RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 EFNA1P20827 205 aaPredicted RBP14.45□□□□□ -0.1
TCOF1-201ENST00000323668 PRPS1L1P21108 318 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 GABRB3P28472 473 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 DNAJA1P31689 397 aaKnown RBP14.45□□□□□ -0.1
TCOF1-201ENST00000323668 IL12RB1P42701 662 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 ABHD18Q0P651 414 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 GRM2Q14416 872 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 SYT16Q17RD7 645 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 MARCH8Q5T0T0 291 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 UBXN11Q5T124 520 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 LSMEM2Q8N112 164 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 ZNF557Q8N988 423 aaPredicted RBP14.45□□□□□ -0.1
TCOF1-201ENST00000323668 IGSF8Q969P0 613 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 PSKH2Q96QS6 385 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 BBS4Q96RK4 519 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 YME1L1Q96TA2 773 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 RUVBL1Q9Y265 456 aaKnown RBP14.45□□□□□ -0.1
TCOF1-201ENST00000323668 WBP11Q9Y2W2 641 aaKnown RBP14.45□□□□□ -0.1
TCOF1-201ENST00000323668 NUMBLQ9Y6R0 609 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 A0A0D9SEW6 157 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 SEPT4O43236 478 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 KRT78Q8N1N4 520 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 PHC3Q8NDX5 983 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 OR8J3Q8NGG0 315 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 ITFG2Q969R8 447 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 TIFAQ96CG3 184 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 PYURFQ96I23 114 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 TREX1Q9NSU2 369 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 USP3Q9Y6I4 520 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 TRAV19A0A0A6YYK7 116 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 TRIM43BA6NCK2 446 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 CCNDBP1O95273 360 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 C8GP07360 202 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 GPX3P22352 226 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 RPS7P62081 194 aaKnown RBP14.45□□□□□ -0.1
TCOF1-201ENST00000323668 MVKQ03426 396 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 UTS2BQ765I0 119 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 SLC34A3Q8N130 599 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 MINDY2Q8NBR6 621 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 FAR1Q8WVX9 515 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 ISL2Q96A47 359 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 PTERQ96BW5 349 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 LRCH3Q96II8 777 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 TCF25Q9BQ70 676 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 MAGEE1Q9HCI5 957 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 SSR3Q9UNL2 185 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 CEPT1Q9Y6K0 416 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 TBX1O43435 398 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 DFNA5O60443 496 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 ALPIP09923 528 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 IFNGR2P38484 337 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 PDE12Q6L8Q7 609 aaKnown RBP14.45□□□□□ -0.1
TCOF1-201ENST00000323668 ZBTB8BQ8NAP8 495 aaPredicted RBP14.45□□□□□ -0.1
TCOF1-201ENST00000323668 OR10Q1Q8NGQ4 319 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 PYCR2Q96C36 320 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 RNFT2Q96EX2 444 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 TPK1Q9H3S4 243 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 OSGEPL1Q9H4B0 414 aa14.45□□□□□ -0.1
TCOF1-201ENST00000323668 RBMX2Q9Y388 322 aaKnown RBP14.45□□□□□ -0.1
TCOF1-201ENST00000323668 NHSQ6T4R5 1651 aa14.44□□□□□ -0.1
TCOF1-201ENST00000323668 GLTPD2A6NH11 291 aa14.44□□□□□ -0.1
TCOF1-201ENST00000323668 CCNKO75909 580 aa14.44□□□□□ -0.1
TCOF1-201ENST00000323668 UGT2B15P54855 530 aa14.44□□□□□ -0.1
TCOF1-201ENST00000323668 TPTEP56180 551 aa14.44□□□□□ -0.1
TCOF1-201ENST00000323668 PMS2P3Q13401 168 aa14.44□□□□□ -0.1
TCOF1-201ENST00000323668 PTGR1Q14914 329 aa14.44□□□□□ -0.1
TCOF1-201ENST00000323668 TEAD4Q15561 434 aa14.44□□□□□ -0.1
TCOF1-201ENST00000323668 KANK2Q63ZY3 851 aa14.44□□□□□ -0.1
TCOF1-201ENST00000323668 ARHGAP12Q8IWW6 846 aa14.44□□□□□ -0.1
TCOF1-201ENST00000323668 SLC32A1Q9H598 525 aa14.44□□□□□ -0.1
TCOF1-201ENST00000323668 PGAP2Q9UHJ9 254 aa14.44□□□□□ -0.1
TCOF1-201ENST00000323668 PCDHGB3Q9Y5G1 929 aa14.44□□□□□ -0.1
TCOF1-201ENST00000323668 GPC6Q9Y625 555 aaPredicted RBP14.44□□□□□ -0.1
TCOF1-201ENST00000323668 C7orf72A4D263 438 aa14.44□□□□□ -0.1
TCOF1-201ENST00000323668 OR1I1O60431 355 aa14.44□□□□□ -0.1
TCOF1-201ENST00000323668 SLC5A2P31639 672 aa14.44□□□□□ -0.1
TCOF1-201ENST00000323668 PAQR9Q6ZVX9 377 aa14.44□□□□□ -0.1
TCOF1-201ENST00000323668 WDR36Q8NI36 951 aaKnown RBP14.44□□□□□ -0.1
TCOF1-201ENST00000323668 SEZ6LQ9BYH1 1024 aa14.44□□□□□ -0.1
TCOF1-201ENST00000323668 KRCC1Q9NPI7 259 aaPredicted RBP14.44□□□□□ -0.1
TCOF1-201ENST00000323668 PEX16Q9Y5Y5 336 aa14.44□□□□□ -0.1
TCOF1-201ENST00000323668 MBLAC1A4D2B0 266 aaPredicted RBP14.44□□□□□ -0.1
TCOF1-201ENST00000323668 CDH12P55289 794 aa14.44□□□□□ -0.1
TCOF1-201ENST00000323668 IL18R1Q13478 541 aa14.44□□□□□ -0.1
TCOF1-201ENST00000323668 KDELC1Q6UW63 502 aa14.44□□□□□ -0.1
TCOF1-201ENST00000323668 NEK10Q6ZWH5 1172 aa14.44□□□□□ -0.1
TCOF1-201ENST00000323668 C2orf15Q8WU43 125 aaKnown RBP14.44□□□□□ -0.1
TCOF1-201ENST00000323668 PIH1D2Q8WWB5 315 aa14.44□□□□□ -0.1
TCOF1-201ENST00000323668 ZNF558Q96NG5 402 aa14.44□□□□□ -0.1
TCOF1-201ENST00000323668 HDHD2Q9H0R4 259 aa14.44□□□□□ -0.1
TCOF1-201ENST00000323668 HMX1Q9NP08 348 aaPredicted RBP14.44□□□□□ -0.1
TCOF1-201ENST00000323668 DHRS7Q9Y394 339 aa14.44□□□□□ -0.1
TCOF1-201ENST00000323668 ZNF623O75123 536 aa14.44□□□□□ -0.1
TCOF1-201ENST00000323668 PRKAG1P54619 331 aa14.44□□□□□ -0.1
TCOF1-201ENST00000323668 ZNF57Q68EA5 555 aaPredicted RBP14.44□□□□□ -0.1
TCOF1-201ENST00000323668 CYP2U1Q7Z449 544 aa14.44□□□□□ -0.1
TCOF1-201ENST00000323668 TMPRSS11BQ86T26 416 aa14.44□□□□□ -0.1
TCOF1-201ENST00000323668 CHERPQ8IWX8 916 aaKnown RBP14.44□□□□□ -0.1
TCOF1-201ENST00000323668 FBXO22Q8NEZ5 403 aa14.44□□□□□ -0.1
TCOF1-201ENST00000323668 NT5C3BQ969T7 300 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms