RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 PANX1Q96RD7 426 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 NUSAP1Q9BXS6 441 aaKnown RBP13.15□□□□□ -0.3
SCAF4-201ENST00000286835 FAM126AQ9BYI3 521 aaPredicted RBP13.15□□□□□ -0.3
SCAF4-201ENST00000286835 ABCD2Q9UBJ2 740 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 TAF4O00268 1085 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 OXSR1O95747 527 aaPredicted RBP13.15□□□□□ -0.3
SCAF4-201ENST00000286835 ALOX5P09917 674 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 MTHFD2P13995 350 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 GSTM2P28161 218 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 GJA8P48165 433 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 COPZ1P61923 177 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 ZNF33AQ06730 810 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 HSPA14Q0VDF9 509 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 TTC30BQ8N4P2 665 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 BTN2A3PQ96KV6 586 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 EBPLQ9BY08 206 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 TLR8Q9NR97 1041 aaKnown RBP13.15□□□□□ -0.3
SCAF4-201ENST00000286835 CREBZFQ9NS37 354 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 RNF186Q9NXI6 227 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 TRPM5Q9NZQ8 1165 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 AGO1Q9UL18 857 aaKnown RBP13.15□□□□□ -0.3
SCAF4-201ENST00000286835 TNPO3Q9Y5L0 923 aaKnown RBP13.15□□□□□ -0.3
SCAF4-201ENST00000286835 RAI2Q9Y5P3 530 aa13.15□□□□□ -0.3
SCAF4-201ENST00000286835 PDZK1P1A8MUH7 402 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 H7C4K7 107 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 DLGAP1O14490 977 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 AIREO43918 545 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 CREG1O75629 220 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 KRT6AP02538 564 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 KRT6BP04259 564 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 PSMD8P48556 350 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 KRT6CP48668 564 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 FAM189BP81408 668 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 TUBA3CQ13748 450 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 SMN1Q16637 294 aaKnown RBP13.14□□□□□ -0.31
SCAF4-201ENST00000286835 COLGALT2Q8IYK4 626 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 CLIP4Q8N3C7 705 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 CHDHQ8NE62 594 aaPredicted RBP13.14□□□□□ -0.31
SCAF4-201ENST00000286835 SLC22A17Q8WUG5 538 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 FAR1Q8WVX9 515 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 DERL2Q9GZP9 239 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 LSM7Q9UK45 103 aaKnown RBP13.14□□□□□ -0.31
SCAF4-201ENST00000286835 IKZF3Q9UKT9 509 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 CAPN15O75808 1086 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 MED26O95402 600 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 MT-ND2P03891 347 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 ALPLP05186 524 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 PGRP06401 933 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 EPB42P16452 691 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 RPL9P32969 192 aaKnown RBP13.14□□□□□ -0.31
SCAF4-201ENST00000286835 KCNQ1P51787 676 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 CBLBQ13191 982 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 SPANXN2Q5MJ10 180 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 SMYD5Q6GMV2 418 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 OTOP2Q7RTS6 562 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 HIPK1Q86Z02 1210 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 TAGAPQ8N103 731 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 OR5K1Q8NHB7 308 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 FARSBQ9NSD9 589 aaKnown RBP13.14□□□□□ -0.31
SCAF4-201ENST00000286835 EHD3Q9NZN3 535 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 PCTPQ9UKL6 214 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 ZNF451Q9Y4E5 1061 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 PER2O15055 1255 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 SLC25A14O95258 325 aaPredicted RBP13.14□□□□□ -0.31
SCAF4-201ENST00000286835 PAPSS2O95340 614 aaPredicted RBP13.14□□□□□ -0.31
SCAF4-201ENST00000286835 POU2F1P14859 743 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 OGNP20774 298 aaKnown RBP13.14□□□□□ -0.31
SCAF4-201ENST00000286835 AZGP1P25311 298 aaKnown RBP13.14□□□□□ -0.31
SCAF4-201ENST00000286835 WEE1P30291 646 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 SLC26A3P40879 764 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 ILF2Q12905 390 aaKnown RBP13.14□□□□□ -0.31
SCAF4-201ENST00000286835 BOP1Q14137 746 aaKnown RBP13.14□□□□□ -0.31
SCAF4-201ENST00000286835 CYHR1Q6ZMK1 362 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 GOLGA7Q7Z5G4 137 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 ADAMTSL2Q86TH1 951 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 ZFAND4Q86XD8 727 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 AADATQ8N5Z0 425 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 SCAIQ8N9R8 606 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 PYCR2Q96C36 320 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 NUAK2Q9H093 628 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 DCSTAMPQ9H295 470 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 TPK1Q9H3S4 243 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 INIPQ9NRY2 104 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 FLRT1Q9NZU1 646 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 SH3BP4Q9P0V3 963 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 SPO11Q9Y5K1 396 aa13.14□□□□□ -0.31
SCAF4-201ENST00000286835 CCNKO75909 580 aa13.13□□□□□ -0.31
SCAF4-201ENST00000286835 ZNF7P17097 686 aaPredicted RBP13.13□□□□□ -0.31
SCAF4-201ENST00000286835 SLC11A2P49281 568 aa13.13□□□□□ -0.31
SCAF4-201ENST00000286835 IL10RBQ08334 325 aa13.13□□□□□ -0.31
SCAF4-201ENST00000286835 SCD5Q86SK9 330 aa13.13□□□□□ -0.31
SCAF4-201ENST00000286835 DMRTB1Q96MA1 342 aa13.13□□□□□ -0.31
SCAF4-201ENST00000286835 ASB1Q9Y576 335 aa13.13□□□□□ -0.31
SCAF4-201ENST00000286835 BRWD3Q6RI45 1802 aa13.13□□□□□ -0.31
SCAF4-201ENST00000286835 FFAR2O15552 330 aa13.13□□□□□ -0.31
SCAF4-201ENST00000286835 C7P10643 843 aa13.13□□□□□ -0.31
SCAF4-201ENST00000286835 MAD2L1Q13257 205 aaPredicted RBP13.13□□□□□ -0.31
SCAF4-201ENST00000286835 PIANPQ8IYJ0 282 aa13.13□□□□□ -0.31
SCAF4-201ENST00000286835 Q8N9G6 341 aaPredicted RBP13.13□□□□□ -0.31
SCAF4-201ENST00000286835 SLAIN1Q8ND83 568 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms