RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 CD40LGP29965 261 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 WEE1P30291 646 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 ETFBP38117 255 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 YAP1P46937 504 aaKnown RBP10.14□□□□□ -0.79
UPF3B-201ENST00000276201 GSSP48637 474 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 PPP2R2BQ00005 443 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 TAF10Q12962 218 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 LCP2Q13094 533 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 ZNF362Q5T0B9 420 aaPredicted RBP10.14□□□□□ -0.79
UPF3B-201ENST00000276201 TMEM207Q6UWW9 146 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 VITQ6UXI7 678 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 ZNF555Q8NEP9 628 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 TMBIM1Q969X1 311 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 TBC1D20Q96BZ9 403 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 YIPF6Q96EC8 236 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 ZNF599Q96NL3 588 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 DACH2Q96NX9 599 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 ATOH8Q96SQ7 321 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 MBOAT4Q96T53 435 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 RBM4BQ9BQ04 359 aaKnown RBP10.14□□□□□ -0.79
UPF3B-201ENST00000276201 RBM4Q9BWF3 364 aaKnown RBP10.14□□□□□ -0.79
UPF3B-201ENST00000276201 UGT2B28Q9BY64 529 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 SLC25A51Q9H1U9 297 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 WDCPQ9H6R7 721 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 ALG9Q9H6U8 611 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 ATP13A3Q9H7F0 1226 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 IL1RL2Q9HB29 575 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 COMMD8Q9NX08 183 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 DDIT4Q9NX09 232 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 KLHL3Q9UH77 587 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 BAG5Q9UL15 447 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 IFT52Q9Y366 437 aa10.14□□□□□ -0.79
UPF3B-201ENST00000276201 C2orf78A6NCI8 922 aa10.13□□□□□ -0.79
UPF3B-201ENST00000276201 YJEFN3A6XGL0 299 aa10.13□□□□□ -0.79
UPF3B-201ENST00000276201 HEPACAM2A8MVW5 462 aa10.13□□□□□ -0.79
UPF3B-201ENST00000276201 STX16O14662 325 aa10.13□□□□□ -0.79
UPF3B-201ENST00000276201 GPR37L1O60883 481 aa10.13□□□□□ -0.79
UPF3B-201ENST00000276201 NDUFS2O75306 463 aa10.13□□□□□ -0.79
UPF3B-201ENST00000276201 OXSR1O95747 527 aaPredicted RBP10.13□□□□□ -0.79
UPF3B-201ENST00000276201 ITGAMP11215 1152 aa10.13□□□□□ -0.79
UPF3B-201ENST00000276201 HGFP14210 728 aa10.13□□□□□ -0.79
UPF3B-201ENST00000276201 GGT1P19440 569 aa10.13□□□□□ -0.79
UPF3B-201ENST00000276201 KCNC1P48547 511 aa10.13□□□□□ -0.79
UPF3B-201ENST00000276201 RAD23AP54725 363 aa10.13□□□□□ -0.79
UPF3B-201ENST00000276201 GP2P55259 537 aaKnown RBP10.13□□□□□ -0.79
UPF3B-201ENST00000276201 CXCR4P61073 352 aa10.13□□□□□ -0.79
UPF3B-201ENST00000276201 INAQ16352 499 aa10.13□□□□□ -0.79
UPF3B-201ENST00000276201 BRMS1LQ5PSV4 323 aa10.13□□□□□ -0.79
UPF3B-201ENST00000276201 SLX4IPQ5VYV7 408 aa10.13□□□□□ -0.79
UPF3B-201ENST00000276201 ZFAND4Q86XD8 727 aa10.13□□□□□ -0.79
UPF3B-201ENST00000276201 CMTM8Q8IZV2 173 aa10.13□□□□□ -0.79
UPF3B-201ENST00000276201 PTGR2Q8N8N7 351 aaPredicted RBP10.13□□□□□ -0.79
UPF3B-201ENST00000276201 ATP6V0D2Q8N8Y2 350 aa10.13□□□□□ -0.79
UPF3B-201ENST00000276201 OR8J3Q8NGG0 315 aa10.13□□□□□ -0.79
UPF3B-201ENST00000276201 PTERQ96BW5 349 aa10.13□□□□□ -0.79
UPF3B-201ENST00000276201 LRRC3BQ96PB8 259 aa10.13□□□□□ -0.79
UPF3B-201ENST00000276201 SLC22A12Q96S37 553 aa10.13□□□□□ -0.79
UPF3B-201ENST00000276201 MID1IP1Q9NPA3 183 aa10.13□□□□□ -0.79
UPF3B-201ENST00000276201 SLC2A4RGQ9NR83 387 aa10.13□□□□□ -0.79
UPF3B-201ENST00000276201 TRPM5Q9NZQ8 1165 aa10.13□□□□□ -0.79
UPF3B-201ENST00000276201 ZMYM5Q9UJ78 669 aa10.13□□□□□ -0.79
UPF3B-201ENST00000276201 ERVW-1Q9UQF0 538 aa10.13□□□□□ -0.79
UPF3B-201ENST00000276201 TMEM98Q9Y2Y6 226 aa10.13□□□□□ -0.79
UPF3B-201ENST00000276201 TSC22D4Q9Y3Q8 395 aa10.13□□□□□ -0.79
UPF3B-201ENST00000276201 A3GALT2U3KPV4 340 aa10.13□□□□□ -0.79
UPF3B-201ENST00000276201 SYNJ2BP-COX16A0A087WUM0 186 aa10.12□□□□□ -0.79
UPF3B-201ENST00000276201 ATP6AP2A0A1C7CYW4 349 aa10.12□□□□□ -0.79
UPF3B-201ENST00000276201 FAM92AA1XBS5 289 aa10.12□□□□□ -0.79
UPF3B-201ENST00000276201 ZNF840PA6NDX5 716 aa10.12□□□□□ -0.79
UPF3B-201ENST00000276201 CCDC154A6NI56 674 aa10.12□□□□□ -0.79
UPF3B-201ENST00000276201 RGS13O14921 159 aa10.12□□□□□ -0.79
UPF3B-201ENST00000276201 AURKAO14965 403 aa10.12□□□□□ -0.79
UPF3B-201ENST00000276201 KLK8O60259 260 aa10.12□□□□□ -0.79
UPF3B-201ENST00000276201 SLC22A3O75751 556 aa10.12□□□□□ -0.79
UPF3B-201ENST00000276201 ATP6AP2O75787 350 aa10.12□□□□□ -0.79
UPF3B-201ENST00000276201 MT-CYBP00156 380 aaPredicted RBP10.12□□□□□ -0.79
UPF3B-201ENST00000276201 RPS17P08708 135 aaKnown RBP10.12□□□□□ -0.79
UPF3B-201ENST00000276201 MTHFD2P13995 350 aa10.12□□□□□ -0.79
UPF3B-201ENST00000276201 JUNDP17535 347 aa10.12□□□□□ -0.79
UPF3B-201ENST00000276201 SERPINH1P50454 418 aaKnown RBP10.12□□□□□ -0.79
UPF3B-201ENST00000276201 POLR2JP52435 117 aaKnown RBP10.12□□□□□ -0.79
UPF3B-201ENST00000276201 PLK1P53350 603 aa10.12□□□□□ -0.79
UPF3B-201ENST00000276201 CDKN2DP55273 166 aa10.12□□□□□ -0.79
UPF3B-201ENST00000276201 ERVK-8P63133 956 aa10.12□□□□□ -0.79
UPF3B-201ENST00000276201 CHRNB3Q05901 458 aa10.12□□□□□ -0.79
UPF3B-201ENST00000276201 FADDQ13158 208 aa10.12□□□□□ -0.79
UPF3B-201ENST00000276201 KCNJ8Q15842 424 aa10.12□□□□□ -0.79
UPF3B-201ENST00000276201 HIST2H2ACQ16777 129 aaPredicted RBP10.12□□□□□ -0.79
UPF3B-201ENST00000276201 DPY19L1Q2PZI1 675 aa10.12□□□□□ -0.79
UPF3B-201ENST00000276201 ZNF789Q5FWF6 425 aa10.12□□□□□ -0.79
UPF3B-201ENST00000276201 TMEM31Q5JXX7 168 aa10.12□□□□□ -0.79
UPF3B-201ENST00000276201 ARTNQ5T4W7 220 aa10.12□□□□□ -0.79
UPF3B-201ENST00000276201 ZNF691Q5VV52 312 aa10.12□□□□□ -0.79
UPF3B-201ENST00000276201 GLYATQ6IB77 296 aa10.12□□□□□ -0.79
UPF3B-201ENST00000276201 SLC2A7Q6PXP3 512 aa10.12□□□□□ -0.79
UPF3B-201ENST00000276201 RPS27LQ71UM5 84 aaKnown RBP10.12□□□□□ -0.79
UPF3B-201ENST00000276201 CHST15Q7LFX5 561 aaPredicted RBP10.12□□□□□ -0.79
UPF3B-201ENST00000276201 OR13J1Q8NGT2 312 aa10.12□□□□□ -0.79
UPF3B-201ENST00000276201 FBXO32Q969P5 355 aa10.12□□□□□ -0.79
UPF3B-201ENST00000276201 TADA1Q96BN2 335 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms