RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 CD70P32970 193 aa17.04■□□□□ 0.32
COL9A1-201ENST00000320755 NUP107P57740 925 aa17.04■□□□□ 0.32
COL9A1-201ENST00000320755 IL1RL1Q01638 556 aa17.04■□□□□ 0.32
COL9A1-201ENST00000320755 RNF175Q8N4F7 328 aa17.04■□□□□ 0.32
COL9A1-201ENST00000320755 DCAF4L2Q8NA75 395 aa17.04■□□□□ 0.32
COL9A1-201ENST00000320755 SLC22A17Q8WUG5 538 aa17.04■□□□□ 0.32
COL9A1-201ENST00000320755 UGT2B28Q9BY64 529 aa17.04■□□□□ 0.32
COL9A1-201ENST00000320755 SMG9Q9H0W8 520 aaKnown RBP17.04■□□□□ 0.32
COL9A1-201ENST00000320755 MBD1Q9UIS9 605 aaPredicted RBP17.04■□□□□ 0.32
COL9A1-201ENST00000320755 C7P10643 843 aa17.03■□□□□ 0.32
COL9A1-201ENST00000320755 LAPTM4AQ15012 233 aa17.03■□□□□ 0.32
COL9A1-201ENST00000320755 MIPOL1Q8TD10 442 aa17.03■□□□□ 0.32
COL9A1-201ENST00000320755 SELENOMQ8WWX9 145 aa17.03■□□□□ 0.32
COL9A1-201ENST00000320755 TSEN34Q9BSV6 310 aaKnown RBP17.03■□□□□ 0.32
COL9A1-201ENST00000320755 HIPK3Q9H422 1215 aa17.03■□□□□ 0.32
COL9A1-201ENST00000320755 CIDEBQ9UHD4 219 aa17.03■□□□□ 0.32
COL9A1-201ENST00000320755 ZNF639Q9UID6 485 aa17.03■□□□□ 0.32
COL9A1-201ENST00000320755 PCDHB14Q9Y5E9 798 aa17.03■□□□□ 0.32
COL9A1-201ENST00000320755 BACE2Q9Y5Z0 518 aa17.03■□□□□ 0.32
COL9A1-201ENST00000320755 SLC28A1O00337 649 aa17.03■□□□□ 0.32
COL9A1-201ENST00000320755 ABLIM3O94929 683 aa17.03■□□□□ 0.32
COL9A1-201ENST00000320755 PDYNP01213 254 aa17.03■□□□□ 0.32
COL9A1-201ENST00000320755 PHC1P78364 1004 aa17.03■□□□□ 0.32
COL9A1-201ENST00000320755 MEP1AQ16819 746 aa17.03■□□□□ 0.32
COL9A1-201ENST00000320755 KLHL35Q6PF15 583 aa17.03■□□□□ 0.32
COL9A1-201ENST00000320755 USP51Q70EK9 711 aa17.03■□□□□ 0.32
COL9A1-201ENST00000320755 BBS7Q8IWZ6 715 aa17.03■□□□□ 0.32
COL9A1-201ENST00000320755 ALDH16A1Q8IZ83 802 aa17.03■□□□□ 0.32
COL9A1-201ENST00000320755 NXPE1Q8N323 547 aa17.03■□□□□ 0.32
COL9A1-201ENST00000320755 ZNF548Q8NEK5 533 aaPredicted RBP17.03■□□□□ 0.32
COL9A1-201ENST00000320755 OR8J3Q8NGG0 315 aa17.03■□□□□ 0.32
COL9A1-201ENST00000320755 CDC26Q8NHZ8 85 aa17.03■□□□□ 0.32
COL9A1-201ENST00000320755 INPP5KQ9BT40 448 aa17.03■□□□□ 0.32
COL9A1-201ENST00000320755 SCN5AQ14524 2016 aa17.03■□□□□ 0.32
COL9A1-201ENST00000320755 MYOFQ9NZM1 2061 aa17.03■□□□□ 0.32
COL9A1-201ENST00000320755 HS6ST1O60243 411 aa17.02■□□□□ 0.32
COL9A1-201ENST00000320755 SH3BGRLO75368 114 aa17.02■□□□□ 0.32
COL9A1-201ENST00000320755 TACR1P25103 407 aa17.02■□□□□ 0.32
COL9A1-201ENST00000320755 SPAM1P38567 509 aa17.02■□□□□ 0.32
COL9A1-201ENST00000320755 VAC14Q08AM6 782 aa17.02■□□□□ 0.32
COL9A1-201ENST00000320755 LMAN2Q12907 356 aa17.02■□□□□ 0.32
COL9A1-201ENST00000320755 BOP1Q14137 746 aaKnown RBP17.02■□□□□ 0.32
COL9A1-201ENST00000320755 ATP13A5Q4VNC0 1218 aa17.02■□□□□ 0.32
COL9A1-201ENST00000320755 CRIPAKQ8N1N5 446 aa17.02■□□□□ 0.32
COL9A1-201ENST00000320755 SNRNP27Q8WVK2 155 aaKnown RBP17.02■□□□□ 0.32
COL9A1-201ENST00000320755 TMEM169Q96HH4 297 aa17.02■□□□□ 0.32
COL9A1-201ENST00000320755 EGLN2Q96KS0 407 aa17.02■□□□□ 0.32
COL9A1-201ENST00000320755 ATP13A3Q9H7F0 1226 aa17.02■□□□□ 0.32
COL9A1-201ENST00000320755 C8orf4Q9NR00 106 aa17.02■□□□□ 0.32
COL9A1-201ENST00000320755 C1orf109Q9NX04 203 aa17.02■□□□□ 0.32
COL9A1-201ENST00000320755 CFAP97Q9P2B7 532 aa17.02■□□□□ 0.32
COL9A1-201ENST00000320755 MYO7AQ13402 2215 aa17.02■□□□□ 0.32
COL9A1-201ENST00000320755 TRIM64CA6NLI5 447 aa17.02■□□□□ 0.32
COL9A1-201ENST00000320755 PTGES3LE9PB15 166 aa17.02■□□□□ 0.32
COL9A1-201ENST00000320755 HOXD10P28358 340 aa17.02■□□□□ 0.32
COL9A1-201ENST00000320755 PIGAP37287 484 aa17.02■□□□□ 0.32
COL9A1-201ENST00000320755 BNIP3Q12983 259 aa17.02■□□□□ 0.32
COL9A1-201ENST00000320755 SPIDRQ14159 915 aa17.02■□□□□ 0.32
COL9A1-201ENST00000320755 FXNQ16595 210 aa17.02■□□□□ 0.32
COL9A1-201ENST00000320755 LRRC66Q68CR7 880 aa17.02■□□□□ 0.32
COL9A1-201ENST00000320755 R3HCC1LQ7Z5L2 792 aaKnown RBP17.02■□□□□ 0.32
COL9A1-201ENST00000320755 FRS2Q8WU20 508 aa17.02■□□□□ 0.32
COL9A1-201ENST00000320755 MYLIPQ8WY64 445 aa17.02■□□□□ 0.32
COL9A1-201ENST00000320755 FAM120BQ96EK7 910 aaKnown RBP17.02■□□□□ 0.32
COL9A1-201ENST00000320755 ITCHQ96J02 903 aa17.02■□□□□ 0.32
COL9A1-201ENST00000320755 OSBPL6Q9BZF3 934 aa17.02■□□□□ 0.32
COL9A1-201ENST00000320755 ACPTQ9BZG2 426 aa17.02■□□□□ 0.32
COL9A1-201ENST00000320755 PAIP1Q9H074 479 aaKnown RBP17.02■□□□□ 0.32
COL9A1-201ENST00000320755 AREL1O15033 823 aa17.02■□□□□ 0.31
COL9A1-201ENST00000320755 CLDN9O95484 217 aa17.02■□□□□ 0.31
COL9A1-201ENST00000320755 C1QCP02747 245 aa17.02■□□□□ 0.31
COL9A1-201ENST00000320755 ANXA5P08758 320 aa17.02■□□□□ 0.31
COL9A1-201ENST00000320755 TFPTP0C1Z6 253 aa17.02■□□□□ 0.31
COL9A1-201ENST00000320755 ZNF182P17025 639 aaPredicted RBP17.02■□□□□ 0.31
COL9A1-201ENST00000320755 MATN1P21941 496 aa17.02■□□□□ 0.31
COL9A1-201ENST00000320755 RPS3P23396 243 aaKnown RBP eCLIP17.02■□□□□ 0.31
COL9A1-201ENST00000320755 ITPKAP23677 461 aa17.02■□□□□ 0.31
COL9A1-201ENST00000320755 GABRR2P28476 465 aa17.02■□□□□ 0.31
COL9A1-201ENST00000320755 HLCSP50747 726 aa17.02■□□□□ 0.31
COL9A1-201ENST00000320755 EPHB3P54753 998 aa17.02■□□□□ 0.31
COL9A1-201ENST00000320755 ANKDD1AQ495B1 522 aa17.02■□□□□ 0.31
COL9A1-201ENST00000320755 CRTC1Q6UUV9 634 aa17.02■□□□□ 0.31
COL9A1-201ENST00000320755 NECAB2Q7Z6G3 386 aa17.02■□□□□ 0.31
COL9A1-201ENST00000320755 NETO1Q8TDF5 533 aa17.02■□□□□ 0.31
COL9A1-201ENST00000320755 ATG10Q9H0Y0 220 aa17.02■□□□□ 0.31
COL9A1-201ENST00000320755 ELOVL6Q9H5J4 265 aa17.02■□□□□ 0.31
COL9A1-201ENST00000320755 PCDHGA8Q9Y5G5 932 aa17.02■□□□□ 0.31
COL9A1-201ENST00000320755 SERPINA1P01009 418 aa17.01■□□□□ 0.31
COL9A1-201ENST00000320755 MAD2L1Q13257 205 aaPredicted RBP17.01■□□□□ 0.31
COL9A1-201ENST00000320755 ZNF783Q6ZMS7 281 aa17.01■□□□□ 0.31
COL9A1-201ENST00000320755 UBE2R2Q712K3 238 aaPredicted RBP17.01■□□□□ 0.31
COL9A1-201ENST00000320755 THAP5Q7Z6K1 395 aa17.01■□□□□ 0.31
COL9A1-201ENST00000320755 GALNT10Q86SR1 603 aa17.01■□□□□ 0.31
COL9A1-201ENST00000320755 C8orf59Q8N0T1 100 aaPredicted RBP17.01■□□□□ 0.31
COL9A1-201ENST00000320755 ADAMTS16Q8TE57 1224 aa17.01■□□□□ 0.31
COL9A1-201ENST00000320755 PLXNA4Q9HCM2 1894 aa17.01■□□□□ 0.31
COL9A1-201ENST00000320755 A0A1W2PQ67 120 aa17.01■□□□□ 0.31
COL9A1-201ENST00000320755 KRT6AP02538 564 aa17.01■□□□□ 0.31
COL9A1-201ENST00000320755 KRT6BP04259 564 aa17.01■□□□□ 0.31
COL9A1-201ENST00000320755 IL6P05231 212 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms