RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 RNF112Q9ULX5 631 aa16.45■□□□□ 0.22
CPSF4-201ENST00000292476 COMMD3-BMI1R4GMX3 469 aa16.45■□□□□ 0.22
CPSF4-201ENST00000292476 KRBA1A5PL33 1030 aa16.44■□□□□ 0.22
CPSF4-201ENST00000292476 PRORSD1PA6NEY8 169 aa16.44■□□□□ 0.22
CPSF4-201ENST00000292476 GPR39O43194 453 aa16.44■□□□□ 0.22
CPSF4-201ENST00000292476 SMIM18P0DKX4 95 aa16.44■□□□□ 0.22
CPSF4-201ENST00000292476 HSD17B1P14061 328 aa16.44■□□□□ 0.22
CPSF4-201ENST00000292476 GFAPP14136 432 aa16.44■□□□□ 0.22
CPSF4-201ENST00000292476 MSH3P20585 1137 aa16.44■□□□□ 0.22
CPSF4-201ENST00000292476 P2RY2P41231 377 aa16.44■□□□□ 0.22
CPSF4-201ENST00000292476 DPTQ07507 201 aa16.44■□□□□ 0.22
CPSF4-201ENST00000292476 ADRM1Q16186 407 aa16.44■□□□□ 0.22
CPSF4-201ENST00000292476 CNPY1Q3B7I2 92 aa16.44■□□□□ 0.22
CPSF4-201ENST00000292476 MAP7D1Q3KQU3 841 aa16.44■□□□□ 0.22
CPSF4-201ENST00000292476 C6orf10Q5SRN2 563 aa16.44■□□□□ 0.22
CPSF4-201ENST00000292476 ANKS6Q68DC2 871 aa16.44■□□□□ 0.22
CPSF4-201ENST00000292476 MYO1HQ8N1T3 1032 aa16.44■□□□□ 0.22
CPSF4-201ENST00000292476 FBXO39Q8N4B4 442 aa16.44■□□□□ 0.22
CPSF4-201ENST00000292476 SPDYE1Q8NFV5 336 aaPredicted RBP16.44■□□□□ 0.22
CPSF4-201ENST00000292476 LINGO1Q96FE5 620 aa16.44■□□□□ 0.22
CPSF4-201ENST00000292476 ZNF597Q96LX8 424 aa16.44■□□□□ 0.22
CPSF4-201ENST00000292476 C3orf30Q96M34 536 aa16.44■□□□□ 0.22
CPSF4-201ENST00000292476 BOCQ9BWV1 1114 aa16.44■□□□□ 0.22
CPSF4-201ENST00000292476 TRIM4Q9C037 500 aa16.44■□□□□ 0.22
CPSF4-201ENST00000292476 ZCCHC2Q9C0B9 1178 aaKnown RBP16.44■□□□□ 0.22
CPSF4-201ENST00000292476 ABCG8Q9H221 673 aa16.44■□□□□ 0.22
CPSF4-201ENST00000292476 ARMC1Q9NVT9 282 aa16.44■□□□□ 0.22
CPSF4-201ENST00000292476 GID8Q9NWU2 228 aa16.44■□□□□ 0.22
CPSF4-201ENST00000292476 WNT16Q9UBV4 365 aa16.44■□□□□ 0.22
CPSF4-201ENST00000292476 TICRRQ7Z2Z1 1910 aa16.44■□□□□ 0.22
CPSF4-201ENST00000292476 AQP12BA6NM10 295 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 PIP5K1BO14986 540 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 TRIM16O95361 564 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 MLYCDO95822 493 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 FTH1P02794 183 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 ZNF26P17031 533 aaPredicted RBP16.43■□□□□ 0.22
CPSF4-201ENST00000292476 MSX2P35548 267 aaPredicted RBP16.43■□□□□ 0.22
CPSF4-201ENST00000292476 RPL5P46777 297 aaKnown RBP16.43■□□□□ 0.22
CPSF4-201ENST00000292476 SEC13P55735 322 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 CLCQ05315 142 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 PFKFB4Q16877 469 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 KIF19Q2TAC6 998 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 IL23RQ5VWK5 629 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 ADAMTSL2Q86TH1 951 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 DHFR2Q86XF0 187 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 AQP12AQ8IXF9 295 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 CHCHD4Q8N4Q1 142 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 ZBTB2Q8N680 514 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 OR2T34Q8NGX1 318 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 SCAMP4Q969E2 229 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 GLYATL1Q969I3 302 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 ATP6V1E2Q96A05 226 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 NUS1Q96E22 293 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 SH3GL3Q99963 347 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 WRAP53Q9BUR4 548 aaKnown RBP16.43■□□□□ 0.22
CPSF4-201ENST00000292476 OSBPL11Q9BXB4 747 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 VCX3AQ9NNX9 186 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 FADS3Q9Y5Q0 445 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 DYTNA2CJ06 578 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 SUPT3HB4E1H0 165 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 BTN3A1O00481 513 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 SUPT3HO75486 399 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 FAM58BPP0C7Q3 252 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 PRR35P0CG20 571 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 C6P13671 934 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 TCN1P20061 433 aaPredicted RBP16.43■□□□□ 0.22
CPSF4-201ENST00000292476 GSTT1P30711 240 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 CNTN1Q12860 1018 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 DYNC1I2Q13409 638 aaKnown RBP16.43■□□□□ 0.22
CPSF4-201ENST00000292476 PON2Q15165 354 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 RFLNAQ6ZTI6 216 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 CLDN19Q8N6F1 224 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 PACRGLQ8N7B6 248 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 ANKFN1Q8N957 763 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 FLCNQ8NFG4 579 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 EEF1AKMT1Q8WVE0 214 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 EME1Q96AY2 570 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 C8orf4Q9NR00 106 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 HEBP1Q9NRV9 189 aa16.43■□□□□ 0.22
CPSF4-201ENST00000292476 STK25O00506 426 aa16.42■□□□□ 0.22
CPSF4-201ENST00000292476 ANGPT2O15123 496 aa16.42■□□□□ 0.22
CPSF4-201ENST00000292476 RECQL5O94762 991 aaPredicted RBP16.42■□□□□ 0.22
CPSF4-201ENST00000292476 DNTTP04053 509 aa16.42■□□□□ 0.22
CPSF4-201ENST00000292476 EEF1DP29692 281 aaKnown RBP16.42■□□□□ 0.22
CPSF4-201ENST00000292476 WASP42768 502 aa16.42■□□□□ 0.22
CPSF4-201ENST00000292476 SLC7A2P52569 658 aa16.42■□□□□ 0.22
CPSF4-201ENST00000292476 CDH13P55290 713 aa16.42■□□□□ 0.22
CPSF4-201ENST00000292476 TXNL4AP83876 142 aaKnown RBP16.42■□□□□ 0.22
CPSF4-201ENST00000292476 C2orf27AQ580R0 203 aa16.42■□□□□ 0.22
CPSF4-201ENST00000292476 PIP5KL1Q5T9C9 394 aa16.42■□□□□ 0.22
CPSF4-201ENST00000292476 BMP8AQ7Z5Y6 402 aa16.42■□□□□ 0.22
CPSF4-201ENST00000292476 CPNE9Q8IYJ1 553 aa16.42■□□□□ 0.22
CPSF4-201ENST00000292476 ALDH16A1Q8IZ83 802 aa16.42■□□□□ 0.22
CPSF4-201ENST00000292476 FBXL6Q8N531 539 aa16.42■□□□□ 0.22
CPSF4-201ENST00000292476 FAM156AQ8NDB6 213 aa16.42■□□□□ 0.22
CPSF4-201ENST00000292476 EXT2Q93063 718 aa16.42■□□□□ 0.22
CPSF4-201ENST00000292476 TRIM54Q9BYV2 358 aa16.42■□□□□ 0.22
CPSF4-201ENST00000292476 UBAP1Q9NZ09 502 aa16.42■□□□□ 0.22
CPSF4-201ENST00000292476 POLG2Q9UHN1 485 aa16.42■□□□□ 0.22
CPSF4-201ENST00000292476 ITM2BQ9Y287 266 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms