RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 SLC22A14Q9Y267 594 aa16.54■□□□□ 0.24
DDX41-201ENST00000330503 C15orf41Q9Y2V0 281 aa16.54■□□□□ 0.24
DDX41-201ENST00000330503 NDUFAF1Q9Y375 327 aa16.54■□□□□ 0.24
DDX41-201ENST00000330503 KCNE1BA0A087WTH5 132 aa16.54■□□□□ 0.24
DDX41-201ENST00000330503 IGLON5A6NGN9 336 aa16.54■□□□□ 0.24
DDX41-201ENST00000330503 BBIP1A8MTZ0 92 aa16.54■□□□□ 0.24
DDX41-201ENST00000330503 NPC1O15118 1278 aa16.54■□□□□ 0.24
DDX41-201ENST00000330503 ZNF8P17098 575 aaPredicted RBP16.54■□□□□ 0.24
DDX41-201ENST00000330503 ME2P23368 584 aa16.54■□□□□ 0.24
DDX41-201ENST00000330503 IL12AP29459 219 aa16.54■□□□□ 0.24
DDX41-201ENST00000330503 TIE1P35590 1138 aa16.54■□□□□ 0.24
DDX41-201ENST00000330503 SEC13P55735 322 aa16.54■□□□□ 0.24
DDX41-201ENST00000330503 SESN3P58005 492 aa16.54■□□□□ 0.24
DDX41-201ENST00000330503 HTR4Q13639 388 aa16.54■□□□□ 0.24
DDX41-201ENST00000330503 AP5B1Q2VPB7 878 aa16.54■□□□□ 0.24
DDX41-201ENST00000330503 RFTN2Q52LD8 501 aaPredicted RBP16.54■□□□□ 0.24
DDX41-201ENST00000330503 SLC44A4Q53GD3 710 aa16.54■□□□□ 0.24
DDX41-201ENST00000330503 CACUL1Q86Y37 369 aa16.54■□□□□ 0.24
DDX41-201ENST00000330503 TDHQ8IZJ6 230 aa16.54■□□□□ 0.24
DDX41-201ENST00000330503 HIPK4Q8NE63 616 aa16.54■□□□□ 0.24
DDX41-201ENST00000330503 PYDC1Q8WXC3 89 aa16.54■□□□□ 0.24
DDX41-201ENST00000330503 USP7Q93009 1102 aa16.54■□□□□ 0.24
DDX41-201ENST00000330503 GPATCH1Q9BRR8 931 aaKnown RBP16.54■□□□□ 0.24
DDX41-201ENST00000330503 SLC29A3Q9BZD2 475 aa16.54■□□□□ 0.24
DDX41-201ENST00000330503 SERGEFQ9UGK8 458 aa16.54■□□□□ 0.24
DDX41-201ENST00000330503 ZNF490Q9ULM2 529 aaPredicted RBP16.54■□□□□ 0.24
DDX41-201ENST00000330503 ASPDHA6ND91 283 aa16.53■□□□□ 0.24
DDX41-201ENST00000330503 SLC28A1O00337 649 aa16.53■□□□□ 0.24
DDX41-201ENST00000330503 ULK1O75385 1050 aa16.53■□□□□ 0.24
DDX41-201ENST00000330503 SLC22A3O75751 556 aa16.53■□□□□ 0.24
DDX41-201ENST00000330503 ITPKAP23677 461 aa16.53■□□□□ 0.24
DDX41-201ENST00000330503 BMP8BP34820 402 aa16.53■□□□□ 0.24
DDX41-201ENST00000330503 NR6A1Q15406 480 aa16.53■□□□□ 0.24
DDX41-201ENST00000330503 SGO1Q5FBB7 561 aa16.53■□□□□ 0.24
DDX41-201ENST00000330503 RNF111Q6ZNA4 994 aa16.53■□□□□ 0.24
DDX41-201ENST00000330503 KBTBD6Q86V97 674 aa16.53■□□□□ 0.24
DDX41-201ENST00000330503 CFAP206Q8IYR0 622 aa16.53■□□□□ 0.24
DDX41-201ENST00000330503 SLC26A7Q8TE54 656 aa16.53■□□□□ 0.24
DDX41-201ENST00000330503 TSPEARQ8WU66 669 aa16.53■□□□□ 0.24
DDX41-201ENST00000330503 COX14Q96I36 57 aa16.53■□□□□ 0.24
DDX41-201ENST00000330503 ZNF576Q9H609 170 aa16.53■□□□□ 0.24
DDX41-201ENST00000330503 ACTR8Q9H981 624 aa16.53■□□□□ 0.24
DDX41-201ENST00000330503 DNAJC11Q9NVH1 559 aa16.53■□□□□ 0.24
DDX41-201ENST00000330503 ADA2Q9NZK5 511 aa16.53■□□□□ 0.24
DDX41-201ENST00000330503 ZIM2Q9NZV7 527 aa16.53■□□□□ 0.24
DDX41-201ENST00000330503 TMEM181Q9P2C4 612 aa16.53■□□□□ 0.24
DDX41-201ENST00000330503 EPS15L1Q9UBC2 864 aa16.53■□□□□ 0.24
DDX41-201ENST00000330503 PCYT1BQ9Y5K3 369 aaPredicted RBP16.53■□□□□ 0.24
DDX41-201ENST00000330503 ZFC3H1O60293 1989 aaKnown RBP16.53■□□□□ 0.24
DDX41-201ENST00000330503 CKAP5Q14008 2032 aa16.53■□□□□ 0.24
DDX41-201ENST00000330503 ANHXE9PGG2 379 aa16.52■□□□□ 0.24
DDX41-201ENST00000330503 TRIM38O00635 465 aa16.52■□□□□ 0.24
DDX41-201ENST00000330503 ACOT8O14734 319 aa16.52■□□□□ 0.24
DDX41-201ENST00000330503 AP1G1O43747 822 aa16.52■□□□□ 0.24
DDX41-201ENST00000330503 AP2B1P63010 937 aa16.52■□□□□ 0.24
DDX41-201ENST00000330503 IL23RQ5VWK5 629 aa16.52■□□□□ 0.24
DDX41-201ENST00000330503 ADAMTSL4Q6UY14 1074 aa16.52■□□□□ 0.24
DDX41-201ENST00000330503 MTSS1LQ765P7 747 aa16.52■□□□□ 0.24
DDX41-201ENST00000330503 L3MBTL4Q8NA19 623 aa16.52■□□□□ 0.24
DDX41-201ENST00000330503 PROKR1Q8TCW9 393 aa16.52■□□□□ 0.24
DDX41-201ENST00000330503 JADE3Q92613 823 aa16.52■□□□□ 0.24
DDX41-201ENST00000330503 ROPN1LQ96C74 230 aa16.52■□□□□ 0.24
DDX41-201ENST00000330503 MTFMTQ96DP5 389 aaKnown RBP16.52■□□□□ 0.24
DDX41-201ENST00000330503 SPDL1Q96EA4 605 aa16.52■□□□□ 0.24
DDX41-201ENST00000330503 HIC2Q96JB3 615 aa16.52■□□□□ 0.24
DDX41-201ENST00000330503 SLC39A3Q9BRY0 314 aa16.52■□□□□ 0.24
DDX41-201ENST00000330503 ZCCHC2Q9C0B9 1178 aaKnown RBP16.52■□□□□ 0.24
DDX41-201ENST00000330503 ACTL8Q9H568 366 aa16.52■□□□□ 0.24
DDX41-201ENST00000330503 CD300AQ9UGN4 299 aa16.52■□□□□ 0.24
DDX41-201ENST00000330503 TMEM98Q9Y2Y6 226 aa16.52■□□□□ 0.24
DDX41-201ENST00000330503 TICRRQ7Z2Z1 1910 aa16.52■□□□□ 0.24
DDX41-201ENST00000330503 SZT2Q5T011 3432 aa16.52■□□□□ 0.24
DDX41-201ENST00000330503 PABPN1LA6NDY0 278 aaKnown RBP16.52■□□□□ 0.23
DDX41-201ENST00000330503 ANKRD28O15084 1053 aa16.52■□□□□ 0.23
DDX41-201ENST00000330503 G6PDP11413 515 aa16.52■□□□□ 0.23
DDX41-201ENST00000330503 MAP4P27816 1152 aaKnown RBP16.52■□□□□ 0.23
DDX41-201ENST00000330503 BDKRB1P46663 353 aa16.52■□□□□ 0.23
DDX41-201ENST00000330503 RPS14P62263 151 aaKnown RBP16.52■□□□□ 0.23
DDX41-201ENST00000330503 HMGCS1Q01581 520 aa16.52■□□□□ 0.23
DDX41-201ENST00000330503 RCAN2Q14206 197 aa16.52■□□□□ 0.23
DDX41-201ENST00000330503 CPSF6Q16630 551 aaKnown RBP eCLIP16.52■□□□□ 0.23
DDX41-201ENST00000330503 WSCD2Q2TBF2 565 aa16.52■□□□□ 0.23
DDX41-201ENST00000330503 KIAA1211LQ6NV74 962 aa16.52■□□□□ 0.23
DDX41-201ENST00000330503 PNCKQ6P2M8 343 aa16.52■□□□□ 0.23
DDX41-201ENST00000330503 TRAPPC5Q8IUR0 188 aa16.52■□□□□ 0.23
DDX41-201ENST00000330503 RGL4Q8IZJ4 473 aa16.52■□□□□ 0.23
DDX41-201ENST00000330503 HDDC3Q8N4P3 179 aa16.52■□□□□ 0.23
DDX41-201ENST00000330503 PCYOX1LQ8NBM8 494 aa16.52■□□□□ 0.23
DDX41-201ENST00000330503 FAM156AQ8NDB6 213 aa16.52■□□□□ 0.23
DDX41-201ENST00000330503 NUDT8Q8WV74 236 aa16.52■□□□□ 0.23
DDX41-201ENST00000330503 VPS33AQ96AX1 596 aa16.52■□□□□ 0.23
DDX41-201ENST00000330503 LINC00615Q96LM1 132 aaPredicted RBP16.52■□□□□ 0.23
DDX41-201ENST00000330503 PPP3R2Q96LZ3 170 aa16.52■□□□□ 0.23
DDX41-201ENST00000330503 CCDC138Q96M89 665 aa16.52■□□□□ 0.23
DDX41-201ENST00000330503 PKP4Q99569 1192 aa16.52■□□□□ 0.23
DDX41-201ENST00000330503 INTS7Q9NVH2 962 aaKnown RBP16.52■□□□□ 0.23
DDX41-201ENST00000330503 CIDEBQ9UHD4 219 aa16.52■□□□□ 0.23
DDX41-201ENST00000330503 LRRC42Q9Y546 428 aa16.52■□□□□ 0.23
DDX41-201ENST00000330503 A0A1W2PP18 115 aa16.51■□□□□ 0.23
DDX41-201ENST00000330503 LIN7AO14910 233 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms