RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 SLC43A3Q8NBI5 491 aa12.62□□□□□ -0.39
COL3A1-201ENST00000304636 ART5Q96L15 291 aa12.62□□□□□ -0.39
COL3A1-201ENST00000304636 ACAT2Q9BWD1 397 aa12.62□□□□□ -0.39
COL3A1-201ENST00000304636 TVP23BQ9NYZ1 205 aa12.62□□□□□ -0.39
COL3A1-201ENST00000304636 CNOT11Q9UKZ1 510 aaKnown RBP12.62□□□□□ -0.39
COL3A1-201ENST00000304636 SH3PXD2BA1X283 911 aa12.62□□□□□ -0.39
COL3A1-201ENST00000304636 RIIAD1A6NNX1 92 aa12.62□□□□□ -0.39
COL3A1-201ENST00000304636 NOTOA8MTQ0 251 aa12.62□□□□□ -0.39
COL3A1-201ENST00000304636 TSPAN4O14817 238 aa12.62□□□□□ -0.39
COL3A1-201ENST00000304636 FFAR2O15552 330 aa12.62□□□□□ -0.39
COL3A1-201ENST00000304636 HLA-DQB2P05538 268 aa12.62□□□□□ -0.39
COL3A1-201ENST00000304636 IL7RP16871 459 aa12.62□□□□□ -0.39
COL3A1-201ENST00000304636 ZNF182P17025 639 aaPredicted RBP12.62□□□□□ -0.39
COL3A1-201ENST00000304636 CLCN4P51793 760 aa12.62□□□□□ -0.39
COL3A1-201ENST00000304636 WSCD2Q2TBF2 565 aa12.62□□□□□ -0.39
COL3A1-201ENST00000304636 TLDC1Q6P9B6 456 aa12.62□□□□□ -0.39
COL3A1-201ENST00000304636 PQLC3Q8N755 202 aa12.62□□□□□ -0.39
COL3A1-201ENST00000304636 RNASE11Q8TAA1 199 aaKnown RBP12.62□□□□□ -0.39
COL3A1-201ENST00000304636 OSBPL2Q9H1P3 480 aa12.62□□□□□ -0.39
COL3A1-201ENST00000304636 TOR3AQ9H497 397 aa12.62□□□□□ -0.39
COL3A1-201ENST00000304636 NMUR1Q9HB89 426 aa12.62□□□□□ -0.39
COL3A1-201ENST00000304636 NEK6Q9HC98 313 aa12.62□□□□□ -0.39
COL3A1-201ENST00000304636 AMBNQ9NP70 447 aa12.62□□□□□ -0.39
COL3A1-201ENST00000304636 MYBPHLA2RUH7 354 aa12.62□□□□□ -0.39
COL3A1-201ENST00000304636 IL1BP01584 269 aa12.62□□□□□ -0.39
COL3A1-201ENST00000304636 ASGR1P07306 291 aa12.62□□□□□ -0.39
COL3A1-201ENST00000304636 ATF4P18848 351 aaPredicted RBP12.62□□□□□ -0.39
COL3A1-201ENST00000304636 POM121L1PQ3SYA9 428 aa12.62□□□□□ -0.39
COL3A1-201ENST00000304636 SYPL2Q5VXT5 272 aa12.62□□□□□ -0.39
COL3A1-201ENST00000304636 ZNF433Q8N7K0 673 aaPredicted RBP12.62□□□□□ -0.39
COL3A1-201ENST00000304636 FERD3LQ96RJ6 166 aa12.62□□□□□ -0.39
COL3A1-201ENST00000304636 TWNKQ96RR1 684 aa12.62□□□□□ -0.39
COL3A1-201ENST00000304636 AASSQ9UDR5 926 aa12.62□□□□□ -0.39
COL3A1-201ENST00000304636 PIK3C2AO00443 1686 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 A0A1B0GVM2 712 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 ABHD14A-ACY1A0A1B0GW23 586 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 SAGP10523 405 aaPredicted RBP12.61□□□□□ -0.39
COL3A1-201ENST00000304636 CREMQ03060 361 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 DNASE1L3Q13609 305 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 SLITRK4Q8IW52 837 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 OR7D4Q8NG98 312 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 PYURFQ96I23 114 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 SLC45A3Q96JT2 553 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 CCDC177Q9NQR7 707 aaPredicted RBP12.61□□□□□ -0.39
COL3A1-201ENST00000304636 ZFP37Q9Y6Q3 630 aaPredicted RBP12.61□□□□□ -0.39
COL3A1-201ENST00000304636 XRN1Q8IZH2 1706 aaKnown RBP12.61□□□□□ -0.39
COL3A1-201ENST00000304636 ZNF879B4DU55 563 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 OR4Q2P0C623 313 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 FPR1P21462 350 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 ARSFP54793 590 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 RGS8P57771 180 aaPredicted RBP12.61□□□□□ -0.39
COL3A1-201ENST00000304636 PPP2R2BQ00005 443 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 CYP2U1Q7Z449 544 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 KCNC2Q96PR1 638 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 CDK15Q96Q40 435 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 TMEM106CQ9BVX2 250 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 PCP4L1A6NKN8 68 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 GRM6O15303 877 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 C22orf31O95567 290 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 IFNA7P01567 189 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 NSG1P42857 185 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 ARFIP1P53367 373 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 MAPK12P53778 367 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 UFM1P61960 85 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 MAP2K5Q13163 448 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 ATP6AP1Q15904 470 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 PGBD2Q6P3X8 592 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 TSPEARQ8WU66 669 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 POLR2J3Q9H1A7 115 aaKnown RBP12.61□□□□□ -0.39
COL3A1-201ENST00000304636 ASAH2Q9NR71 780 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 PIGVQ9NUD9 493 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 POLR3BQ9NW08 1133 aaPredicted RBP12.61□□□□□ -0.39
COL3A1-201ENST00000304636 CALML5Q9NZT1 146 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 FNIP2Q9P278 1114 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 DCDC1P59894 354 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 NFKB2Q00653 900 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 DUSP4Q13115 394 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 DSC3Q14574 896 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 TNFAIP8L1Q8WVP5 186 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 KCTD13Q8WZ19 329 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 RERGQ96A58 199 aaPredicted RBP12.61□□□□□ -0.39
COL3A1-201ENST00000304636 HAVCR1Q96D42 359 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 TMEM27Q9HBJ8 222 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 NCKAP1Q9Y2A7 1128 aa12.61□□□□□ -0.39
COL3A1-201ENST00000304636 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.61□□□□□ -0.39
COL3A1-201ENST00000304636 IQCF5A8MTL0 148 aa12.6□□□□□ -0.39
COL3A1-201ENST00000304636 CLIC1O00299 241 aa12.6□□□□□ -0.39
COL3A1-201ENST00000304636 PITPNM1O00562 1244 aa12.6□□□□□ -0.39
COL3A1-201ENST00000304636 ZNF311Q5JNZ3 666 aa12.6□□□□□ -0.39
COL3A1-201ENST00000304636 IDNKQ5T6J7 187 aa12.6□□□□□ -0.39
COL3A1-201ENST00000304636 MAP1SQ66K74 1059 aaPredicted RBP12.6□□□□□ -0.39
COL3A1-201ENST00000304636 CLEC20AQ6ZU45 233 aa12.6□□□□□ -0.39
COL3A1-201ENST00000304636 LGI4Q8N135 537 aa12.6□□□□□ -0.39
COL3A1-201ENST00000304636 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.6□□□□□ -0.39
COL3A1-201ENST00000304636 SNX33Q8WV41 574 aa12.6□□□□□ -0.39
COL3A1-201ENST00000304636 CEP295NLQ96MC4 621 aa12.6□□□□□ -0.39
COL3A1-201ENST00000304636 ZNF558Q96NG5 402 aa12.6□□□□□ -0.39
COL3A1-201ENST00000304636 COL21A1Q96P44 957 aa12.6□□□□□ -0.39
COL3A1-201ENST00000304636 IRF2BPLQ9H1B7 796 aa12.6□□□□□ -0.39
COL3A1-201ENST00000304636 EIF3KQ9UBQ5 218 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms