RNA–Protein interactions for RNA: ENST00000294785.9

NCSTN-201, Transcript of nicastrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCSTN, Length 2,936 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-201ENST00000294785 IKZF5Q9H5V7 419 aa13.39□□□□□ -0.27
NCSTN-201ENST00000294785 LMCD1Q9NZU5 365 aa13.39□□□□□ -0.27
NCSTN-201ENST00000294785 AFF4Q9UHB7 1163 aaKnown RBP13.39□□□□□ -0.27
NCSTN-201ENST00000294785 FCF1Q9Y324 198 aaKnown RBP13.39□□□□□ -0.27
NCSTN-201ENST00000294785 MAGED1Q9Y5V3 778 aaPredicted RBP13.39□□□□□ -0.27
NCSTN-201ENST00000294785 ANAPC1Q9H1A4 1944 aa13.39□□□□□ -0.27
NCSTN-201ENST00000294785 A0A0U1RQS6 177 aa13.39□□□□□ -0.27
NCSTN-201ENST00000294785 NT5C1B-RDH14C9J2C7 533 aa13.39□□□□□ -0.27
NCSTN-201ENST00000294785 B4GAT1O43505 415 aa13.39□□□□□ -0.27
NCSTN-201ENST00000294785 TBL1XO60907 577 aa13.39□□□□□ -0.27
NCSTN-201ENST00000294785 SOCS5O75159 536 aa13.39□□□□□ -0.27
NCSTN-201ENST00000294785 CREG1O75629 220 aa13.39□□□□□ -0.27
NCSTN-201ENST00000294785 RECQL5O94762 991 aaPredicted RBP13.39□□□□□ -0.27
NCSTN-201ENST00000294785 CSNK1DP48730 415 aa13.39□□□□□ -0.27
NCSTN-201ENST00000294785 GATMP50440 423 aa13.39□□□□□ -0.27
NCSTN-201ENST00000294785 PTPN5P54829 565 aa13.39□□□□□ -0.27
NCSTN-201ENST00000294785 PLIN5Q00G26 463 aa13.39□□□□□ -0.27
NCSTN-201ENST00000294785 PHKG1Q16816 387 aa13.39□□□□□ -0.27
NCSTN-201ENST00000294785 HIPK1Q86Z02 1210 aa13.39□□□□□ -0.27
NCSTN-201ENST00000294785 LKAAEAR1Q8TD35 194 aa13.39□□□□□ -0.27
NCSTN-201ENST00000294785 TBC1D20Q96BZ9 403 aa13.39□□□□□ -0.27
NCSTN-201ENST00000294785 FAM210AQ96ND0 272 aa13.39□□□□□ -0.27
NCSTN-201ENST00000294785 AMBRA1Q9C0C7 1298 aa13.39□□□□□ -0.27
NCSTN-201ENST00000294785 LHPPQ9H008 270 aa13.39□□□□□ -0.27
NCSTN-201ENST00000294785 RNF38Q9H0F5 515 aa13.39□□□□□ -0.27
NCSTN-201ENST00000294785 RMND5AQ9H871 391 aa13.39□□□□□ -0.27
NCSTN-201ENST00000294785 TSR3Q9UJK0 312 aaKnown RBP13.39□□□□□ -0.27
NCSTN-201ENST00000294785 A0A096LPI6 279 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 C1orf232A0A0U1RR37 186 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 TMX2-CTNND1H3BSU7 103 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 EIF3FO00303 357 aaPredicted RBP13.38□□□□□ -0.27
NCSTN-201ENST00000294785 FFAR3O14843 346 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 GPR42O15529 346 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 ADAM12O43184 909 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 STK16O75716 305 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 PRKD3O94806 890 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 TRIM16O95361 564 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 PRPS2P11908 318 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 CD247P20963 164 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 OR1D2P34982 312 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 RAD23AP54725 363 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 HMGCS1Q01581 520 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 PON2Q15165 354 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 ATXN7L2Q5T6C5 722 aaPredicted RBP13.38□□□□□ -0.27
NCSTN-201ENST00000294785 TMEM173Q86WV6 379 aaPredicted RBP13.38□□□□□ -0.27
NCSTN-201ENST00000294785 TMEM132CQ8N3T6 1108 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 NUDT8Q8WV74 236 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 TRUB1Q8WWH5 349 aaKnown RBP13.38□□□□□ -0.27
NCSTN-201ENST00000294785 ZNF566Q969W8 418 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 PLEKHA8Q96JA3 519 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 BEGAINQ9BUH8 593 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 ZFP14Q9HCL3 533 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 IL26Q9NPH9 171 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 CRLS1Q9UJA2 301 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 NAALAD2Q9Y3Q0 740 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 ORC6Q9Y5N6 252 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 GLYATL1P3A0A0U1RQE8 302 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 SLC16A6O15403 523 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 CLDN9O95484 217 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 ANXA5P08758 320 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 ELNP15502 786 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 UGT1A1P22309 533 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 UGT1A4P22310 534 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 RYKP34925 604 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 UGT1A3P35503 534 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 UGT1A5P35504 534 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 CLDN8P56748 225 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 BCL2L1Q07817 233 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 BNIP3Q12983 259 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 KCNAB2Q13303 367 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 GGTA1PQ4G0N0 100 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 GRAMD4Q6IC98 578 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 RETSATQ6NUM9 610 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 SPESP1Q6UW49 350 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 SUSD1Q6UWL2 747 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 DBF4BQ8NFT6 615 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 TANKQ92844 425 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 CPPED1Q9BRF8 314 aaPredicted RBP13.38□□□□□ -0.27
NCSTN-201ENST00000294785 SMURF2Q9HAU4 748 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 FARSBQ9NSD9 589 aaKnown RBP13.38□□□□□ -0.27
NCSTN-201ENST00000294785 PRSS21Q9Y6M0 314 aa13.38□□□□□ -0.27
NCSTN-201ENST00000294785 LOC100130705A0A1B0GUX0 176 aa13.37□□□□□ -0.27
NCSTN-201ENST00000294785 LOC730098B7Z3J9 87 aa13.37□□□□□ -0.27
NCSTN-201ENST00000294785 EFEMP2O95967 443 aa13.37□□□□□ -0.27
NCSTN-201ENST00000294785 CCDC159P0C7I6 412 aa13.37□□□□□ -0.27
NCSTN-201ENST00000294785 BCKDHAP12694 445 aa13.37□□□□□ -0.27
NCSTN-201ENST00000294785 ZNF182P17025 639 aaPredicted RBP13.37□□□□□ -0.27
NCSTN-201ENST00000294785 ITGB6P18564 788 aa13.37□□□□□ -0.27
NCSTN-201ENST00000294785 ITIH1P19827 911 aa13.37□□□□□ -0.27
NCSTN-201ENST00000294785 PRPH2P23942 346 aa13.37□□□□□ -0.27
NCSTN-201ENST00000294785 SPAM1P38567 509 aa13.37□□□□□ -0.27
NCSTN-201ENST00000294785 DCTP40126 519 aa13.37□□□□□ -0.27
NCSTN-201ENST00000294785 GDF5P43026 501 aa13.37□□□□□ -0.27
NCSTN-201ENST00000294785 RPS14P62263 151 aaKnown RBP13.37□□□□□ -0.27
NCSTN-201ENST00000294785 ZNF691Q5VV52 312 aa13.37□□□□□ -0.27
NCSTN-201ENST00000294785 DUS1LQ6P1R4 473 aaKnown RBP13.37□□□□□ -0.27
NCSTN-201ENST00000294785 MSANTD1Q6ZTZ1 278 aa13.37□□□□□ -0.27
NCSTN-201ENST00000294785 METTL3Q86U44 580 aaKnown RBP13.37□□□□□ -0.27
NCSTN-201ENST00000294785 ZC3H7AQ8IWR0 971 aaKnown RBP13.37□□□□□ -0.27
NCSTN-201ENST00000294785 GIPC3Q8TF64 312 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms