RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 DOCK8Q8NF50 2099 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 SLC5A10A0PJK1 596 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 ARHGEF33A8MVX0 844 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 PSMD11O00231 422 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 KPNA5O15131 536 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 SLC16A5O15375 505 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 LILRB5O75023 590 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 ULK1O75385 1050 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 RECQL5O94762 991 aaPredicted RBP6.39□□□□□ -1.39
USP47-201ENST00000305481 CLDN9O95484 217 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 FTH1P02794 183 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 C8BP07358 591 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 ADRB3P13945 408 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 SLC2A4P14672 509 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 NFKBIAP25963 317 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 PDHA2P29803 388 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 GJA4P35212 333 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 IL12RB1P42701 662 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 PRLHRP49683 370 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 HNMTP50135 292 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 PFN3P60673 137 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 ABRQ12979 859 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 SP140Q13342 867 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 EIF4HQ15056 248 aaKnown RBP6.39□□□□□ -1.39
USP47-201ENST00000305481 PDGFRLQ15198 375 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 TRIP10Q15642 601 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 CPSF6Q16630 551 aaKnown RBP eCLIP6.39□□□□□ -1.39
USP47-201ENST00000305481 TIGD2Q4W5G0 525 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 RABL3Q5HYI8 236 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 HABP4Q5JVS0 413 aaKnown RBP6.39□□□□□ -1.39
USP47-201ENST00000305481 OGFRL1Q5TC84 451 aaPredicted RBP6.39□□□□□ -1.39
USP47-201ENST00000305481 ZFP1Q6P2D0 407 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 FBXL19Q6PCT2 694 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 CYP2R1Q6VVX0 501 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 CYP2U1Q7Z449 544 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 SPATA24Q86W54 205 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 UCMAQ8WVF2 138 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 OR8D1Q8WZ84 308 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 TMEM125Q96AQ2 219 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 PKP2Q99959 881 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 CXorf56Q9H5V9 222 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 C6orf203Q9P0P8 240 aaPredicted RBP6.39□□□□□ -1.39
USP47-201ENST00000305481 LRCH1Q9Y2L9 728 aa6.39□□□□□ -1.39
USP47-201ENST00000305481 TCRBV3S1A0A5B6 114 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 TBC1D3BA6NDS4 549 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 CCDC154A6NI56 674 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 NPC1O15118 1278 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 MMP20O60882 483 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 PSIP1O75475 530 aaKnown RBP6.38□□□□□ -1.39
USP47-201ENST00000305481 RNASEH2AO75792 299 aaKnown RBP6.38□□□□□ -1.39
USP47-201ENST00000305481 WDR47O94967 919 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 PDYNP01213 254 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 HIST1H2AGP0C0S8 130 aaPredicted RBP6.38□□□□□ -1.39
USP47-201ENST00000305481 HIST1H2ADP20671 130 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 NEK2P51955 445 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 AQP4P55087 323 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 RPL38P63173 70 aaKnown RBP6.38□□□□□ -1.39
USP47-201ENST00000305481 RHDQ02161 417 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 PTGR1Q14914 329 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 C1QTNF12Q5T7M4 302 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 TTC23LQ6PF05 361 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 SLC2A7Q6PXP3 512 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 TMEM220Q6QAJ8 160 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 LRRC70Q7Z2Q7 622 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 MMAAQ8IVH4 418 aaKnown RBP6.38□□□□□ -1.39
USP47-201ENST00000305481 TMEM102Q8N9M5 508 aaPredicted RBP6.38□□□□□ -1.39
USP47-201ENST00000305481 DNAJB14Q8TBM8 379 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 FAM110BQ8TC76 370 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 HIST1H2AHQ96KK5 128 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 MYADMQ96S97 322 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 HIST1H2AJQ99878 128 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 CCM2Q9BSQ5 444 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 H2AFJQ9BTM1 129 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 ACPTQ9BZG2 426 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 KLHL4Q9C0H6 718 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 ATG10Q9H0Y0 220 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 COPS7BQ9H9Q2 264 aaPredicted RBP6.38□□□□□ -1.39
USP47-201ENST00000305481 ZFP14Q9HCL3 533 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 MRPL40Q9NQ50 206 aaKnown RBP6.38□□□□□ -1.39
USP47-201ENST00000305481 PRSS16Q9NQE7 514 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 INTS7Q9NVH2 962 aaKnown RBP6.38□□□□□ -1.39
USP47-201ENST00000305481 TMEM45AQ9NWC5 275 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 CIDEBQ9UHD4 219 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 NEUROG3Q9Y4Z2 214 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 SLC28A1O00337 649 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 RGS14O43566 566 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 CAPNS1P04632 268 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 GSTM1P09488 218 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 C6P13671 934 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 HSD17B1P14061 328 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 ATP6V1B2P21281 511 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 ITPKAP23677 461 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 DGKQP52824 942 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 GSTM4Q03013 218 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 HYAL1Q12794 435 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 PRKG2Q13237 762 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 RUNX3Q13761 415 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 NFYCQ13952 458 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 PPP2R2DQ66LE6 453 aa6.38□□□□□ -1.39
USP47-201ENST00000305481 DLEU7Q6UYE1 221 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms