RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 FAM129BQ96TA1 746 aa15.55■□□□□ 0.08
PDGFB-201ENST00000331163 CEP44Q9C0F1 390 aa15.55■□□□□ 0.08
PDGFB-201ENST00000331163 PHPT1Q9NRX4 125 aaPredicted RBP15.55■□□□□ 0.08
PDGFB-201ENST00000331163 OXSMQ9NWU1 459 aa15.55■□□□□ 0.08
PDGFB-201ENST00000331163 KCTD5Q9NXV2 234 aa15.55■□□□□ 0.08
PDGFB-201ENST00000331163 PCDHGB4Q9UN71 923 aa15.55■□□□□ 0.08
PDGFB-201ENST00000331163 KLHL20Q9Y2M5 609 aa15.55■□□□□ 0.08
PDGFB-201ENST00000331163 PCDHGB5Q9Y5G0 923 aa15.55■□□□□ 0.08
PDGFB-201ENST00000331163 HTRA2O43464 458 aaPredicted RBP15.54■□□□□ 0.08
PDGFB-201ENST00000331163 UQCRBP14927 111 aa15.54■□□□□ 0.08
PDGFB-201ENST00000331163 CYP2A7P20853 494 aa15.54■□□□□ 0.08
PDGFB-201ENST00000331163 ETV4P43268 484 aa15.54■□□□□ 0.08
PDGFB-201ENST00000331163 GK3PQ14409 553 aa15.54■□□□□ 0.08
PDGFB-201ENST00000331163 RNF175Q8N4F7 328 aa15.54■□□□□ 0.08
PDGFB-201ENST00000331163 CD200R1Q8TD46 325 aa15.54■□□□□ 0.08
PDGFB-201ENST00000331163 CACNA1GO43497 2377 aa15.54■□□□□ 0.08
PDGFB-201ENST00000331163 H0Y858 1186 aa15.54■□□□□ 0.08
PDGFB-201ENST00000331163 FTH1P02794 183 aa15.54■□□□□ 0.08
PDGFB-201ENST00000331163 CAPN1P07384 714 aa15.54■□□□□ 0.08
PDGFB-201ENST00000331163 HGFP14210 728 aa15.54■□□□□ 0.08
PDGFB-201ENST00000331163 CD1DP15813 335 aa15.54■□□□□ 0.08
PDGFB-201ENST00000331163 FCARP24071 287 aa15.54■□□□□ 0.08
PDGFB-201ENST00000331163 KRT72Q14CN4 511 aa15.54■□□□□ 0.08
PDGFB-201ENST00000331163 XKR6Q5GH73 641 aa15.54■□□□□ 0.08
PDGFB-201ENST00000331163 ADAMTSL2Q86TH1 951 aa15.54■□□□□ 0.08
PDGFB-201ENST00000331163 AMZ2Q86W34 360 aa15.54■□□□□ 0.08
PDGFB-201ENST00000331163 ELSPBP1Q96BH3 223 aa15.54■□□□□ 0.08
PDGFB-201ENST00000331163 FAM210AQ96ND0 272 aa15.54■□□□□ 0.08
PDGFB-201ENST00000331163 MRPL1Q9BYD6 325 aaKnown RBP15.54■□□□□ 0.08
PDGFB-201ENST00000331163 DNAJC28Q9NX36 388 aa15.54■□□□□ 0.08
PDGFB-201ENST00000331163 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 POM121BA6NF01 834 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 SEC22BO75396 215 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 COPAP53621 1224 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 CAMK2GQ13555 558 aaPredicted RBP15.53■□□□□ 0.08
PDGFB-201ENST00000331163 SLC22A9Q8IVM8 553 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 ETFBKMTQ8IXQ9 262 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 TMEFF1Q8IYR6 380 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 AADATQ8N5Z0 425 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 RASGEF1AQ8N9B8 481 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 OR9I1Q8NGQ6 314 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 ZSCAN5AQ9BUG6 496 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 FETUBQ9UGM5 382 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 IKZF3Q9UKT9 509 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 PCDHB1Q9Y5F3 818 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 FRMPD3Q5JV73 1810 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 UNC13CQ8NB66 2214 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 MAGEC1O60732 1142 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 C1QAP02745 245 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 EPB42P16452 691 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 CHN2P52757 468 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 XIAPP98170 497 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 TDGQ13569 410 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 GPR33Q49SQ1 333 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 SNX32Q86XE0 403 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 MIER2Q8N344 545 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 MAPK15Q8TD08 544 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 SELENOMQ8WWX9 145 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 SLC17A9Q9BYT1 436 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 TRIM8Q9BZR9 551 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 POLMQ9NP87 494 aaPredicted RBP15.53■□□□□ 0.08
PDGFB-201ENST00000331163 IGSF5Q9NSI5 407 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 G3V2L1 256 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 MBTPS2O43462 519 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 ADARP55265 1226 aaKnown RBP15.53■□□□□ 0.08
PDGFB-201ENST00000331163 FOXA1P55317 472 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 PKNOX1P55347 436 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 MRPS22P82650 360 aaKnown RBP15.53■□□□□ 0.08
PDGFB-201ENST00000331163 PTCHD3Q3KNS1 767 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 CCSMST1Q4G0I0 132 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 KCTD21Q4G0X4 260 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 GALNT13Q8IUC8 556 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 BTN2A2Q8WVV5 523 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 BIRC8Q96P09 236 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 PHF7Q9BWX1 381 aaPredicted RBP15.53■□□□□ 0.08
PDGFB-201ENST00000331163 CAPN10Q9HC96 672 aa15.53■□□□□ 0.08
PDGFB-201ENST00000331163 THAP10Q9P2Z0 257 aaPredicted RBP15.53■□□□□ 0.08
PDGFB-201ENST00000331163 ISM1B1AKI9 464 aa15.52■□□□□ 0.08
PDGFB-201ENST00000331163 COL9A1P20849 921 aa15.52■□□□□ 0.08
PDGFB-201ENST00000331163 SFSWAPQ12872 951 aaKnown RBP15.52■□□□□ 0.08
PDGFB-201ENST00000331163 HTR4Q13639 388 aa15.52■□□□□ 0.08
PDGFB-201ENST00000331163 ZNF852Q6ZMS4 543 aa15.52■□□□□ 0.08
PDGFB-201ENST00000331163 ISG20Q96AZ6 181 aaKnown RBP15.52■□□□□ 0.08
PDGFB-201ENST00000331163 TOE1Q96GM8 510 aaKnown RBP15.52■□□□□ 0.08
PDGFB-201ENST00000331163 RANBP9Q96S59 729 aa15.52■□□□□ 0.08
PDGFB-201ENST00000331163 KCNK4Q9NYG8 393 aa15.52■□□□□ 0.08
PDGFB-201ENST00000331163 PIP5K1BO14986 540 aa15.52■□□□□ 0.08
PDGFB-201ENST00000331163 UBDO15205 165 aa15.52■□□□□ 0.08
PDGFB-201ENST00000331163 HDAC3O15379 428 aa15.52■□□□□ 0.08
PDGFB-201ENST00000331163 PFKLP17858 780 aa15.52■□□□□ 0.08
PDGFB-201ENST00000331163 HTR1BP28222 390 aa15.52■□□□□ 0.08
PDGFB-201ENST00000331163 RAP1GDS1P52306 607 aa15.52■□□□□ 0.08
PDGFB-201ENST00000331163 SF1Q15637 639 aaKnown RBP15.52■□□□□ 0.08
PDGFB-201ENST00000331163 NADK2Q4G0N4 442 aa15.52■□□□□ 0.08
PDGFB-201ENST00000331163 TECRLQ5HYJ1 363 aa15.52■□□□□ 0.08
PDGFB-201ENST00000331163 TAF8Q7Z7C8 310 aa15.52■□□□□ 0.08
PDGFB-201ENST00000331163 PDSS2Q86YH6 399 aa15.52■□□□□ 0.08
PDGFB-201ENST00000331163 OR56A4Q8NGH8 313 aa15.52■□□□□ 0.08
PDGFB-201ENST00000331163 LRGUKQ96M69 825 aa15.52■□□□□ 0.08
PDGFB-201ENST00000331163 MRM3Q9HC36 420 aaKnown RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms