RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 ARIH1Q9Y4X5 557 aaPredicted RBP8.07□□□□□ -1.12
HPS4-201ENST00000336873 ANKDD1BA6NHY2 528 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 CXCR6O00574 342 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 STC2O76061 302 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 OR56A5P0C7T3 313 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 ALOX12P18054 663 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 CTGFP29279 349 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 CTSOP43234 321 aaPredicted RBP8.06□□□□□ -1.12
HPS4-201ENST00000336873 NFKB2Q00653 900 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 DNASE1L3Q13609 305 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 TAF1AQ15573 450 aaPredicted RBP8.06□□□□□ -1.12
HPS4-201ENST00000336873 LRRC66Q68CR7 880 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 CES5AQ6NT32 575 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 TTC23LQ6PF05 361 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 PAGE2Q7Z2X7 111 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 EFL1Q7Z2Z2 1120 aaKnown RBP8.06□□□□□ -1.12
HPS4-201ENST00000336873 CFAP206Q8IYR0 622 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 TBC1D21Q8IYX1 336 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 TMEM132CQ8N3T6 1108 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 DTWD1Q8N5C7 304 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 ZBTB2Q8N680 514 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 PIK3C3Q8NEB9 887 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 OR2T11Q8NH01 316 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 NSMCE3Q96MG7 304 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 LRRC3Q9BY71 257 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 MEAF6Q9HAF1 191 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 SUCOQ9UBS9 1254 aaKnown RBP8.06□□□□□ -1.12
HPS4-201ENST00000336873 GNPTGQ9UJJ9 305 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 LCHNA4D1U4 455 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 INPPL1O15357 1258 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 ERAL1O75616 437 aaKnown RBP8.06□□□□□ -1.12
HPS4-201ENST00000336873 RFPL2O75678 378 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 SERPINI2O75830 405 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 ANGPTL1O95841 491 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 FAM163BP0C2L3 166 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 ATXN1LP0C7T5 689 aaKnown RBP8.06□□□□□ -1.12
HPS4-201ENST00000336873 FCGR1AP12314 374 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 HLA-EP13747 358 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 SELPP16109 830 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 CDH2P19022 906 aaPredicted RBP8.06□□□□□ -1.12
HPS4-201ENST00000336873 AZGP1P25311 298 aaKnown RBP8.06□□□□□ -1.12
HPS4-201ENST00000336873 MAP2K4P45985 399 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 RNF144AP50876 292 aaPredicted RBP8.06□□□□□ -1.12
HPS4-201ENST00000336873 INHBCP55103 352 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 ALDH6A1Q02252 535 aaKnown RBP8.06□□□□□ -1.12
HPS4-201ENST00000336873 MORN1Q5T089 497 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 EGFLAMQ63HQ2 1017 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 PRMT9Q6P2P2 845 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 SLCO6A1Q86UG4 719 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 LSRQ86X29 649 aaPredicted RBP8.06□□□□□ -1.12
HPS4-201ENST00000336873 CCDC103Q8IW40 242 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 VPS37AQ8NEZ2 397 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 TNIP2Q8NFZ5 429 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 WFDC5Q8TCV5 224 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 UROC1Q96N76 676 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 TFB2MQ9H5Q4 396 aaKnown RBP8.06□□□□□ -1.12
HPS4-201ENST00000336873 RMND5AQ9H871 391 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 DYRK4Q9NR20 520 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 PLAGL1Q9UM63 463 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 TBC1D30Q9Y2I9 924 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 PRSS21Q9Y6M0 314 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 SPTBN2O15020 2390 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 WDFY3Q8IZQ1 3526 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 ZNF487B1APH4 448 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 NDUFB5O43674 189 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 EPN2O95208 641 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 APOL3O95236 402 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 DDX5P17844 614 aaKnown RBP8.06□□□□□ -1.12
HPS4-201ENST00000336873 GPX3P22352 226 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 TRPC1P48995 793 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 VBP1P61758 197 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 MXD1Q05195 221 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 BNIP2Q12982 314 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 KCNAB2Q13303 367 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 GPR17Q13304 367 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 MED22Q15528 200 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 NHSL2Q5HYW2 709 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 BROXQ5VW32 411 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 TBPL2Q6SJ96 375 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 ITIH5Q86UX2 942 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 HIPK1Q86Z02 1210 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 HID1Q8IV36 788 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 ZDHHC21Q8IVQ6 265 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 AHI1Q8N157 1196 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 STX19Q8N4C7 294 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 ZFYVE19Q96K21 471 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 PPP3R2Q96LZ3 170 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 PRICKLE1Q96MT3 831 aaPredicted RBP8.06□□□□□ -1.12
HPS4-201ENST00000336873 ASB2Q96Q27 587 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 PSKH2Q96QS6 385 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 TSEN34Q9BSV6 310 aaKnown RBP8.06□□□□□ -1.12
HPS4-201ENST00000336873 REXO4Q9GZR2 422 aaKnown RBP8.06□□□□□ -1.12
HPS4-201ENST00000336873 REEP1Q9H902 201 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 PTTG2Q9NZH5 202 aa8.06□□□□□ -1.12
HPS4-201ENST00000336873 RABL2AQ9UBK7 228 aaPredicted RBP8.06□□□□□ -1.12
HPS4-201ENST00000336873 FBXO9Q9UK97 447 aaPredicted RBP8.06□□□□□ -1.12
HPS4-201ENST00000336873 TNPO3Q9Y5L0 923 aaKnown RBP8.06□□□□□ -1.12
HPS4-201ENST00000336873 OR6C75A6NL08 312 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 ACOT8O14734 319 aa8.05□□□□□ -1.12
HPS4-201ENST00000336873 TFECO14948 347 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms