RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 IL6P05231 212 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 RETP07949 1114 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 EBLN1P0CF75 366 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 CTPS1P17812 591 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 NFKBIAP25963 317 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 PTPN6P29350 595 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 AKT1P31749 480 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 GDF5P43026 501 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 IST1P53990 364 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 AP1S1P61966 158 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 FPGSQ05932 587 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 MAD2L1Q13257 205 aaPredicted RBP12.18□□□□□ -0.46
BEST3-201ENST00000266661 NFATC2Q13469 925 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 C16orf72Q14CZ0 275 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 CTU2Q2VPK5 515 aaKnown RBP12.18□□□□□ -0.46
BEST3-201ENST00000266661 FAM174BQ3ZCQ3 159 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 SPANXN4Q5MJ08 99 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 C6orf141Q5SZD1 244 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 BROXQ5VW32 411 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 TTC23Q5W5X9 447 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 ATG9BQ674R7 924 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 ANKRD34AQ69YU3 496 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 PTRHD1Q6GMV3 140 aaKnown RBP12.18□□□□□ -0.46
BEST3-201ENST00000266661 SNX20Q7Z614 316 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 TMEM179BQ7Z7N9 219 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 ZDHHC13Q8IUH4 622 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 RGL4Q8IZJ4 473 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 ABI1Q8IZP0 508 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 RBFAQ8N0V3 343 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 SPARTQ8N0X7 666 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 ADAMTS19Q8TE59 1207 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 CPPED1Q9BRF8 314 aaPredicted RBP12.18□□□□□ -0.46
BEST3-201ENST00000266661 C17orf80Q9BSJ5 609 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 VN1R3Q9BXE9 311 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 GPR63Q9BZJ6 419 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 CLPBQ9H078 707 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 FANCEQ9HB96 536 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 LTB4R2Q9NPC1 389 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 SERHLQ9NQF3 203 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 HPS4Q9NQG7 708 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 DCAF13Q9NV06 445 aaKnown RBP12.18□□□□□ -0.46
BEST3-201ENST00000266661 CXXC1Q9P0U4 656 aaPredicted RBP12.18□□□□□ -0.46
BEST3-201ENST00000266661 ADGRE2Q9UHX3 823 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 VPS51Q9UID3 782 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 AP3M1Q9Y2T2 418 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 FCF1Q9Y324 198 aaKnown RBP12.18□□□□□ -0.46
BEST3-201ENST00000266661 BACE2Q9Y5Z0 518 aa12.18□□□□□ -0.46
BEST3-201ENST00000266661 SCN8AQ9UQD0 1980 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 ELOVL7A1L3X0 281 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 C2orf78A6NCI8 922 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 GOLGA8CPA6NN73 597 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 LOC730098B7Z3J9 87 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 G3V2T6 193 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 K7EPI3 171 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 CXCR6O00574 342 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 PFDN1O60925 122 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 SLC25A14O95258 325 aaPredicted RBP12.17□□□□□ -0.46
BEST3-201ENST00000266661 PRAMEF1O95521 474 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 LATS1O95835 1130 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 S100BP04271 92 aaPredicted RBP12.17□□□□□ -0.46
BEST3-201ENST00000266661 PGRP06401 933 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 DGKAP23743 735 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 PIGAP37287 484 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 GNPDA1P46926 289 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 GABARAPL2P60520 117 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 RHOAP61586 193 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 HMGCS1Q01581 520 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 PON2Q15165 354 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 MAPKAPK3Q16644 382 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 MOGQ16653 247 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 GTDC1Q4AE62 458 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 ARMC12Q5T9G4 340 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 FAM151BQ6UXP7 276 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 CHRDL2Q6WN34 429 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 R3HCC1LQ7Z5L2 792 aaKnown RBP12.17□□□□□ -0.46
BEST3-201ENST00000266661 RBM23Q86U06 439 aaKnown RBP12.17□□□□□ -0.46
BEST3-201ENST00000266661 MICU2Q8IYU8 434 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 HS3ST5Q8IZT8 346 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 C8orf59Q8N0T1 100 aaPredicted RBP12.17□□□□□ -0.46
BEST3-201ENST00000266661 C10orf111Q8N326 155 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 LIX1Q8N485 282 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 CLDN19Q8N6F1 224 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 KRTCAP2Q8N6L1 136 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 SMYD1Q8NB12 490 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 WFDC5Q8TCV5 224 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 FIG4Q92562 907 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 BORCS5Q969J3 196 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 MYO19Q96H55 970 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 ZBTB18Q99592 522 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 LHPPQ9H008 270 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 NACA2Q9H009 215 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 MAGIXQ9H6Y5 334 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 ACTR8Q9H981 624 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 TMEFF2Q9UIK5 374 aaPredicted RBP12.17□□□□□ -0.46
BEST3-201ENST00000266661 GNPTGQ9UJJ9 305 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 FAF1Q9UNN5 650 aaPredicted RBP12.17□□□□□ -0.46
BEST3-201ENST00000266661 REV3LO60673 3130 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 FAM220BPB1ANY3 271 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 NPIPB8E9PQR5 432 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 K7ERQ8 282 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms