RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 CEP41Q9BYV8 373 aa11.37□□□□□ -0.59
SMIM4-201ENST00000307106 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.37□□□□□ -0.59
SMIM4-201ENST00000307106 TFB2MQ9H5Q4 396 aaKnown RBP11.37□□□□□ -0.59
SMIM4-201ENST00000307106 XKR8Q9H6D3 395 aa11.37□□□□□ -0.59
SMIM4-201ENST00000307106 SOX17Q9H6I2 414 aaPredicted RBP11.37□□□□□ -0.59
SMIM4-201ENST00000307106 GPAMQ9HCL2 828 aa11.37□□□□□ -0.59
SMIM4-201ENST00000307106 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.37□□□□□ -0.59
SMIM4-201ENST00000307106 PTGFRNQ9P2B2 879 aa11.37□□□□□ -0.59
SMIM4-201ENST00000307106 TMEM200CA6NKL6 621 aa11.36□□□□□ -0.59
SMIM4-201ENST00000307106 HPP00738 406 aa11.36□□□□□ -0.59
SMIM4-201ENST00000307106 F10P00742 488 aa11.36□□□□□ -0.59
SMIM4-201ENST00000307106 PYGMP11217 842 aa11.36□□□□□ -0.59
SMIM4-201ENST00000307106 PIM1P11309 404 aaPredicted RBP11.36□□□□□ -0.59
SMIM4-201ENST00000307106 KLK2P20151 261 aa11.36□□□□□ -0.59
SMIM4-201ENST00000307106 ITGAXP20702 1163 aa11.36□□□□□ -0.59
SMIM4-201ENST00000307106 ARSEP51690 589 aa11.36□□□□□ -0.59
SMIM4-201ENST00000307106 PPP2R2AP63151 447 aa11.36□□□□□ -0.59
SMIM4-201ENST00000307106 PPIDQ08752 370 aaKnown RBP11.36□□□□□ -0.59
SMIM4-201ENST00000307106 SLC10A2Q12908 348 aaPredicted RBP11.36□□□□□ -0.59
SMIM4-201ENST00000307106 TTLL10Q6ZVT0 673 aa11.36□□□□□ -0.59
SMIM4-201ENST00000307106 CCDC110Q8TBZ0 833 aa11.36□□□□□ -0.59
SMIM4-201ENST00000307106 DLG3Q92796 817 aa11.36□□□□□ -0.59
SMIM4-201ENST00000307106 TADA1Q96BN2 335 aa11.36□□□□□ -0.59
SMIM4-201ENST00000307106 MAGED4Q96JG8 741 aa11.36□□□□□ -0.59
SMIM4-201ENST00000307106 LINC00615Q96LM1 132 aaPredicted RBP11.36□□□□□ -0.59
SMIM4-201ENST00000307106 TREX2Q9BQ50 279 aaPredicted RBP11.36□□□□□ -0.59
SMIM4-201ENST00000307106 CHRNA10Q9GZZ6 450 aa11.36□□□□□ -0.59
SMIM4-201ENST00000307106 SLC26A1Q9H2B4 701 aa11.36□□□□□ -0.59
SMIM4-201ENST00000307106 GSX1Q9H4S2 264 aaPredicted RBP11.36□□□□□ -0.59
SMIM4-201ENST00000307106 ZNF160Q9HCG1 818 aa11.36□□□□□ -0.59
SMIM4-201ENST00000307106 SMOXQ9NWM0 555 aa11.36□□□□□ -0.59
SMIM4-201ENST00000307106 MEMO1Q9Y316 297 aa11.36□□□□□ -0.59
SMIM4-201ENST00000307106 MAP1AP78559 2803 aaPredicted RBP11.36□□□□□ -0.59
SMIM4-201ENST00000307106 AKAP6Q13023 2319 aa11.36□□□□□ -0.59
SMIM4-201ENST00000307106 PHF3Q92576 2039 aaKnown RBP11.35□□□□□ -0.59
SMIM4-201ENST00000307106 A0A1B0GX78 115 aa11.35□□□□□ -0.59
SMIM4-201ENST00000307106 GAPDHSO14556 408 aaPredicted RBP11.35□□□□□ -0.59
SMIM4-201ENST00000307106 USP1O94782 785 aa11.35□□□□□ -0.59
SMIM4-201ENST00000307106 MYBL1P10243 752 aa11.35□□□□□ -0.59
SMIM4-201ENST00000307106 GZMAP12544 262 aa11.35□□□□□ -0.59
SMIM4-201ENST00000307106 UGT2B7P16662 529 aa11.35□□□□□ -0.59
SMIM4-201ENST00000307106 DNAJA1P31689 397 aaKnown RBP11.35□□□□□ -0.59
SMIM4-201ENST00000307106 SOX11P35716 441 aa11.35□□□□□ -0.59
SMIM4-201ENST00000307106 SSR1P43307 286 aaKnown RBP11.35□□□□□ -0.59
SMIM4-201ENST00000307106 IST1P53990 364 aa11.35□□□□□ -0.59
SMIM4-201ENST00000307106 PMP22Q01453 160 aa11.35□□□□□ -0.59
SMIM4-201ENST00000307106 PRKG2Q13237 762 aa11.35□□□□□ -0.59
SMIM4-201ENST00000307106 NOMO1Q15155 1222 aa11.35□□□□□ -0.59
SMIM4-201ENST00000307106 LONRF1Q17RB8 773 aa11.35□□□□□ -0.59
SMIM4-201ENST00000307106 BCL7AQ4VC05 210 aa11.35□□□□□ -0.59
SMIM4-201ENST00000307106 CDKAL1Q5VV42 579 aa11.35□□□□□ -0.59
SMIM4-201ENST00000307106 NCCRP1Q6ZVX7 275 aaPredicted RBP11.35□□□□□ -0.59
SMIM4-201ENST00000307106 COX15Q7KZN9 410 aa11.35□□□□□ -0.59
SMIM4-201ENST00000307106 KBTBD2Q8IY47 623 aa11.35□□□□□ -0.59
SMIM4-201ENST00000307106 NIPA2Q8N8Q9 360 aa11.35□□□□□ -0.59
SMIM4-201ENST00000307106 PHC3Q8NDX5 983 aa11.35□□□□□ -0.59
SMIM4-201ENST00000307106 CHDHQ8NE62 594 aaPredicted RBP11.35□□□□□ -0.59
SMIM4-201ENST00000307106 SPATA22Q8NHS9 363 aa11.35□□□□□ -0.59
SMIM4-201ENST00000307106 HM13Q8TCT9 377 aa11.35□□□□□ -0.59
SMIM4-201ENST00000307106 BRIX1Q8TDN6 353 aaKnown RBP11.35□□□□□ -0.59
SMIM4-201ENST00000307106 PSMF1Q92530 271 aa11.35□□□□□ -0.59
SMIM4-201ENST00000307106 TRIM11Q96F44 468 aa11.35□□□□□ -0.59
SMIM4-201ENST00000307106 BTBD6Q96KE9 485 aa11.35□□□□□ -0.59
SMIM4-201ENST00000307106 ZNF830Q96NB3 372 aaPredicted RBP11.35□□□□□ -0.59
SMIM4-201ENST00000307106 MESP1Q9BRJ9 268 aa11.35□□□□□ -0.59
SMIM4-201ENST00000307106 ZNF670Q9BS34 389 aa11.35□□□□□ -0.59
SMIM4-201ENST00000307106 TMEM121Q9BTD3 319 aa11.35□□□□□ -0.59
SMIM4-201ENST00000307106 HGH1Q9BTY7 390 aa11.35□□□□□ -0.59
SMIM4-201ENST00000307106 SLC25A51Q9H1U9 297 aa11.35□□□□□ -0.59
SMIM4-201ENST00000307106 TRABDQ9H4I3 376 aa11.35□□□□□ -0.59
SMIM4-201ENST00000307106 FANCLQ9NW38 375 aa11.35□□□□□ -0.59
SMIM4-201ENST00000307106 IL17CQ9P0M4 197 aa11.35□□□□□ -0.59
SMIM4-201ENST00000307106 TNFRSF10DQ9UBN6 386 aa11.35□□□□□ -0.59
SMIM4-201ENST00000307106 NXT1Q9UKK6 140 aaKnown RBP11.35□□□□□ -0.59
SMIM4-201ENST00000307106 PLCL2Q9UPR0 1127 aa11.35□□□□□ -0.59
SMIM4-201ENST00000307106 MRPS2Q9Y399 296 aaKnown RBP11.35□□□□□ -0.59
SMIM4-201ENST00000307106 A0A0J9YY10 115 aa11.34□□□□□ -0.59
SMIM4-201ENST00000307106 IFRD1O00458 451 aaPredicted RBP11.34□□□□□ -0.59
SMIM4-201ENST00000307106 MAP2K7O14733 419 aa11.34□□□□□ -0.59
SMIM4-201ENST00000307106 BUD23O43709 281 aaKnown RBP11.34□□□□□ -0.59
SMIM4-201ENST00000307106 PMPCBO75439 489 aa11.34□□□□□ -0.59
SMIM4-201ENST00000307106 WISP2O76076 250 aa11.34□□□□□ -0.59
SMIM4-201ENST00000307106 ONECUT2O95948 504 aa11.34□□□□□ -0.59
SMIM4-201ENST00000307106 UQCRHP07919 91 aa11.34□□□□□ -0.59
SMIM4-201ENST00000307106 ACPPP15309 386 aa11.34□□□□□ -0.59
SMIM4-201ENST00000307106 GJC1P36383 396 aa11.34□□□□□ -0.59
SMIM4-201ENST00000307106 GCGRP47871 477 aa11.34□□□□□ -0.59
SMIM4-201ENST00000307106 ARSFP54793 590 aa11.34□□□□□ -0.59
SMIM4-201ENST00000307106 UBXN1Q04323 297 aa11.34□□□□□ -0.59
SMIM4-201ENST00000307106 AP1B1Q10567 949 aa11.34□□□□□ -0.59
SMIM4-201ENST00000307106 SLC14A2Q15849 920 aa11.34□□□□□ -0.59
SMIM4-201ENST00000307106 ATP13A4Q4VNC1 1196 aa11.34□□□□□ -0.59
SMIM4-201ENST00000307106 TMEM200AQ86VY9 491 aa11.34□□□□□ -0.59
SMIM4-201ENST00000307106 DNAJC22Q8N4W6 341 aa11.34□□□□□ -0.59
SMIM4-201ENST00000307106 SIRT6Q8N6T7 355 aa11.34□□□□□ -0.59
SMIM4-201ENST00000307106 PQLC3Q8N755 202 aa11.34□□□□□ -0.59
SMIM4-201ENST00000307106 SUN3Q8TAQ9 357 aa11.34□□□□□ -0.59
SMIM4-201ENST00000307106 ZNF398Q8TD17 642 aa11.34□□□□□ -0.59
SMIM4-201ENST00000307106 DENND1AQ8TEH3 1009 aa11.34□□□□□ -0.59
SMIM4-201ENST00000307106 CA5BP1Q8WTZ4 195 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms