RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 NAPRTQ6XQN6 538 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 SNX20Q7Z614 316 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 CCDC50Q8IVM0 306 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 FAM20CQ8IXL6 584 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 RCOR2Q8IZ40 523 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 LINC00528Q8N1L1 170 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 CLDN19Q8N6F1 224 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 LMNTD1Q8N9Z9 388 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 GLIS1Q8NBF1 620 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 OR5AR1Q8NGP9 310 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 CPT1BQ92523 772 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 GBP5Q96PP8 586 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 OR2A14Q96R47 310 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 HGH1Q9BTY7 390 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 SPRTNQ9H040 489 aaPredicted RBP8.66□□□□□ -1.02
TPM3-201ENST00000271850 TFB2MQ9H5Q4 396 aaKnown RBP8.66□□□□□ -1.02
TPM3-201ENST00000271850 ACTR5Q9H9F9 607 aaPredicted RBP8.66□□□□□ -1.02
TPM3-201ENST00000271850 ZBTB20Q9HC78 741 aaPredicted RBP8.66□□□□□ -1.02
TPM3-201ENST00000271850 SLC22A11Q9NSA0 550 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 ZNHIT6Q9NWK9 470 aaKnown RBP8.66□□□□□ -1.02
TPM3-201ENST00000271850 PIH1D1Q9NWS0 290 aaKnown RBP8.66□□□□□ -1.02
TPM3-201ENST00000271850 ACTR10Q9NZ32 417 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 CRLS1Q9UJA2 301 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 SNX7Q9UNH6 387 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 POLEQ07864 2286 aa8.66□□□□□ -1.02
TPM3-201ENST00000271850 PCM1Q15154 2024 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 A0A0U1RQJ8 604 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 A1L4Q6 167 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 WIPF3A6NGB9 483 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 OR51F1A6NGY5 319 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 A6NL46 340 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 C2orf81A6NN90 581 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 AKR1B15C9JRZ8 316 aaPredicted RBP8.65□□□□□ -1.02
TPM3-201ENST00000271850 KCNN4O15554 427 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 VPS4BO75351 444 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 ANXA9O76027 345 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 AGFG2O95081 481 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 METTL18O95568 372 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 UMODP07911 640 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 RBP3P10745 1247 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 PYGMP11217 842 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 UGT2B7P16662 529 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 TPH1P17752 444 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 PSMA3P25788 255 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 NDUFS1P28331 727 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 PTPN7P35236 360 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 ARL4DP49703 201 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 PLEKHN1Q494U1 663 aaPredicted RBP8.65□□□□□ -1.02
TPM3-201ENST00000271850 FHL5Q5TD97 284 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 SPESP1Q6UW49 350 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 MRGPREQ86SM8 312 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 SERPINA9Q86WD7 417 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 SVOPQ8N4V2 548 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 RNF214Q8ND24 703 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 SSC4DQ8WTU2 575 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 LCN9Q8WX39 176 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 SEC14L1Q92503 715 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 SNRNP40Q96DI7 357 aaKnown RBP8.65□□□□□ -1.02
TPM3-201ENST00000271850 CLIP3Q96DZ5 547 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 RBM41Q96IZ5 413 aaKnown RBP8.65□□□□□ -1.02
TPM3-201ENST00000271850 SPATA13Q96N96 652 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 FERD3LQ96RJ6 166 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 COPS8Q99627 209 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 TBL1YQ9BQ87 522 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 MESP1Q9BRJ9 268 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 CCM2Q9BSQ5 444 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 MENTQ9BUN1 341 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 OSBPL8Q9BZF1 889 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 SRMSQ9H3Y6 488 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 LRRC4CQ9HCJ2 640 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 ZDHHC3Q9NYG2 299 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 ERRFI1Q9UJM3 462 aaPredicted RBP8.65□□□□□ -1.02
TPM3-201ENST00000271850 VPS4AQ9UN37 437 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 NTNG1Q9Y2I2 539 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 R3HDM2Q9Y2K5 976 aaKnown RBP8.65□□□□□ -1.02
TPM3-201ENST00000271850 PCDHA3Q9Y5H8 950 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 PCDHA13Q9Y5I0 950 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 CSAG2Q9Y5P2 127 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 COLEC10Q9Y6Z7 277 aa8.65□□□□□ -1.02
TPM3-201ENST00000271850 CACNA1DQ01668 2161 aa8.65□□□□□ -1.03
TPM3-201ENST00000271850 TCRBV7S2A1N4TA0A589 114 aa8.64□□□□□ -1.03
TPM3-201ENST00000271850 CCDC78A2IDD5 438 aa8.64□□□□□ -1.03
TPM3-201ENST00000271850 KLHL33A6NCF5 533 aa8.64□□□□□ -1.03
TPM3-201ENST00000271850 SOWAHDA6NJG2 315 aa8.64□□□□□ -1.03
TPM3-201ENST00000271850 E7EQ34 232 aa8.64□□□□□ -1.03
TPM3-201ENST00000271850 CBFA2T2O43439 604 aa8.64□□□□□ -1.03
TPM3-201ENST00000271850 LDLRP01130 860 aa8.64□□□□□ -1.03
TPM3-201ENST00000271850 TPM3P06753 285 aa8.64□□□□□ -1.03
TPM3-201ENST00000271850 KLK3P07288 261 aaPredicted RBP8.64□□□□□ -1.03
TPM3-201ENST00000271850 ITGALP20701 1170 aa8.64□□□□□ -1.03
TPM3-201ENST00000271850 FOXN2P32314 431 aa8.64□□□□□ -1.03
TPM3-201ENST00000271850 CD151P48509 253 aa8.64□□□□□ -1.03
TPM3-201ENST00000271850 EIF3EP60228 445 aaKnown RBP8.64□□□□□ -1.03
TPM3-201ENST00000271850 PDE1BQ01064 536 aa8.64□□□□□ -1.03
TPM3-201ENST00000271850 GRB7Q14451 532 aa8.64□□□□□ -1.03
TPM3-201ENST00000271850 ODF2Q5BJF6 829 aa8.64□□□□□ -1.03
TPM3-201ENST00000271850 TMTC4Q5T4D3 741 aa8.64□□□□□ -1.03
TPM3-201ENST00000271850 C1orf189Q5VU69 101 aa8.64□□□□□ -1.03
TPM3-201ENST00000271850 ITPRIPL1Q6GPH6 555 aa8.64□□□□□ -1.03
TPM3-201ENST00000271850 ARMC6Q6NXE6 501 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms