RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 CITED4Q96RK1 184 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 TNKS2Q9H2K2 1166 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 A0A1W2PQH9 124 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 UPK3BL1B0FP48 263 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 UPK3BL2E5RIL1 263 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 GPR32O75388 356 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 LHX1P48742 406 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 DGKEP52429 567 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 ZFP69Q49AA0 526 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 PRAMEF19Q5SWL8 479 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 HIPK1Q86Z02 1210 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 NLGN4XQ8N0W4 816 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 DEPDC4Q8N2C3 294 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 PGBD5Q8N414 524 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 PARP16Q8N5Y8 322 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 ISG20Q96AZ6 181 aaKnown RBP14.38□□□□□ -0.11
COL6A2-201ENST00000300527 PGAP3Q96FM1 320 aaPredicted RBP14.38□□□□□ -0.11
COL6A2-201ENST00000300527 OR51E2Q9H255 320 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 RUBCNLQ9H714 662 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 NMUR1Q9HB89 426 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 PLSCR3Q9NRY6 295 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 PIM2Q9P1W9 311 aa14.38□□□□□ -0.11
COL6A2-201ENST00000300527 AGAP5A6NIR3 686 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 HHLA1C9JL84 531 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 MED26O95402 600 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 MMP2P08253 660 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 GRK3P35626 688 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 SLC26A3P40879 764 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 DEFA1P59665 94 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 DEFA3P59666 94 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 IL2P60568 153 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 SLC35A2P78381 396 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 CREMQ03060 361 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 MVKQ03426 396 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 XKR7Q5GH72 579 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 GDPD3Q7L5L3 318 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 CFAP52Q8N1V2 620 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 TCAIMQ8N3R3 496 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 ATP6V0D2Q8N8Y2 350 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 RHEBL1Q8TAI7 183 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 RHBDF1Q96CC6 855 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 KCNC2Q96PR1 638 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 COPS4Q9BT78 406 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 IPPKQ9H8X2 491 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 ABI2Q9NYB9 513 aaPredicted RBP14.37□□□□□ -0.11
COL6A2-201ENST00000300527 RNF6Q9Y252 685 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 N6AMT1Q9Y5N5 214 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 THSD7AQ9UPZ6 1657 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 SLC12A8A0AV02 714 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 TREHO43280 583 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 DAPP51397 102 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 TIGD6Q17RP2 521 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 TIGD5Q53EQ6 642 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 SPANXN2Q5MJ10 180 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 TAPT1Q6NXT6 567 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 GLT6D1Q7Z4J2 308 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 DPP9Q86TI2 863 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 ULK4Q96C45 1275 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 RDH12Q96NR8 316 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 TMEM246Q9BRR3 403 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 NUSAP1Q9BXS6 441 aaKnown RBP14.37□□□□□ -0.11
COL6A2-201ENST00000300527 SLC25A37Q9NYZ2 338 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 AFF4Q9UHB7 1163 aaKnown RBP14.37□□□□□ -0.11
COL6A2-201ENST00000300527 NEU3Q9UQ49 428 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 LCTP09848 1927 aa14.37□□□□□ -0.11
COL6A2-201ENST00000300527 MROH6A6NGR9 719 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 MUSKO15146 869 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 C1QCP02747 245 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 ATXN1LP0C7T5 689 aaKnown RBP14.36□□□□□ -0.11
COL6A2-201ENST00000300527 SMIM10L2AP0DMW4 78 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 SMIM10L2BP0DMW5 78 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 COL6A1P12109 1028 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 PIK3R6Q5UE93 754 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 SMYD5Q6GMV2 418 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 ZCCHC8Q6NZY4 707 aaKnown RBP14.36□□□□□ -0.11
COL6A2-201ENST00000300527 AMER2Q8N7J2 671 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 CLIP3Q96DZ5 547 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.36□□□□□ -0.11
COL6A2-201ENST00000300527 ZW10O43264 779 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 NDST3O95803 873 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 PGRP06401 933 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 PCSK1P29120 753 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 DDR2Q16832 855 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 SPATS1Q496A3 300 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 RGMBQ6NW40 437 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 TRAF7Q6Q0C0 670 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 PJA1Q8NG27 643 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 UTP15Q8TED0 518 aaKnown RBP14.36□□□□□ -0.11
COL6A2-201ENST00000300527 GTF2H4Q92759 462 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 PPP1R2P1Q96PQ5 205 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 INPP5KQ9BT40 448 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 DERL2Q9GZP9 239 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 MIOSQ9NXC5 875 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 PAQR5Q9NXK6 330 aaPredicted RBP14.36□□□□□ -0.11
COL6A2-201ENST00000300527 SPO11Q9Y5K1 396 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 RLFQ13129 1914 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 LCHNA4D1U4 455 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 CENPXA8MT69 81 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 LOC110117498-PIK3R3F6TDL0 507 aa14.36□□□□□ -0.11
COL6A2-201ENST00000300527 SH3BGRLO75368 114 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms