RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 PEG10Q86TG7 708 aaKnown RBP13.5□□□□□ -0.25
RTN4-202ENST00000337526 GKN1Q9NS71 199 aa13.5□□□□□ -0.25
RTN4-202ENST00000337526 ZNF282Q9UDV7 671 aaPredicted RBP13.5□□□□□ -0.25
RTN4-202ENST00000337526 CYP11A1P05108 521 aa13.5□□□□□ -0.25
RTN4-202ENST00000337526 PRKCGP05129 697 aa13.5□□□□□ -0.25
RTN4-202ENST00000337526 IDSP22304 550 aa13.5□□□□□ -0.25
RTN4-202ENST00000337526 TIE1P35590 1138 aa13.5□□□□□ -0.25
RTN4-202ENST00000337526 NFKB2Q00653 900 aa13.5□□□□□ -0.25
RTN4-202ENST00000337526 RABL3Q5HYI8 236 aa13.5□□□□□ -0.25
RTN4-202ENST00000337526 CXorf57Q6NSI4 855 aaKnown RBP13.5□□□□□ -0.25
RTN4-202ENST00000337526 ZNF433Q8N7K0 673 aaPredicted RBP13.5□□□□□ -0.25
RTN4-202ENST00000337526 CNPPD1Q9BV87 410 aa13.5□□□□□ -0.25
RTN4-202ENST00000337526 C11orf16Q9NQ32 467 aa13.5□□□□□ -0.25
RTN4-202ENST00000337526 HS3ST4Q9Y661 456 aa13.5□□□□□ -0.25
RTN4-202ENST00000337526 FAM208AQ9UK61 1670 aaKnown RBP13.5□□□□□ -0.25
RTN4-202ENST00000337526 RBM48Q5RL73 367 aaKnown RBP13.5□□□□□ -0.25
RTN4-202ENST00000337526 C1orf220Q5T0J3 134 aa13.5□□□□□ -0.25
RTN4-202ENST00000337526 SLC2A7Q6PXP3 512 aa13.5□□□□□ -0.25
RTN4-202ENST00000337526 TAS1R3Q7RTX0 852 aa13.5□□□□□ -0.25
RTN4-202ENST00000337526 TRPV1Q8NER1 839 aa13.5□□□□□ -0.25
RTN4-202ENST00000337526 ACDQ96AP0 544 aa13.5□□□□□ -0.25
RTN4-202ENST00000337526 DEFB118Q96PH6 123 aa13.5□□□□□ -0.25
RTN4-202ENST00000337526 CITED4Q96RK1 184 aa13.5□□□□□ -0.25
RTN4-202ENST00000337526 BRINP2Q9C0B6 783 aa13.5□□□□□ -0.25
RTN4-202ENST00000337526 SP140LQ9H930 580 aa13.5□□□□□ -0.25
RTN4-202ENST00000337526 AKAP7Q9P0M2 348 aaPredicted RBP13.5□□□□□ -0.25
RTN4-202ENST00000337526 FNIP2Q9P278 1114 aa13.5□□□□□ -0.25
RTN4-202ENST00000337526 ALDOAP04075 364 aaKnown RBP13.49□□□□□ -0.25
RTN4-202ENST00000337526 CD247P20963 164 aa13.49□□□□□ -0.25
RTN4-202ENST00000337526 ACVRL1P37023 503 aa13.49□□□□□ -0.25
RTN4-202ENST00000337526 UFM1P61960 85 aa13.49□□□□□ -0.25
RTN4-202ENST00000337526 ADGRF1Q5T601 910 aa13.49□□□□□ -0.25
RTN4-202ENST00000337526 SPRYD7Q5W111 196 aa13.49□□□□□ -0.25
RTN4-202ENST00000337526 BEND5Q7L4P6 421 aa13.49□□□□□ -0.25
RTN4-202ENST00000337526 CTU1Q7Z7A3 348 aaKnown RBP13.49□□□□□ -0.25
RTN4-202ENST00000337526 OSTM1Q86WC4 334 aa13.49□□□□□ -0.25
RTN4-202ENST00000337526 ZNF347Q96SE7 839 aa13.49□□□□□ -0.25
RTN4-202ENST00000337526 POLR2J2Q9GZM3 115 aaKnown RBP13.49□□□□□ -0.25
RTN4-202ENST00000337526 TMEM27Q9HBJ8 222 aa13.49□□□□□ -0.25
RTN4-202ENST00000337526 SLC22A1O15245 554 aa13.49□□□□□ -0.25
RTN4-202ENST00000337526 OR1F1O43749 312 aa13.49□□□□□ -0.25
RTN4-202ENST00000337526 TPST2O60704 377 aa13.49□□□□□ -0.25
RTN4-202ENST00000337526 KCNE1P15382 129 aa13.49□□□□□ -0.25
RTN4-202ENST00000337526 DSC3Q14574 896 aa13.49□□□□□ -0.25
RTN4-202ENST00000337526 SUZ12Q15022 739 aaKnown RBP13.49□□□□□ -0.25
RTN4-202ENST00000337526 NPAS4Q8IUM7 802 aa13.49□□□□□ -0.25
RTN4-202ENST00000337526 IPCEF1Q8WWN9 437 aaPredicted RBP13.49□□□□□ -0.25
RTN4-202ENST00000337526 SLC7A6OSQ96CW6 309 aaPredicted RBP13.49□□□□□ -0.25
RTN4-202ENST00000337526 TMEM74Q96NL1 305 aa13.49□□□□□ -0.25
RTN4-202ENST00000337526 SMOQ99835 787 aa13.49□□□□□ -0.25
RTN4-202ENST00000337526 TVP23BQ9NYZ1 205 aa13.49□□□□□ -0.25
RTN4-202ENST00000337526 KCTD3Q9Y597 815 aa13.49□□□□□ -0.25
RTN4-202ENST00000337526 COL14A1Q05707 1796 aaKnown RBP13.49□□□□□ -0.25
RTN4-202ENST00000337526 URB1O60287 2271 aaKnown RBP13.49□□□□□ -0.25
RTN4-202ENST00000337526 RBM47A0AV96 593 aaKnown RBP13.49□□□□□ -0.25
RTN4-202ENST00000337526 PI15O43692 258 aa13.49□□□□□ -0.25
RTN4-202ENST00000337526 HCN1O60741 890 aa13.49□□□□□ -0.25
RTN4-202ENST00000337526 ZBTB48P10074 688 aaPredicted RBP13.49□□□□□ -0.25
RTN4-202ENST00000337526 KELP23276 732 aa13.49□□□□□ -0.25
RTN4-202ENST00000337526 ITPKBP27987 946 aa13.49□□□□□ -0.25
RTN4-202ENST00000337526 MYBPC1Q00872 1141 aa13.49□□□□□ -0.25
RTN4-202ENST00000337526 ZNF33AQ06730 810 aa13.49□□□□□ -0.25
RTN4-202ENST00000337526 FOXM1Q08050 763 aa13.49□□□□□ -0.25
RTN4-202ENST00000337526 RAPSNQ13702 412 aa13.49□□□□□ -0.25
RTN4-202ENST00000337526 SH3D19Q5HYK7 790 aa13.49□□□□□ -0.25
RTN4-202ENST00000337526 PLPP4Q5VZY2 271 aa13.49□□□□□ -0.25
RTN4-202ENST00000337526 FAM171BQ6P995 826 aa13.49□□□□□ -0.25
RTN4-202ENST00000337526 RBM23Q86U06 439 aaKnown RBP13.49□□□□□ -0.25
RTN4-202ENST00000337526 RFKQ969G6 155 aa13.49□□□□□ -0.25
RTN4-202ENST00000337526 POLR2J3Q9H1A7 115 aaKnown RBP13.49□□□□□ -0.25
RTN4-202ENST00000337526 MTRRQ9UBK8 725 aa13.49□□□□□ -0.25
RTN4-202ENST00000337526 VPS29Q9UBQ0 182 aa13.49□□□□□ -0.25
RTN4-202ENST00000337526 LRRC14BA6NHZ5 514 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 HAS3O00219 553 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 ZNF24P17028 368 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 IVDP26440 423 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 CASP9P55211 416 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 TIGD6Q17RP2 521 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 RNASE12Q5GAN4 147 aaKnown RBP13.48□□□□□ -0.25
RTN4-202ENST00000337526 LRRC73Q5JTD7 316 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.48□□□□□ -0.25
RTN4-202ENST00000337526 CLDN19Q8N6F1 224 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 STON2Q8WXE9 905 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 DNASE1L2Q92874 299 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 MBD2Q9UBB5 411 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 ILVBLA1L0T0 632 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 H3BNH8 94 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 DNTTP04053 509 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 GMFBP60983 142 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 PLEKHG6Q3KR16 790 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 TNFAIP8L2Q6P589 184 aaPredicted RBP13.48□□□□□ -0.25
RTN4-202ENST00000337526 OAFQ86UD1 273 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 CILP2Q8IUL8 1156 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 RGL4Q8IZJ4 473 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 GJD3Q8N144 294 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 UBE2J2Q8N2K1 259 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 ZMIZ2Q8NF64 920 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 DENND1AQ8TEH3 1009 aa13.48□□□□□ -0.25
RTN4-202ENST00000337526 LIN28AQ9H9Z2 209 aaKnown RBP13.48□□□□□ -0.25
RTN4-202ENST00000337526 MYH8P13535 1937 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms