RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 GLUD1P00367 558 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 CYP11A1P05108 521 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 VMACQ2NL98 169 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 LCN1P1Q5VSP4 162 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 RANBP3LQ86VV4 465 aaPredicted RBP11.88□□□□□ -0.51
PCF11-201ENST00000298281 GPR65Q8IYL9 337 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 KCTD4Q8WVF5 259 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 SLC7A6OSQ96CW6 309 aaPredicted RBP11.88□□□□□ -0.51
PCF11-201ENST00000298281 ZNF69Q9UC07 566 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 TMEM11P17152 192 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 GOT1P17174 413 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 SLC25A3Q00325 362 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 NIPAL4Q0D2K0 466 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 DPF1Q92782 380 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 MYO19Q96H55 970 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 DIRAS2Q96HU8 199 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 A8MUA0 341 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 FPGTO14772 594 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 GNPDA1P46926 289 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 LIPEQ05469 1076 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 RAB12Q6IQ22 244 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 OR2T12Q8NG77 320 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 TBL1XR1Q9BZK7 514 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 UBIAD1Q9Y5Z9 338 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 SCAMP1O15126 338 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 BUD23O43709 281 aaKnown RBP11.88□□□□□ -0.51
PCF11-201ENST00000298281 PSMA1P25786 263 aaKnown RBP11.88□□□□□ -0.51
PCF11-201ENST00000298281 WNT3AP56704 352 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 YBEYP58557 167 aaPredicted RBP11.88□□□□□ -0.51
PCF11-201ENST00000298281 APOBEC3HQ6NTF7 200 aaKnown RBP11.88□□□□□ -0.51
PCF11-201ENST00000298281 CEP76Q8TAP6 659 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 NPLOC4Q8TAT6 608 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 EXOSC8Q96B26 276 aaKnown RBP11.88□□□□□ -0.51
PCF11-201ENST00000298281 GLIS2Q9BZE0 524 aaPredicted RBP11.88□□□□□ -0.51
PCF11-201ENST00000298281 TBCCD1Q9NVR7 557 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 CALML5Q9NZT1 146 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 ADGRE2Q9UHX3 823 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 FBXL3Q9UKT7 428 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 YARS2Q9Y2Z4 477 aaKnown RBP11.88□□□□□ -0.51
PCF11-201ENST00000298281 REXO2Q9Y3B8 237 aaKnown RBP11.88□□□□□ -0.51
PCF11-201ENST00000298281 PTPRMP28827 1452 aa11.88□□□□□ -0.51
PCF11-201ENST00000298281 KIAA1210Q9ULL0 1709 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 MFSD11O43934 449 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 NRP2O60462 931 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 TRBC1P01850 177 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 GSTT1P30711 240 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 DHPSP49366 369 aaPredicted RBP11.87□□□□□ -0.51
PCF11-201ENST00000298281 GRK1Q15835 563 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 FAM35AQ86V20 835 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 TBC1D17Q9HA65 648 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 SLC28A3Q9HAS3 691 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 CFL2Q9Y281 166 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 ABCA9Q8IUA7 1624 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 SAGE2PA6NJ88 616 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 RTCAO00442 366 aaKnown RBP11.87□□□□□ -0.51
PCF11-201ENST00000298281 ALOX15BO15296 676 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 PTDSS1P48651 473 aaKnown RBP11.87□□□□□ -0.51
PCF11-201ENST00000298281 NOGQ13253 232 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 VGLL4Q14135 290 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 IDNKQ5T6J7 187 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 COX18Q8N8Q8 333 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 PNPLA2Q96AD5 504 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 C17orf62Q9BQA9 187 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 TTPALQ9BTX7 342 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 CDH19Q9H159 772 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 DHX33Q9H6R0 707 aaKnown RBP11.87□□□□□ -0.51
PCF11-201ENST00000298281 NCOA3Q9Y6Q9 1424 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 IL7RP16871 459 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 GNRHRP30968 328 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 KIR3DL1P43629 444 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 ACTR1AP61163 376 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 MXD1Q05195 221 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 TYSND1Q2T9J0 566 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 TOR1AIP2Q8NFQ8 470 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 NXF3Q9H4D5 531 aaKnown RBP11.87□□□□□ -0.51
PCF11-201ENST00000298281 RBM47A0AV96 593 aaKnown RBP11.87□□□□□ -0.51
PCF11-201ENST00000298281 CSF2P04141 144 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 CRADDP78560 199 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 FASTKD3Q14CZ7 662 aaKnown RBP11.87□□□□□ -0.51
PCF11-201ENST00000298281 ADGRA1Q86SQ6 560 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 SAMD14Q8IZD0 417 aaPredicted RBP11.87□□□□□ -0.51
PCF11-201ENST00000298281 CCDC107Q8WV48 283 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 KLHL6Q8WZ60 621 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 RBM4BQ9BQ04 359 aaKnown RBP11.87□□□□□ -0.51
PCF11-201ENST00000298281 RBM4Q9BWF3 364 aaKnown RBP11.87□□□□□ -0.51
PCF11-201ENST00000298281 ABCG2Q9UNQ0 655 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 TUSC3Q13454 348 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 ATPAF1Q5TC12 328 aaPredicted RBP11.87□□□□□ -0.51
PCF11-201ENST00000298281 NPNTQ6UXI9 565 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 OR7G1Q8NGA0 311 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 PTPN18Q99952 460 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 WDR18Q9BV38 432 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 IL1RAPQ9NPH3 570 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 PADI2Q9Y2J8 665 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 NFATC1O95644 943 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 IFNGR1P15260 489 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 CD247P20963 164 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 IDSP22304 550 aa11.87□□□□□ -0.51
PCF11-201ENST00000298281 MAT2AP31153 395 aaKnown RBP11.87□□□□□ -0.51
PCF11-201ENST00000298281 PTGS2P35354 604 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms