RNA–Protein interactions for RNA: ENST00000308271.13

USP48-201, Transcript of ubiquitin specific peptidase 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP48, Length 4,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-201ENST00000308271 NARS2Q96I59 477 aaKnown RBP18.96■□□□□ 0.63
USP48-201ENST00000308271 COL21A1Q96P44 957 aa18.96■□□□□ 0.63
USP48-201ENST00000308271 TSGA13Q96PP4 275 aa18.96■□□□□ 0.63
USP48-201ENST00000308271 FUNDC2Q9BWH2 189 aa18.96■□□□□ 0.63
USP48-201ENST00000308271 ZNF232Q9UNY5 417 aa18.96■□□□□ 0.63
USP48-201ENST00000308271 CDC7O00311 574 aa18.96■□□□□ 0.63
USP48-201ENST00000308271 CDK14O94921 469 aa18.96■□□□□ 0.63
USP48-201ENST00000308271 GALNT1Q10472 559 aaPredicted RBP18.96■□□□□ 0.63
USP48-201ENST00000308271 SERPINA9Q86WD7 417 aa18.96■□□□□ 0.63
USP48-201ENST00000308271 TRAPPC5Q8IUR0 188 aa18.96■□□□□ 0.63
USP48-201ENST00000308271 CEP97Q8IW35 865 aa18.96■□□□□ 0.63
USP48-201ENST00000308271 IZUMO1Q8IYV9 350 aa18.96■□□□□ 0.63
USP48-201ENST00000308271 OR7D4Q8NG98 312 aa18.96■□□□□ 0.63
USP48-201ENST00000308271 NECTIN3Q9NQS3 549 aa18.96■□□□□ 0.63
USP48-201ENST00000308271 RUVBL1Q9Y265 456 aaKnown RBP18.96■□□□□ 0.63
USP48-201ENST00000308271 PRG2P13727 222 aa18.96■□□□□ 0.63
USP48-201ENST00000308271 PRPS1L1P21108 318 aa18.96■□□□□ 0.63
USP48-201ENST00000308271 ATP12AP54707 1039 aa18.96■□□□□ 0.63
USP48-201ENST00000308271 SNAPC1Q16533 368 aa18.96■□□□□ 0.63
USP48-201ENST00000308271 SETMARQ53H47 684 aaPredicted RBP18.96■□□□□ 0.63
USP48-201ENST00000308271 KIAA1614Q5VZ46 1190 aa18.96■□□□□ 0.63
USP48-201ENST00000308271 BLOC1S3Q6QNY0 202 aa18.96■□□□□ 0.63
USP48-201ENST00000308271 ARFGAP1Q8N6T3 406 aa18.96■□□□□ 0.63
USP48-201ENST00000308271 OR8J3Q8NGG0 315 aa18.96■□□□□ 0.63
USP48-201ENST00000308271 USP7Q93009 1102 aa18.96■□□□□ 0.63
USP48-201ENST00000308271 POLR2J2Q9GZM3 115 aaKnown RBP18.96■□□□□ 0.63
USP48-201ENST00000308271 KLRG2A4D1S0 409 aaPredicted RBP18.95■□□□□ 0.62
USP48-201ENST00000308271 CLIC1O00299 241 aa18.95■□□□□ 0.62
USP48-201ENST00000308271 SPAM1P38567 509 aa18.95■□□□□ 0.62
USP48-201ENST00000308271 ABATP80404 500 aa18.95■□□□□ 0.62
USP48-201ENST00000308271 CHIT1Q13231 466 aa18.95■□□□□ 0.62
USP48-201ENST00000308271 PLD1Q13393 1074 aa18.95■□□□□ 0.62
USP48-201ENST00000308271 C6orf136Q5SQH8 315 aa18.95■□□□□ 0.62
USP48-201ENST00000308271 GALNT12Q8IXK2 581 aa18.95■□□□□ 0.62
USP48-201ENST00000308271 FAIM2Q9BWQ8 316 aa18.95■□□□□ 0.62
USP48-201ENST00000308271 N4BP2Q86UW6 1770 aaPredicted RBP18.95■□□□□ 0.62
USP48-201ENST00000308271 DCLK1O15075 740 aa18.95■□□□□ 0.62
USP48-201ENST00000308271 POU2F1P14859 743 aa18.95■□□□□ 0.62
USP48-201ENST00000308271 CYP4F8P98187 520 aa18.95■□□□□ 0.62
USP48-201ENST00000308271 GRB7Q14451 532 aa18.95■□□□□ 0.62
USP48-201ENST00000308271 RAET1EQ8TD07 263 aa18.95■□□□□ 0.62
USP48-201ENST00000308271 MRPL9Q9BYD2 267 aaKnown RBP18.95■□□□□ 0.62
USP48-201ENST00000308271 CAPN10Q9HC96 672 aa18.95■□□□□ 0.62
USP48-201ENST00000308271 TM9SF3Q9HD45 589 aa18.95■□□□□ 0.62
USP48-201ENST00000308271 CCDC177Q9NQR7 707 aaPredicted RBP18.95■□□□□ 0.62
USP48-201ENST00000308271 PDLIM7Q9NR12 457 aa18.95■□□□□ 0.62
USP48-201ENST00000308271 ZCWPW2A0A1B0GU75 182 aa18.95■□□□□ 0.62
USP48-201ENST00000308271 NRP1O14786 923 aa18.95■□□□□ 0.62
USP48-201ENST00000308271 SLC28A2O43868 658 aa18.95■□□□□ 0.62
USP48-201ENST00000308271 GADD45GO95257 159 aa18.95■□□□□ 0.62
USP48-201ENST00000308271 PGK1P00558 417 aa18.95■□□□□ 0.62
USP48-201ENST00000308271 ZNF181Q2M3W8 571 aa18.95■□□□□ 0.62
USP48-201ENST00000308271 RAB6CQ53S08 254 aa18.95■□□□□ 0.62
USP48-201ENST00000308271 FAM117BQ6P1L5 589 aa18.95■□□□□ 0.62
USP48-201ENST00000308271 ABHD11Q8NFV4 315 aa18.95■□□□□ 0.62
USP48-201ENST00000308271 GPR152Q8TDT2 470 aa18.95■□□□□ 0.62
USP48-201ENST00000308271 NPLQ9BXD5 320 aaPredicted RBP18.95■□□□□ 0.62
USP48-201ENST00000308271 RAB6CQ9H0N0 254 aa18.95■□□□□ 0.62
USP48-201ENST00000308271 MBD2Q9UBB5 411 aa18.95■□□□□ 0.62
USP48-201ENST00000308271 SEC14L3Q9UDX4 400 aa18.95■□□□□ 0.62
USP48-201ENST00000308271 XPNPEP2O43895 674 aa18.95■□□□□ 0.62
USP48-201ENST00000308271 BMP7P18075 431 aa18.95■□□□□ 0.62
USP48-201ENST00000308271 EPHX2P34913 555 aa18.95■□□□□ 0.62
USP48-201ENST00000308271 LGALS3BPQ08380 585 aa18.95■□□□□ 0.62
USP48-201ENST00000308271 UNC50Q53HI1 259 aa18.95■□□□□ 0.62
USP48-201ENST00000308271 EEF1AKMT1Q8WVE0 214 aa18.95■□□□□ 0.62
USP48-201ENST00000308271 RWDD3Q9Y3V2 267 aa18.95■□□□□ 0.62
USP48-201ENST00000308271 PEX10O60683 326 aa18.94■□□□□ 0.62
USP48-201ENST00000308271 C1RP00736 705 aa18.94■□□□□ 0.62
USP48-201ENST00000308271 STC1P52823 247 aa18.94■□□□□ 0.62
USP48-201ENST00000308271 MFSD2AQ8NA29 543 aa18.94■□□□□ 0.62
USP48-201ENST00000308271 RHEBL1Q8TAI7 183 aa18.94■□□□□ 0.62
USP48-201ENST00000308271 RANBP9Q96S59 729 aa18.94■□□□□ 0.62
USP48-201ENST00000308271 SLC30A2Q9BRI3 323 aa18.94■□□□□ 0.62
USP48-201ENST00000308271 HERC2P3Q9BVR0 1158 aa18.94■□□□□ 0.62
USP48-201ENST00000308271 HAPLN2Q9GZV7 340 aa18.94■□□□□ 0.62
USP48-201ENST00000308271 RNF38Q9H0F5 515 aa18.94■□□□□ 0.62
USP48-201ENST00000308271 POFUT2Q9Y2G5 429 aa18.94■□□□□ 0.62
USP48-201ENST00000308271 RPL36Q9Y3U8 105 aaKnown RBP18.94■□□□□ 0.62
USP48-201ENST00000308271 NME4O00746 187 aa18.94■□□□□ 0.62
USP48-201ENST00000308271 GABBR2O75899 941 aa18.94■□□□□ 0.62
USP48-201ENST00000308271 OR4Q2P0C623 313 aa18.94■□□□□ 0.62
USP48-201ENST00000308271 CD52P31358 61 aa18.94■□□□□ 0.62
USP48-201ENST00000308271 CENPAP49450 140 aa18.94■□□□□ 0.62
USP48-201ENST00000308271 CDH4P55283 916 aa18.94■□□□□ 0.62
USP48-201ENST00000308271 DSC3Q14574 896 aa18.94■□□□□ 0.62
USP48-201ENST00000308271 PRAMEF19Q5SWL8 479 aa18.94■□□□□ 0.62
USP48-201ENST00000308271 CXCL17Q6UXB2 119 aa18.94■□□□□ 0.62
USP48-201ENST00000308271 DCDC5Q6ZRR9 648 aa18.94■□□□□ 0.62
USP48-201ENST00000308271 ZBTB48P10074 688 aaPredicted RBP18.94■□□□□ 0.62
USP48-201ENST00000308271 BMXP51813 675 aa18.94■□□□□ 0.62
USP48-201ENST00000308271 MANFP55145 182 aaKnown RBP18.94■□□□□ 0.62
USP48-201ENST00000308271 FCGRTP55899 365 aa18.94■□□□□ 0.62
USP48-201ENST00000308271 C11orf24Q96F05 449 aaPredicted RBP18.94■□□□□ 0.62
USP48-201ENST00000308271 GFM1Q96RP9 751 aaKnown RBP18.94■□□□□ 0.62
USP48-201ENST00000308271 BCL7BQ9BQE9 202 aa18.94■□□□□ 0.62
USP48-201ENST00000308271 C20orf27Q9GZN8 174 aa18.94■□□□□ 0.62
USP48-201ENST00000308271 AIG1Q9NVV5 245 aa18.94■□□□□ 0.62
USP48-201ENST00000308271 PAK1IP1Q9NWT1 392 aaPredicted RBP18.94■□□□□ 0.62
USP48-201ENST00000308271 ZNF282Q9UDV7 671 aaPredicted RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms