RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 PTCHD4Q6ZW05 846 aa15.12■□□□□ 0.01
TIMP3-201ENST00000266085 CBR4Q8N4T8 237 aa15.12■□□□□ 0.01
TIMP3-201ENST00000266085 ARL10Q8N8L6 244 aa15.12■□□□□ 0.01
TIMP3-201ENST00000266085 RBM4BQ9BQ04 359 aaKnown RBP15.12■□□□□ 0.01
TIMP3-201ENST00000266085 RBM4Q9BWF3 364 aaKnown RBP15.12■□□□□ 0.01
TIMP3-201ENST00000266085 RAB11FIP5Q9BXF6 653 aa15.12■□□□□ 0.01
TIMP3-201ENST00000266085 EPB41L1Q9H4G0 881 aa15.12■□□□□ 0.01
TIMP3-201ENST00000266085 ARHGEF3Q9NR81 526 aa15.12■□□□□ 0.01
TIMP3-201ENST00000266085 SUCOQ9UBS9 1254 aaKnown RBP15.12■□□□□ 0.01
TIMP3-201ENST00000266085 TAF1P21675 1872 aa15.12■□□□□ 0.01
TIMP3-201ENST00000266085 MYH8P13535 1937 aa15.12■□□□□ 0.01
TIMP3-201ENST00000266085 RHPN2P1A8MT19 583 aa15.12■□□□□ 0.01
TIMP3-201ENST00000266085 SCN2BO60939 215 aa15.12■□□□□ 0.01
TIMP3-201ENST00000266085 RB1P06400 928 aa15.12■□□□□ 0.01
TIMP3-201ENST00000266085 ATP1B2P14415 290 aaPredicted RBP15.12■□□□□ 0.01
TIMP3-201ENST00000266085 DNAJB1P25685 340 aa15.12■□□□□ 0.01
TIMP3-201ENST00000266085 CLCNKAP51800 687 aa15.12■□□□□ 0.01
TIMP3-201ENST00000266085 AFF1P51825 1210 aaKnown RBP15.12■□□□□ 0.01
TIMP3-201ENST00000266085 PRR5P85299 388 aa15.12■□□□□ 0.01
TIMP3-201ENST00000266085 DCTN2Q13561 401 aaKnown RBP15.12■□□□□ 0.01
TIMP3-201ENST00000266085 LARS2Q15031 903 aaKnown RBP15.12■□□□□ 0.01
TIMP3-201ENST00000266085 EEF1AKMT1Q8WVE0 214 aa15.12■□□□□ 0.01
TIMP3-201ENST00000266085 SPHK2Q9NRA0 654 aa15.12■□□□□ 0.01
TIMP3-201ENST00000266085 SMPD3Q9NY59 655 aaPredicted RBP15.12■□□□□ 0.01
TIMP3-201ENST00000266085 IFT80Q9P2H3 777 aaPredicted RBP15.12■□□□□ 0.01
TIMP3-201ENST00000266085 RAPGEFL1Q9UHV5 662 aa15.12■□□□□ 0.01
TIMP3-201ENST00000266085 MRTO4Q9UKD2 239 aaKnown RBP15.12■□□□□ 0.01
TIMP3-201ENST00000266085 M0QZQ0 153 aa15.12■□□□□ 0.01
TIMP3-201ENST00000266085 KPNA4O00629 521 aaPredicted RBP15.12■□□□□ 0.01
TIMP3-201ENST00000266085 FANCGO15287 622 aa15.12■□□□□ 0.01
TIMP3-201ENST00000266085 IGFBP5P24593 272 aa15.12■□□□□ 0.01
TIMP3-201ENST00000266085 C1QTNF8P60827 252 aa15.12■□□□□ 0.01
TIMP3-201ENST00000266085 NFKB2Q00653 900 aa15.12■□□□□ 0.01
TIMP3-201ENST00000266085 SCAPQ12770 1279 aa15.12■□□□□ 0.01
TIMP3-201ENST00000266085 TEAD4Q15561 434 aa15.12■□□□□ 0.01
TIMP3-201ENST00000266085 ZBTB6Q15916 424 aa15.12■□□□□ 0.01
TIMP3-201ENST00000266085 ELOVL2Q9NXB9 296 aa15.12■□□□□ 0.01
TIMP3-201ENST00000266085 MFN2O95140 757 aa15.11■□□□□ 0.01
TIMP3-201ENST00000266085 FABP3P05413 133 aa15.11■□□□□ 0.01
TIMP3-201ENST00000266085 RGS8P57771 180 aaPredicted RBP15.11■□□□□ 0.01
TIMP3-201ENST00000266085 ZNF252P-AS1Q0IIN9 211 aa15.11■□□□□ 0.01
TIMP3-201ENST00000266085 HSPB3Q12988 150 aa15.11■□□□□ 0.01
TIMP3-201ENST00000266085 ZNF776Q68DI1 518 aaPredicted RBP15.11■□□□□ 0.01
TIMP3-201ENST00000266085 ZNF57Q68EA5 555 aaPredicted RBP15.11■□□□□ 0.01
TIMP3-201ENST00000266085 KBTBD2Q8IY47 623 aa15.11■□□□□ 0.01
TIMP3-201ENST00000266085 RBM18Q96H35 190 aaKnown RBP15.11■□□□□ 0.01
TIMP3-201ENST00000266085 REXO4Q9GZR2 422 aaKnown RBP15.11■□□□□ 0.01
TIMP3-201ENST00000266085 AK5Q9Y6K8 562 aa15.11■□□□□ 0.01
TIMP3-201ENST00000266085 TOP3BO95985 862 aaKnown RBP15.11■□□□□ 0.01
TIMP3-201ENST00000266085 HSD17B2P37059 387 aa15.11■□□□□ 0.01
TIMP3-201ENST00000266085 CREB5Q02930 508 aa15.11■□□□□ 0.01
TIMP3-201ENST00000266085 LMAN2Q12907 356 aa15.11■□□□□ 0.01
TIMP3-201ENST00000266085 GPRC6AQ5T6X5 926 aa15.11■□□□□ 0.01
TIMP3-201ENST00000266085 DPY19L3Q6ZPD9 716 aa15.11■□□□□ 0.01
TIMP3-201ENST00000266085 LRRTM4Q86VH4 590 aa15.11■□□□□ 0.01
TIMP3-201ENST00000266085 KBTBD8Q8NFY9 601 aa15.11■□□□□ 0.01
TIMP3-201ENST00000266085 ZHX1-C8orf76Q96EF9 292 aa15.11■□□□□ 0.01
TIMP3-201ENST00000266085 IMP4Q96G21 291 aaKnown RBP15.11■□□□□ 0.01
TIMP3-201ENST00000266085 OR52B2Q96RD2 323 aa15.11■□□□□ 0.01
TIMP3-201ENST00000266085 DUSP26Q9BV47 211 aa15.11■□□□□ 0.01
TIMP3-201ENST00000266085 TOR4AQ9NXH8 423 aa15.11■□□□□ 0.01
TIMP3-201ENST00000266085 SLX4Q8IY92 1834 aa15.11■□□□□ 0.01
TIMP3-201ENST00000266085 H0YGN5 161 aa15.11■□□□□ 0.01
TIMP3-201ENST00000266085 RPS9P46781 194 aaKnown RBP15.11■□□□□ 0.01
TIMP3-201ENST00000266085 ITPRIPL2Q3MIP1 535 aa15.11■□□□□ 0.01
TIMP3-201ENST00000266085 CRISPLD1Q9H336 500 aa15.11■□□□□ 0.01
TIMP3-201ENST00000266085 AKTIPQ9H8T0 292 aa15.11■□□□□ 0.01
TIMP3-201ENST00000266085 VPS29Q9UBQ0 182 aa15.11■□□□□ 0.01
TIMP3-201ENST00000266085 PRDM4Q9UKN5 801 aa15.11■□□□□ 0.01
TIMP3-201ENST00000266085 HEBP2Q9Y5Z4 205 aa15.11■□□□□ 0.01
TIMP3-201ENST00000266085 NFS1Q9Y697 457 aa15.11■□□□□ 0.01
TIMP3-201ENST00000266085 LRRC14BA6NHZ5 514 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 UGT2B11O75310 529 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 ERN1O75460 977 aaKnown RBP15.1■□□□□ 0.01
TIMP3-201ENST00000266085 PRPS1L1P21108 318 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 RAB33AQ14088 237 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 GPR107Q5VW38 600 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 TP53INP2Q8IXH6 220 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 DNAJB8Q8NHS0 232 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 RASSF5Q8WWW0 418 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 NSMCE3Q96MG7 304 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 PTGFRNQ9P2B2 879 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 SLCO3A1Q9UIG8 710 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 CFAP20Q9Y6A4 193 aaKnown RBP15.1■□□□□ 0.01
TIMP3-201ENST00000266085 GLI3P10071 1580 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 A0A0G2JN53 185 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 ZBTB42B2RXF5 422 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 TNFRSF11BO00300 401 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 ADAMDEC1O15204 470 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 THRBP10828 461 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 PAX7P23759 505 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 BMPR1AP36894 532 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 MTPNP58546 118 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 MED22Q15528 200 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 KLHL12Q53G59 568 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 FAM43BQ6ZT52 329 aaPredicted RBP15.1■□□□□ 0.01
TIMP3-201ENST00000266085 GALNT5Q7Z7M9 940 aa15.1■□□□□ 0.01
TIMP3-201ENST00000266085 SAMD14Q8IZD0 417 aaPredicted RBP15.1■□□□□ 0.01
TIMP3-201ENST00000266085 ZBED6CLQ96FA7 236 aaPredicted RBP15.1■□□□□ 0.01
TIMP3-201ENST00000266085 SLC22A14Q9Y267 594 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms