RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 ANKRD28O15084 1053 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 EEDO75530 441 aaKnown RBP9.35□□□□□ -0.91
TRIM55-201ENST00000276573 KRT6AP02538 564 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 KRT6BP04259 564 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 GSTM1P09488 218 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 G6PDP11413 515 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 LAMP2P13473 410 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 ACADSP16219 412 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 GDI1P31150 447 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 P2RY2P41231 377 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 GNPDA1P46926 289 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 KRT6CP48668 564 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 SLC7A2P52569 658 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 GTF2A1P52655 376 aaPredicted RBP9.35□□□□□ -0.91
TRIM55-201ENST00000276573 GSTM4Q03013 218 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 PRKG2Q13237 762 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 ADAM15Q13444 863 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 ZNF658BQ4V348 819 aaPredicted RBP9.35□□□□□ -0.91
TRIM55-201ENST00000276573 BCL7AQ4VC05 210 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 SGO1Q5FBB7 561 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 PAGE3Q5JUK9 113 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 EGFLAMQ63HQ2 1017 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 ZFP1Q6P2D0 407 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 CYP20A1Q6UW02 462 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 PARM1Q6UWI2 310 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 SLC15A3Q8IY34 581 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 RGL4Q8IZJ4 473 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 LILRA3Q8N6C8 439 aaPredicted RBP9.35□□□□□ -0.91
TRIM55-201ENST00000276573 L3MBTL4Q8NA19 623 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 RAB7BQ96AH8 199 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 VPS33AQ96AX1 596 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 PYCR2Q96C36 320 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 LRRC58Q96CX6 371 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 MTFMTQ96DP5 389 aaKnown RBP9.35□□□□□ -0.91
TRIM55-201ENST00000276573 SLC39A3Q9BRY0 314 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 PCDHAC1Q9H158 963 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 S1PR5Q9H228 398 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 TRIM39Q9HCM9 518 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 LEF1Q9UJU2 399 aaPredicted RBP9.35□□□□□ -0.91
TRIM55-201ENST00000276573 SLC22A14Q9Y267 594 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 FADS3Q9Y5Q0 445 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 TCF20Q9UGU0 1960 aaKnown RBP9.35□□□□□ -0.91
TRIM55-201ENST00000276573 KCNE1BA0A087WTH5 132 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 DYTNA2CJ06 578 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 KRT87PA6NCN2 255 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 ARHGEF33A8MVX0 844 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 FXYD1O00168 92 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 NME4O00746 187 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 LILRB5O75023 590 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 APODP05090 189 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 SLC6A2P23975 617 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 MAP4P27816 1152 aaKnown RBP9.35□□□□□ -0.91
TRIM55-201ENST00000276573 PDHA2P29803 388 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 PREPP48147 710 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 ATXN3P54252 364 aaPredicted RBP9.35□□□□□ -0.91
TRIM55-201ENST00000276573 PFN3P60673 137 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 MRPS22P82650 360 aaKnown RBP9.35□□□□□ -0.91
TRIM55-201ENST00000276573 HMGCS1Q01581 520 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 FOXM1Q08050 763 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 CNTN1Q12860 1018 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 MAD2L1Q13257 205 aaPredicted RBP9.35□□□□□ -0.91
TRIM55-201ENST00000276573 CPSF6Q16630 551 aaKnown RBP eCLIP9.35□□□□□ -0.91
TRIM55-201ENST00000276573 ITPRIPL2Q3MIP1 535 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 GGTA1PQ4G0N0 100 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 SYTL3Q4VX76 610 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 FAM46CQ5VWP2 391 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 RAET1GQ6H3X3 334 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 NUDT18Q6ZVK8 323 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 TRIM74Q86UV6 250 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 ZFAND4Q86XD8 727 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 KBTBD2Q8IY47 623 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 SLC22A15Q8IZD6 547 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 CXorf40AQ8TE69 158 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 ERLEC1Q96DZ1 483 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 CCDC138Q96M89 665 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 RPP25Q9BUL9 199 aaKnown RBP9.35□□□□□ -0.91
TRIM55-201ENST00000276573 ATG10Q9H0Y0 220 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 OR2AG1Q9H205 316 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 ACTL8Q9H568 366 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 CLEC1BQ9P126 229 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 ATXN10Q9UBB4 475 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 EPS15L1Q9UBC2 864 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 ABCD2Q9UBJ2 740 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 GULP1Q9UBP9 304 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 EIF3LQ9Y262 564 aaKnown RBP9.35□□□□□ -0.91
TRIM55-201ENST00000276573 STON1Q9Y6Q2 735 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 KIAA1549LQ6ZVL6 1849 aa9.35□□□□□ -0.91
TRIM55-201ENST00000276573 ARNTLO00327 626 aa9.34□□□□□ -0.91
TRIM55-201ENST00000276573 IFRD1O00458 451 aaPredicted RBP9.34□□□□□ -0.91
TRIM55-201ENST00000276573 LIN7AO14910 233 aaPredicted RBP9.34□□□□□ -0.91
TRIM55-201ENST00000276573 CASQ2O14958 399 aaPredicted RBP9.34□□□□□ -0.91
TRIM55-201ENST00000276573 NPC1O15118 1278 aa9.34□□□□□ -0.91
TRIM55-201ENST00000276573 PRAMEF4O60810 478 aa9.34□□□□□ -0.91
TRIM55-201ENST00000276573 SEC22BO75396 215 aa9.34□□□□□ -0.91
TRIM55-201ENST00000276573 RSL1D1O76021 490 aaKnown RBP9.34□□□□□ -0.91
TRIM55-201ENST00000276573 NPPAP01160 153 aa9.34□□□□□ -0.91
TRIM55-201ENST00000276573 PDYNP01213 254 aa9.34□□□□□ -0.91
TRIM55-201ENST00000276573 CATP04040 527 aaKnown RBP9.34□□□□□ -0.91
TRIM55-201ENST00000276573 ITPKAP23677 461 aa9.34□□□□□ -0.91
TRIM55-201ENST00000276573 PBLDP30039 288 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms