RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 MAP4P27816 1152 aaKnown RBP13.92□□□□□ -0.18
C9orf3-202ENST00000297979 RANBP1P43487 201 aa13.92□□□□□ -0.18
C9orf3-202ENST00000297979 TBL3Q12788 808 aaKnown RBP13.92□□□□□ -0.18
C9orf3-202ENST00000297979 ABRQ12979 859 aa13.92□□□□□ -0.18
C9orf3-202ENST00000297979 GSTA3Q16772 222 aa13.92□□□□□ -0.18
C9orf3-202ENST00000297979 ZNF658BQ4V348 819 aaPredicted RBP13.92□□□□□ -0.18
C9orf3-202ENST00000297979 IL27RAQ6UWB1 636 aa13.92□□□□□ -0.18
C9orf3-202ENST00000297979 ADAMTSL4Q6UY14 1074 aa13.92□□□□□ -0.18
C9orf3-202ENST00000297979 NET1Q7Z628 596 aaPredicted RBP13.92□□□□□ -0.18
C9orf3-202ENST00000297979 PLA2G15Q8NCC3 412 aa13.92□□□□□ -0.18
C9orf3-202ENST00000297979 OR2T11Q8NH01 316 aa13.92□□□□□ -0.18
C9orf3-202ENST00000297979 WDR60Q8WVS4 1066 aa13.92□□□□□ -0.18
C9orf3-202ENST00000297979 TRPS1Q9UHF7 1281 aa13.92□□□□□ -0.18
C9orf3-202ENST00000297979 SZT2Q5T011 3432 aa13.92□□□□□ -0.18
C9orf3-202ENST00000297979 H3BQ06 376 aaPredicted RBP13.91□□□□□ -0.18
C9orf3-202ENST00000297979 LIN7AO14910 233 aaPredicted RBP13.91□□□□□ -0.18
C9orf3-202ENST00000297979 RNASEH2AO75792 299 aaKnown RBP13.91□□□□□ -0.18
C9orf3-202ENST00000297979 EGFP01133 1207 aa13.91□□□□□ -0.18
C9orf3-202ENST00000297979 IDO1P14902 403 aa13.91□□□□□ -0.18
C9orf3-202ENST00000297979 GPX3P22352 226 aa13.91□□□□□ -0.18
C9orf3-202ENST00000297979 SLC6A12P48065 614 aa13.91□□□□□ -0.18
C9orf3-202ENST00000297979 HTR6P50406 440 aa13.91□□□□□ -0.18
C9orf3-202ENST00000297979 STX5Q13190 355 aa13.91□□□□□ -0.18
C9orf3-202ENST00000297979 ART3Q13508 389 aa13.91□□□□□ -0.18
C9orf3-202ENST00000297979 PON2Q15165 354 aa13.91□□□□□ -0.18
C9orf3-202ENST00000297979 SMUG1Q53HV7 270 aa13.91□□□□□ -0.18
C9orf3-202ENST00000297979 TMEM196Q5HYL7 178 aa13.91□□□□□ -0.18
C9orf3-202ENST00000297979 C6orf163Q5TEZ5 329 aa13.91□□□□□ -0.18
C9orf3-202ENST00000297979 PNCKQ6P2M8 343 aa13.91□□□□□ -0.18
C9orf3-202ENST00000297979 DSELQ8IZU8 1212 aa13.91□□□□□ -0.18
C9orf3-202ENST00000297979 MIER2Q8N344 545 aa13.91□□□□□ -0.18
C9orf3-202ENST00000297979 CFAP61Q8NHU2 1237 aa13.91□□□□□ -0.18
C9orf3-202ENST00000297979 ARHGEF33A8MVX0 844 aa13.91□□□□□ -0.18
C9orf3-202ENST00000297979 WDR47O94967 919 aa13.91□□□□□ -0.18
C9orf3-202ENST00000297979 CATP04040 527 aaKnown RBP13.91□□□□□ -0.18
C9orf3-202ENST00000297979 PCCBP05166 539 aa13.91□□□□□ -0.18
C9orf3-202ENST00000297979 SNRPB2P08579 225 aaKnown RBP13.91□□□□□ -0.18
C9orf3-202ENST00000297979 CCND1P24385 295 aa13.91□□□□□ -0.18
C9orf3-202ENST00000297979 TRMT5Q32P41 509 aaKnown RBP13.91□□□□□ -0.18
C9orf3-202ENST00000297979 PAOXQ6QHF9 649 aa13.91□□□□□ -0.18
C9orf3-202ENST00000297979 CCDC80Q76M96 950 aa13.91□□□□□ -0.18
C9orf3-202ENST00000297979 RALGPS2Q86X27 583 aaPredicted RBP13.91□□□□□ -0.18
C9orf3-202ENST00000297979 OR9I1Q8NGQ6 314 aa13.91□□□□□ -0.18
C9orf3-202ENST00000297979 FBXL8Q96CD0 374 aa13.91□□□□□ -0.18
C9orf3-202ENST00000297979 COX14Q96I36 57 aa13.91□□□□□ -0.18
C9orf3-202ENST00000297979 LINC00615Q96LM1 132 aaPredicted RBP13.91□□□□□ -0.18
C9orf3-202ENST00000297979 FOPNLQ96NB1 174 aa13.91□□□□□ -0.18
C9orf3-202ENST00000297979 SLC25A23Q9BV35 468 aa13.91□□□□□ -0.18
C9orf3-202ENST00000297979 FBRSQ9HAH7 460 aa13.91□□□□□ -0.18
C9orf3-202ENST00000297979 SDR39U1Q9NRG7 319 aaPredicted RBP13.91□□□□□ -0.18
C9orf3-202ENST00000297979 GULP1Q9UBP9 304 aa13.91□□□□□ -0.18
C9orf3-202ENST00000297979 GPR34Q9UPC5 381 aa13.91□□□□□ -0.18
C9orf3-202ENST00000297979 PIAS3Q9Y6X2 628 aa13.91□□□□□ -0.18
C9orf3-202ENST00000297979 ZFC3H1O60293 1989 aaKnown RBP13.91□□□□□ -0.18
C9orf3-202ENST00000297979 LOC730098B7Z3J9 87 aa13.91□□□□□ -0.18
C9orf3-202ENST00000297979 ZNF8P17098 575 aaPredicted RBP13.91□□□□□ -0.18
C9orf3-202ENST00000297979 ZXDCQ2QGD7 858 aaPredicted RBP13.91□□□□□ -0.18
C9orf3-202ENST00000297979 PTCHD3Q3KNS1 767 aa13.91□□□□□ -0.18
C9orf3-202ENST00000297979 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.91□□□□□ -0.18
C9orf3-202ENST00000297979 HEATR4Q86WZ0 1026 aa13.91□□□□□ -0.18
C9orf3-202ENST00000297979 SNX31Q8N9S9 440 aa13.91□□□□□ -0.18
C9orf3-202ENST00000297979 IL17RCQ8NAC3 791 aa13.91□□□□□ -0.18
C9orf3-202ENST00000297979 MAGEC3Q8TD91 643 aa13.91□□□□□ -0.18
C9orf3-202ENST00000297979 GIMAP1Q8WWP7 306 aa13.91□□□□□ -0.18
C9orf3-202ENST00000297979 NPAS2Q99743 824 aa13.91□□□□□ -0.18
C9orf3-202ENST00000297979 MRPL1Q9BYD6 325 aaKnown RBP13.91□□□□□ -0.18
C9orf3-202ENST00000297979 MKRN2Q9H000 416 aaKnown RBP13.91□□□□□ -0.18
C9orf3-202ENST00000297979 PRPF19Q9UMS4 504 aaKnown RBP13.91□□□□□ -0.18
C9orf3-202ENST00000297979 C2CD4DB7Z1M9 353 aa13.9□□□□□ -0.18
C9orf3-202ENST00000297979 H3BM21 787 aa13.9□□□□□ -0.18
C9orf3-202ENST00000297979 E2F6O75461 281 aa13.9□□□□□ -0.18
C9orf3-202ENST00000297979 EPORP19235 508 aa13.9□□□□□ -0.18
C9orf3-202ENST00000297979 ERVK-8P63133 956 aa13.9□□□□□ -0.18
C9orf3-202ENST00000297979 AGERQ15109 404 aa13.9□□□□□ -0.18
C9orf3-202ENST00000297979 RPS6KA2Q15349 733 aa13.9□□□□□ -0.18
C9orf3-202ENST00000297979 WSCD2Q2TBF2 565 aa13.9□□□□□ -0.18
C9orf3-202ENST00000297979 ATP6AP1LQ52LC2 224 aa13.9□□□□□ -0.18
C9orf3-202ENST00000297979 PGM2L1Q6PCE3 622 aa13.9□□□□□ -0.18
C9orf3-202ENST00000297979 CRTC3Q6UUV7 619 aa13.9□□□□□ -0.18
C9orf3-202ENST00000297979 RNF165Q6ZSG1 346 aa13.9□□□□□ -0.18
C9orf3-202ENST00000297979 Q6ZSR9 355 aa13.9□□□□□ -0.18
C9orf3-202ENST00000297979 ZNF547Q8IVP9 402 aa13.9□□□□□ -0.18
C9orf3-202ENST00000297979 PGAM4Q8N0Y7 254 aa13.9□□□□□ -0.18
C9orf3-202ENST00000297979 GANCQ8TET4 914 aa13.9□□□□□ -0.18
C9orf3-202ENST00000297979 SLC29A3Q9BZD2 475 aa13.9□□□□□ -0.18
C9orf3-202ENST00000297979 RNPEPL1Q9HAU8 725 aa13.9□□□□□ -0.18
C9orf3-202ENST00000297979 HEBP1Q9NRV9 189 aa13.9□□□□□ -0.18
C9orf3-202ENST00000297979 AIG1Q9NVV5 245 aa13.9□□□□□ -0.18
C9orf3-202ENST00000297979 RNF11Q9Y3C5 154 aa13.9□□□□□ -0.18
C9orf3-202ENST00000297979 TMEM265A0A087WTH1 108 aa13.9□□□□□ -0.18
C9orf3-202ENST00000297979 C17orf113A0A1B0GUU1 675 aa13.9□□□□□ -0.18
C9orf3-202ENST00000297979 KRT87PA6NCN2 255 aa13.9□□□□□ -0.18
C9orf3-202ENST00000297979 GRXCR2A6NFK2 248 aa13.9□□□□□ -0.18
C9orf3-202ENST00000297979 ADAM23O75077 832 aa13.9□□□□□ -0.18
C9orf3-202ENST00000297979 ATP6V1G1O75348 118 aa13.9□□□□□ -0.18
C9orf3-202ENST00000297979 PDE5AO76074 875 aa13.9□□□□□ -0.18
C9orf3-202ENST00000297979 KLF8O95600 359 aaPredicted RBP13.9□□□□□ -0.18
C9orf3-202ENST00000297979 LMNAP02545 664 aaKnown RBP13.9□□□□□ -0.18
C9orf3-202ENST00000297979 HOXB2P14652 356 aa13.9□□□□□ -0.18
C9orf3-202ENST00000297979 PDHA2P29803 388 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms