94■□□□□ 0.14
LITAF-201ENST00000339430 CYBRD1Q53TN4 286 aa15.94■□□□□ 0.14
LITAF-201ENST00000339430 FAM86B1Q8N7N1 296 aa15.94■□□□□ 0.14
LITAF-201ENST00000339430 SLC13A3Q8WWT9 602 aa15.94■□□□□ 0.14
LITAF-201ENST00000339430 ULK4Q96C45 1275 aa15.94■□□□□ 0.14
LITAF-201ENST00000339430 PHF12Q96QT6 1004 aa15.94■□□□□ 0.14
LITAF-201ENST00000339430 THUMPD3Q9BV44 507 aaKnown RBP15.94■□□□□ 0.14
LITAF-201ENST00000339430 IKZF5Q9H5V7 419 aa15.94■□□□□ 0.14
LITAF-201ENST00000339430 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.94■□□□□ 0.14
LITAF-201ENST00000339430 EIF3LQ9Y262 564 aaKnown RBP15.94■□□□□ 0.14
LITAF-201ENST00000339430 PRRC2BQ5JSZ5 2229 aaKnown RBP15.94■□□□□ 0.14
LITAF-201ENST00000339430 TRBV5-4A0A0C4DH59 114 aa15.94■□□□□ 0.14
LITAF-201ENST00000339430 K7EPI3 171 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms