RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 EMCNQ9ULC0 261 aa26.42■■□□□ 1.82
HDAC3-201ENST00000305264 FAM186AA6NE01 2351 aa26.42■■□□□ 1.82
HDAC3-201ENST00000305264 TK2O00142 265 aa26.41■■□□□ 1.82
HDAC3-201ENST00000305264 TYROBPO43914 113 aa26.41■■□□□ 1.82
HDAC3-201ENST00000305264 CCT5P48643 541 aa26.41■■□□□ 1.82
HDAC3-201ENST00000305264 HHEXQ03014 270 aa26.41■■□□□ 1.82
HDAC3-201ENST00000305264 KRT33BQ14525 404 aa26.41■■□□□ 1.82
HDAC3-201ENST00000305264 SUZ12Q15022 739 aaKnown RBP26.41■■□□□ 1.82
HDAC3-201ENST00000305264 DBX2Q6ZNG2 339 aa26.41■■□□□ 1.82
HDAC3-201ENST00000305264 SLC9B2Q86UD5 537 aa26.41■■□□□ 1.82
HDAC3-201ENST00000305264 ALKBH8Q96BT7 664 aaKnown RBP26.41■■□□□ 1.82
HDAC3-201ENST00000305264 NRTNQ99748 197 aa26.41■■□□□ 1.82
HDAC3-201ENST00000305264 MVB12BQ9H7P6 319 aa26.41■■□□□ 1.82
HDAC3-201ENST00000305264 PARVBQ9HBI1 364 aa26.41■■□□□ 1.82
HDAC3-201ENST00000305264 SLC40A1Q9NP59 571 aa26.41■■□□□ 1.82
HDAC3-201ENST00000305264 TDRKHQ9Y2W6 561 aaKnown RBP26.41■■□□□ 1.82
HDAC3-201ENST00000305264 C4orf47A7E2U8 309 aa26.4■■□□□ 1.82
HDAC3-201ENST00000305264 SLC16A5O15375 505 aa26.4■■□□□ 1.82
HDAC3-201ENST00000305264 VIPP01282 170 aa26.4■■□□□ 1.82
HDAC3-201ENST00000305264 MBOAT1Q6ZNC8 495 aa26.4■■□□□ 1.82
HDAC3-201ENST00000305264 EXT2Q93063 718 aa26.4■■□□□ 1.82
HDAC3-201ENST00000305264 APOLD1Q96LR9 279 aa26.4■■□□□ 1.82
HDAC3-201ENST00000305264 ATOH8Q96SQ7 321 aa26.4■■□□□ 1.82
HDAC3-201ENST00000305264 PLAGL1Q9UM63 463 aa26.4■■□□□ 1.82
HDAC3-201ENST00000305264 LY6G6EA0A0G2JKS1 128 aa26.4■■□□□ 1.82
HDAC3-201ENST00000305264 RPN2P04844 631 aa26.4■■□□□ 1.82
HDAC3-201ENST00000305264 CD59P13987 128 aa26.4■■□□□ 1.82
HDAC3-201ENST00000305264 CYP2A7P20853 494 aa26.4■■□□□ 1.82
HDAC3-201ENST00000305264 FASLGP48023 281 aa26.4■■□□□ 1.82
HDAC3-201ENST00000305264 GRB7Q14451 532 aa26.4■■□□□ 1.82
HDAC3-201ENST00000305264 RHEBL1Q8TAI7 183 aa26.4■■□□□ 1.82
HDAC3-201ENST00000305264 STAG3L4Q8TBR4 150 aa26.4■■□□□ 1.82
HDAC3-201ENST00000305264 RNF112Q9ULX5 631 aa26.4■■□□□ 1.82
HDAC3-201ENST00000305264 COLEC10Q9Y6Z7 277 aa26.4■■□□□ 1.82
HDAC3-201ENST00000305264 U3KQA8 63 aa26.4■■□□□ 1.82
HDAC3-201ENST00000305264 KERAO60938 352 aa26.39■■□□□ 1.82
HDAC3-201ENST00000305264 TPBGLP0DKB5 382 aa26.39■■□□□ 1.82
HDAC3-201ENST00000305264 MAP4P27816 1152 aaKnown RBP26.39■■□□□ 1.82
HDAC3-201ENST00000305264 GRK6P43250 576 aa26.39■■□□□ 1.82
HDAC3-201ENST00000305264 SLC14A1Q13336 389 aa26.39■■□□□ 1.82
HDAC3-201ENST00000305264 GPR18Q14330 331 aa26.39■■□□□ 1.82
HDAC3-201ENST00000305264 FRA10AC1Q70Z53 315 aa26.39■■□□□ 1.82
HDAC3-201ENST00000305264 ZNF761Q86XN6 746 aaPredicted RBP26.39■■□□□ 1.82
HDAC3-201ENST00000305264 TMEM151AQ8N4L1 468 aa26.39■■□□□ 1.82
HDAC3-201ENST00000305264 JPH3Q8WXH2 748 aaPredicted RBP26.39■■□□□ 1.82
HDAC3-201ENST00000305264 CAMK1GQ96NX5 476 aa26.39■■□□□ 1.82
HDAC3-201ENST00000305264 KIR3DX1Q9H7L2 352 aa26.39■■□□□ 1.82
HDAC3-201ENST00000305264 SSU72Q9NP77 194 aaKnown RBP26.39■■□□□ 1.82
HDAC3-201ENST00000305264 CPSF2Q9P2I0 782 aaKnown RBP26.39■■□□□ 1.82
HDAC3-201ENST00000305264 OARD1Q9Y530 152 aa26.39■■□□□ 1.82
HDAC3-201ENST00000305264 PPM1DO15297 605 aa26.38■■□□□ 1.81
HDAC3-201ENST00000305264 FLRT2O43155 660 aa26.38■■□□□ 1.81
HDAC3-201ENST00000305264 FOXD2O60548 495 aaPredicted RBP26.38■■□□□ 1.81
HDAC3-201ENST00000305264 SBK3P0C264 359 aa26.38■■□□□ 1.81
HDAC3-201ENST00000305264 KPNA2P52292 529 aaKnown RBP26.38■■□□□ 1.81
HDAC3-201ENST00000305264 CHCHD2P9Q5T1J5 151 aaPredicted RBP26.38■■□□□ 1.81
HDAC3-201ENST00000305264 FAM181AQ8N9Y4 354 aa26.38■■□□□ 1.81
HDAC3-201ENST00000305264 FBXO15Q8NCQ5 510 aaPredicted RBP26.38■■□□□ 1.81
HDAC3-201ENST00000305264 TCP10LQ8TDR4 215 aa26.38■■□□□ 1.81
HDAC3-201ENST00000305264 PKNOX2Q96KN3 472 aa26.38■■□□□ 1.81
HDAC3-201ENST00000305264 IQCGQ9H095 443 aaKnown RBP26.38■■□□□ 1.81
HDAC3-201ENST00000305264 MRPL46Q9H2W6 279 aaKnown RBP26.38■■□□□ 1.81
HDAC3-201ENST00000305264 SLC17A7Q9P2U7 560 aa26.38■■□□□ 1.81
HDAC3-201ENST00000305264 GRID1Q9ULK0 1009 aa26.38■■□□□ 1.81
HDAC3-201ENST00000305264 HMGB1P1B2RPK0 211 aaPredicted RBP26.38■■□□□ 1.81
HDAC3-201ENST00000305264 ENO2P09104 434 aaPredicted RBP26.38■■□□□ 1.81
HDAC3-201ENST00000305264 NDUFS1P28331 727 aa26.38■■□□□ 1.81
HDAC3-201ENST00000305264 RPIAP49247 311 aa26.38■■□□□ 1.81
HDAC3-201ENST00000305264 TGFBIQ15582 683 aa26.38■■□□□ 1.81
HDAC3-201ENST00000305264 GPSM1Q86YR5 675 aa26.38■■□□□ 1.81
HDAC3-201ENST00000305264 OR52E1Q8NGJ3 308 aa26.38■■□□□ 1.81
HDAC3-201ENST00000305264 MCOLN3Q8TDD5 553 aa26.38■■□□□ 1.81
HDAC3-201ENST00000305264 MRPL57Q9BQC6 102 aaKnown RBP26.38■■□□□ 1.81
HDAC3-201ENST00000305264 PLLPQ9Y342 182 aa26.38■■□□□ 1.81
HDAC3-201ENST00000305264 NCF1BA6NI72 391 aaPredicted RBP26.37■■□□□ 1.81
HDAC3-201ENST00000305264 NCF1CA8MVU1 366 aaPredicted RBP26.37■■□□□ 1.81
HDAC3-201ENST00000305264 UBXN8O00124 270 aa26.37■■□□□ 1.81
HDAC3-201ENST00000305264 MYO1CO00159 1063 aa26.37■■□□□ 1.81
HDAC3-201ENST00000305264 GUCA1CO95843 209 aa26.37■■□□□ 1.81
HDAC3-201ENST00000305264 RBP1P09455 135 aa26.37■■□□□ 1.81
HDAC3-201ENST00000305264 NCF1P14598 390 aaPredicted RBP26.37■■□□□ 1.81
HDAC3-201ENST00000305264 RPA3P35244 121 aaPredicted RBP26.37■■□□□ 1.81
HDAC3-201ENST00000305264 INAVAQ3KP66 663 aa26.37■■□□□ 1.81
HDAC3-201ENST00000305264 MAGEC3Q8TD91 643 aa26.37■■□□□ 1.81
HDAC3-201ENST00000305264 SETD7Q8WTS6 366 aaKnown RBP26.37■■□□□ 1.81
HDAC3-201ENST00000305264 RAD51AP1Q96B01 352 aa26.37■■□□□ 1.81
HDAC3-201ENST00000305264 PKP4Q99569 1192 aa26.37■■□□□ 1.81
HDAC3-201ENST00000305264 POLG2Q9UHN1 485 aa26.37■■□□□ 1.81
HDAC3-201ENST00000305264 RNF215Q9Y6U7 377 aa26.37■■□□□ 1.81
HDAC3-201ENST00000305264 PLIN3O60664 434 aa26.37■■□□□ 1.81
HDAC3-201ENST00000305264 PROCP04070 461 aa26.37■■□□□ 1.81
HDAC3-201ENST00000305264 MPP2Q14168 576 aa26.37■■□□□ 1.81
HDAC3-201ENST00000305264 PROX2Q3B8N5 592 aa26.37■■□□□ 1.81
HDAC3-201ENST00000305264 TTC23LQ6PF05 361 aa26.37■■□□□ 1.81
HDAC3-201ENST00000305264 IL17FQ96PD4 163 aa26.37■■□□□ 1.81
HDAC3-201ENST00000305264 MENTQ9BUN1 341 aa26.37■■□□□ 1.81
HDAC3-201ENST00000305264 STN1Q9H668 368 aaKnown RBP26.37■■□□□ 1.81
HDAC3-201ENST00000305264 RDH14Q9HBH5 336 aa26.37■■□□□ 1.81
HDAC3-201ENST00000305264 ARL15Q9NXU5 204 aa26.37■■□□□ 1.81
HDAC3-201ENST00000305264 SPEGQ15772 3267 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms