RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 CLCQ05315 142 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 PLA2G4EQ3MJ16 856 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 ADNP2Q6IQ32 1131 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 RABEPKQ7Z6M1 372 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 GDAP2Q9NXN4 497 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 TAS2R14Q9NYV8 317 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 SUSD2Q9UGT4 822 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 C10orf71Q711Q0 1435 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 GJB6O95452 261 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 ACVR2AP27037 513 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 EPHA3P29320 983 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 RPS21P63220 83 aaKnown RBP12.05□□□□□ -0.48
FN1-202ENST00000336916 RAPSNQ13702 412 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 SWI5Q1ZZU3 235 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 CHRDL2Q6WN34 429 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 ILDR1Q86SU0 546 aaPredicted RBP12.05□□□□□ -0.48
FN1-202ENST00000336916 CAND1Q86VP6 1230 aaKnown RBP12.05□□□□□ -0.48
FN1-202ENST00000336916 PQLC1Q8N2U9 271 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 KBTBD7Q8WVZ9 684 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 TESCQ96BS2 214 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 C12orf66Q96MD2 445 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 FCRL4Q96PJ5 515 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 TBC1D10AQ9BXI6 508 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 LDAHQ9H6V9 325 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 TMPRSS11EQ9UL52 423 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 COL2A1P02458 1487 aaPredicted RBP12.05□□□□□ -0.48
FN1-202ENST00000336916 HMGN1P05114 100 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 HERVK_113P63132 956 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 TSTD2Q5T7W7 516 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 ADGRD1Q6QNK2 874 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.05□□□□□ -0.48
FN1-202ENST00000336916 CMTM7Q96FZ5 175 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 ERVK-6Q9BXR3 956 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 SMOC2Q9H3U7 446 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 AK5Q9Y6K8 562 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 PSMD11O00231 422 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 B4GALT5O43286 388 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 APBB3O95704 486 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 DNAJA1P31689 397 aaKnown RBP12.05□□□□□ -0.48
FN1-202ENST00000336916 JAM2P57087 298 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 SP140Q13342 867 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 ZNF641Q96N77 438 aaPredicted RBP12.05□□□□□ -0.48
FN1-202ENST00000336916 GPR21Q99679 349 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 RABL2AQ9UBK7 228 aaPredicted RBP12.05□□□□□ -0.48
FN1-202ENST00000336916 RABL2BQ9UNT1 228 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 BTN3A3O00478 584 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 SLC31A1O15431 190 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 BRCC3P46736 316 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 RTL10Q7L3V2 364 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 TMCO2Q7Z6W1 182 aaPredicted RBP12.05□□□□□ -0.48
FN1-202ENST00000336916 ARL10Q8N8L6 244 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 CCDC107Q8WV48 283 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 GEMIN6Q8WXD5 167 aaKnown RBP12.05□□□□□ -0.48
FN1-202ENST00000336916 DPYSL5Q9BPU6 564 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 LPIN3Q9BQK8 851 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 BCO2Q9BYV7 579 aa12.05□□□□□ -0.48
FN1-202ENST00000336916 DDX3YO15523 660 aaKnown RBP12.04□□□□□ -0.48
FN1-202ENST00000336916 EPOP01588 193 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 CFIP05156 583 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 HNRNPLP14866 589 aaKnown RBP eCLIP12.04□□□□□ -0.485e-8■■□□□ 12.5
FN1-202ENST00000336916 PTPN5P54829 565 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 ZNF483Q8TF39 744 aaPredicted RBP12.04□□□□□ -0.48
FN1-202ENST00000336916 PTGES2Q9H7Z7 377 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 C2CD4BA6NLJ0 364 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 TGFB1I1O43294 461 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 CD63P08962 238 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 SRP54P61011 504 aaKnown RBP12.04□□□□□ -0.48
FN1-202ENST00000336916 TAF5Q15542 800 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 SLC34A3Q8N130 599 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 ARL8BQ9NVJ2 186 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 FBXL12Q9NXK8 326 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 COMMD3-BMI1R4GMX3 469 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 MFSD11O43934 449 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 FAM153BP0C7A2 387 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 DGKEP52429 567 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 FOXM1Q08050 763 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 PDK3Q15120 406 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 MNTQ99583 582 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 NDRG2Q9UN36 371 aaKnown RBP12.04□□□□□ -0.48
FN1-202ENST00000336916 HCN1O60741 890 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 ANPEPP15144 967 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 ITPKAP23677 461 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 SGCBQ16585 318 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 SLC30A6Q6NXT4 461 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 THAP5Q7Z6K1 395 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 CRYBG2Q8N1P7 616 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 CD320Q9NPF0 282 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 KCNJ13O60928 360 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 ZSCAN5DPP0CG00 497 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 CPN2P22792 545 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 CHIT1Q13231 466 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 SH3D19Q5HYK7 790 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 SEMA6AQ9H2E6 1030 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 PAK6Q9NQU5 681 aaPredicted RBP12.04□□□□□ -0.48
FN1-202ENST00000336916 BTRCQ9Y297 605 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 ANXA2P2A6NMY6 339 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 AGPSO00116 658 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 FFAR2O15552 330 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 CCNB2O95067 398 aa12.04□□□□□ -0.48
FN1-202ENST00000336916 ANXA2P07355 339 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms