RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 BNIP3Q12983 259 aa14.87□□□□□ -0.03
PRPF3-201ENST00000324862 LRP8Q14114 963 aa14.87□□□□□ -0.03
PRPF3-201ENST00000324862 UNC50Q53HI1 259 aa14.87□□□□□ -0.03
PRPF3-201ENST00000324862 ZNF678Q5SXM1 525 aa14.87□□□□□ -0.03
PRPF3-201ENST00000324862 LMX1AQ8TE12 382 aa14.87□□□□□ -0.03
PRPF3-201ENST00000324862 FOPNLQ96NB1 174 aa14.87□□□□□ -0.03
PRPF3-201ENST00000324862 ZNF317Q96PQ6 595 aaPredicted RBP14.87□□□□□ -0.03
PRPF3-201ENST00000324862 TNFRSF12AQ9NP84 129 aa14.87□□□□□ -0.03
PRPF3-201ENST00000324862 FGFR1OP2Q9NVK5 253 aa14.87□□□□□ -0.03
PRPF3-201ENST00000324862 PRR33A8MZF0 331 aa14.87□□□□□ -0.03
PRPF3-201ENST00000324862 GALR2O43603 387 aaPredicted RBP14.87□□□□□ -0.03
PRPF3-201ENST00000324862 VIMP08670 466 aaKnown RBP14.87□□□□□ -0.03
PRPF3-201ENST00000324862 HIST1H2AGP0C0S8 130 aaPredicted RBP14.87□□□□□ -0.03
PRPF3-201ENST00000324862 HIST1H2ADP20671 130 aa14.87□□□□□ -0.03
PRPF3-201ENST00000324862 CYP2A7P20853 494 aa14.87□□□□□ -0.03
PRPF3-201ENST00000324862 MAP4P27816 1152 aaKnown RBP14.87□□□□□ -0.03
PRPF3-201ENST00000324862 FASTKQ14296 549 aaKnown RBP14.87□□□□□ -0.03
PRPF3-201ENST00000324862 RPE65Q16518 533 aa14.87□□□□□ -0.03
PRPF3-201ENST00000324862 PDPRQ8NCN5 879 aa14.87□□□□□ -0.03
PRPF3-201ENST00000324862 MCOLN3Q8TDD5 553 aa14.87□□□□□ -0.03
PRPF3-201ENST00000324862 HIST1H2AHQ96KK5 128 aa14.87□□□□□ -0.03
PRPF3-201ENST00000324862 FERD3LQ96RJ6 166 aa14.87□□□□□ -0.03
PRPF3-201ENST00000324862 HIST1H2AJQ99878 128 aa14.87□□□□□ -0.03
PRPF3-201ENST00000324862 H2AFJQ9BTM1 129 aa14.87□□□□□ -0.03
PRPF3-201ENST00000324862 PITPNM3Q9BZ71 974 aa14.87□□□□□ -0.03
PRPF3-201ENST00000324862 XKR8Q9H6D3 395 aa14.87□□□□□ -0.03
PRPF3-201ENST00000324862 IL21RQ9HBE5 538 aa14.87□□□□□ -0.03
PRPF3-201ENST00000324862 ZBTB26Q9HCK0 441 aa14.87□□□□□ -0.03
PRPF3-201ENST00000324862 NUDT4Q9NZJ9 180 aa14.87□□□□□ -0.03
PRPF3-201ENST00000324862 MARCOQ9UEW3 520 aaPredicted RBP14.87□□□□□ -0.03
PRPF3-201ENST00000324862 CATP04040 527 aaKnown RBP14.86□□□□□ -0.03
PRPF3-201ENST00000324862 HERVK_113P63132 956 aa14.86□□□□□ -0.03
PRPF3-201ENST00000324862 PLOD1Q02809 727 aaPredicted RBP14.86□□□□□ -0.03
PRPF3-201ENST00000324862 STX3Q13277 289 aa14.86□□□□□ -0.03
PRPF3-201ENST00000324862 SETDB1Q15047 1291 aa14.86□□□□□ -0.03
PRPF3-201ENST00000324862 DCP2Q8IU60 420 aaKnown RBP14.86□□□□□ -0.03
PRPF3-201ENST00000324862 SYT12Q8IV01 421 aa14.86□□□□□ -0.03
PRPF3-201ENST00000324862 LSMEM2Q8N112 164 aa14.86□□□□□ -0.03
PRPF3-201ENST00000324862 FAM46DQ8NEK8 389 aa14.86□□□□□ -0.03
PRPF3-201ENST00000324862 FAM174AQ8TBP5 190 aa14.86□□□□□ -0.03
PRPF3-201ENST00000324862 PRR11Q96HE9 360 aaPredicted RBP14.86□□□□□ -0.03
PRPF3-201ENST00000324862 SORT1Q99523 831 aa14.86□□□□□ -0.03
PRPF3-201ENST00000324862 ERVK-6Q9BXR3 956 aa14.86□□□□□ -0.03
PRPF3-201ENST00000324862 GSTO2Q9H4Y5 243 aa14.86□□□□□ -0.03
PRPF3-201ENST00000324862 SEMA4BQ9NPR2 832 aaPredicted RBP14.86□□□□□ -0.03
PRPF3-201ENST00000324862 WWOXQ9NZC7 414 aa14.86□□□□□ -0.03
PRPF3-201ENST00000324862 PTBP2Q9UKA9 531 aaKnown RBP14.86□□□□□ -0.03
PRPF3-201ENST00000324862 UBFD1O14562 309 aaKnown RBP14.86□□□□□ -0.03
PRPF3-201ENST00000324862 SERPINE1P05121 402 aa14.86□□□□□ -0.03
PRPF3-201ENST00000324862 GNSP15586 552 aa14.86□□□□□ -0.03
PRPF3-201ENST00000324862 IMPDH1P20839 514 aa14.86□□□□□ -0.03
PRPF3-201ENST00000324862 IMPA1P29218 277 aa14.86□□□□□ -0.03
PRPF3-201ENST00000324862 PRDX3P30048 256 aaKnown RBP14.86□□□□□ -0.03
PRPF3-201ENST00000324862 SLC19A1P41440 591 aa14.86□□□□□ -0.03
PRPF3-201ENST00000324862 CTSKP43235 329 aa14.86□□□□□ -0.03
PRPF3-201ENST00000324862 SLC1A6P48664 564 aa14.86□□□□□ -0.03
PRPF3-201ENST00000324862 ALDH18A1P54886 795 aaKnown RBP14.86□□□□□ -0.03
PRPF3-201ENST00000324862 NFKB2Q00653 900 aa14.86□□□□□ -0.03
PRPF3-201ENST00000324862 SP140Q13342 867 aa14.86□□□□□ -0.03
PRPF3-201ENST00000324862 TSTA3Q13630 321 aaPredicted RBP14.86□□□□□ -0.03
PRPF3-201ENST00000324862 DEFB133Q30KQ1 61 aa14.86□□□□□ -0.03
PRPF3-201ENST00000324862 ARL13AQ5H913 290 aaPredicted RBP14.86□□□□□ -0.03
PRPF3-201ENST00000324862 TCEAL6Q6IPX3 200 aa14.86□□□□□ -0.03
PRPF3-201ENST00000324862 SUSD1Q6UWL2 747 aa14.86□□□□□ -0.03
PRPF3-201ENST00000324862 ZNF761Q86XN6 746 aaPredicted RBP14.86□□□□□ -0.03
PRPF3-201ENST00000324862 NAGSQ8N159 534 aa14.86□□□□□ -0.03
PRPF3-201ENST00000324862 ZNF548Q8NEK5 533 aaPredicted RBP14.86□□□□□ -0.03
PRPF3-201ENST00000324862 OR5K2Q8NHB8 316 aa14.86□□□□□ -0.03
PRPF3-201ENST00000324862 TCEAL3Q969E4 200 aa14.86□□□□□ -0.03
PRPF3-201ENST00000324862 CCDC134Q9H6E4 229 aa14.86□□□□□ -0.03
PRPF3-201ENST00000324862 RDH14Q9HBH5 336 aa14.86□□□□□ -0.03
PRPF3-201ENST00000324862 STOX2Q9P2F5 926 aaPredicted RBP14.86□□□□□ -0.03
PRPF3-201ENST00000324862 MID2Q9UJV3 735 aa14.86□□□□□ -0.03
PRPF3-201ENST00000324862 PCDHGA2Q9Y5H1 932 aa14.86□□□□□ -0.03
PRPF3-201ENST00000324862 ZFC3H1O60293 1989 aaKnown RBP14.86□□□□□ -0.03
PRPF3-201ENST00000324862 B4DGG1 531 aa14.85□□□□□ -0.03
PRPF3-201ENST00000324862 E2F3O00716 465 aa14.85□□□□□ -0.03
PRPF3-201ENST00000324862 YY2O15391 372 aa14.85□□□□□ -0.03
PRPF3-201ENST00000324862 CCNT2O60583 730 aaKnown RBP14.85□□□□□ -0.03
PRPF3-201ENST00000324862 SHOX2O60902 331 aaPredicted RBP14.85□□□□□ -0.03
PRPF3-201ENST00000324862 ANXA5P08758 320 aa14.85□□□□□ -0.03
PRPF3-201ENST00000324862 KITP10721 976 aa14.85□□□□□ -0.03
PRPF3-201ENST00000324862 F3P13726 295 aa14.85□□□□□ -0.03
PRPF3-201ENST00000324862 BLKP51451 505 aa14.85□□□□□ -0.03
PRPF3-201ENST00000324862 YBX1P67809 324 aaKnown RBP14.85□□□□□ -0.03
PRPF3-201ENST00000324862 SHBQ15464 509 aa14.85□□□□□ -0.03
PRPF3-201ENST00000324862 PTCHD3Q3KNS1 767 aa14.85□□□□□ -0.03
PRPF3-201ENST00000324862 ABRAXAS1Q6UWZ7 409 aa14.85□□□□□ -0.03
PRPF3-201ENST00000324862 C11orf74Q86VG3 221 aa14.85□□□□□ -0.03
PRPF3-201ENST00000324862 TRPC4APQ8TEL6 797 aa14.85□□□□□ -0.03
PRPF3-201ENST00000324862 ZNF480Q8WV37 535 aa14.85□□□□□ -0.03
PRPF3-201ENST00000324862 CDK15Q96Q40 435 aa14.85□□□□□ -0.03
PRPF3-201ENST00000324862 GSDMCQ9BYG8 508 aa14.85□□□□□ -0.03
PRPF3-201ENST00000324862 ARHGEF17Q96PE2 2063 aaPredicted RBP14.85□□□□□ -0.03
PRPF3-201ENST00000324862 TMEM233B4DJY2 109 aa14.85□□□□□ -0.03
PRPF3-201ENST00000324862 SLC16A5O15375 505 aa14.85□□□□□ -0.03
PRPF3-201ENST00000324862 SNNO75324 88 aaPredicted RBP14.85□□□□□ -0.03
PRPF3-201ENST00000324862 CNR2P34972 360 aa14.85□□□□□ -0.03
PRPF3-201ENST00000324862 DNAJB13P59910 316 aa14.85□□□□□ -0.03
PRPF3-201ENST00000324862 GRIK2Q13002 908 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms